Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC006566.1-201ENST00000608943 513 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 AL773524.1-201ENST00000614065 229 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 AL359314.1-201ENST00000616913 261 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 AC091932.3-201ENST00000624223 323 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 AC009161.2-201ENST00000624626 138 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 CENPCP1-201ENST00000533085 2578 ntBASIC1.64□□□□□ -2.15
FOXC2Q99958 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
FOXC2Q99958 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
FOXC2Q99958 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.64□□□□□ -2.15
FOXC2Q99958 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.63□□□□□ -2.15
FOXC2Q99958 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.63□□□□□ -2.15
FOXC2Q99958 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
FOXC2Q99958 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
FOXC2Q99958 Y_RNA.51-201ENST00000362725 102 ntBASIC1.63□□□□□ -2.15
FOXC2Q99958 SNORD3E-201ENST00000362899 217 ntBASIC1.63□□□□□ -2.15
FOXC2Q99958 RNU6-384P-201ENST00000364900 104 ntBASIC1.63□□□□□ -2.15
FOXC2Q99958 RNA5SP138-201ENST00000365098 114 ntBASIC1.63□□□□□ -2.15
FOXC2Q99958 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
FOXC2Q99958 RNU6-641P-201ENST00000384006 107 ntBASIC1.63□□□□□ -2.15
FOXC2Q99958 MIR1-2-201ENST00000384961 85 ntBASIC1.63□□□□□ -2.15
FOXC2Q99958 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.63□□□□□ -2.15
FOXC2Q99958 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
FOXC2Q99958 RNU2-48P-201ENST00000410694 191 ntBASIC1.63□□□□□ -2.15
FOXC2Q99958 AP000275.1-201ENST00000411943 390 ntBASIC1.63□□□□□ -2.15
FOXC2Q99958 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.63□□□□□ -2.15
FOXC2Q99958 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
FOXC2Q99958 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.63□□□□□ -2.15
FOXC2Q99958 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.63□□□□□ -2.15
FOXC2Q99958 MTND1P18-201ENST00000448191 573 ntBASIC1.63□□□□□ -2.15
FOXC2Q99958 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.63□□□□□ -2.15
FOXC2Q99958 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.63□□□□□ -2.15
FOXC2Q99958 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.63□□□□□ -2.15
FOXC2Q99958 AP001025.1-201ENST00000486139 332 ntBASIC1.63□□□□□ -2.15
FOXC2Q99958 RNU1-40P-201ENST00000516816 164 ntBASIC1.63□□□□□ -2.15
FOXC2Q99958 RNU1-97P-201ENST00000516872 164 ntBASIC1.63□□□□□ -2.15
FOXC2Q99958 RNU6-667P-201ENST00000517186 102 ntBASIC1.63□□□□□ -2.15
FOXC2Q99958 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.63□□□□□ -2.15
FOXC2Q99958 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.63□□□□□ -2.15
FOXC2Q99958 AC093249.1-201ENST00000567049 203 ntBASIC1.63□□□□□ -2.15
FOXC2Q99958 MIR4299-201ENST00000577899 72 ntBASIC1.63□□□□□ -2.15
FOXC2Q99958 AC243960.4-201ENST00000600532 288 ntBASIC1.63□□□□□ -2.15
FOXC2Q99958 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
FOXC2Q99958 AC072046.2-201ENST00000618366 268 ntBASIC1.63□□□□□ -2.15
FOXC2Q99958 AC009487.4-201ENST00000624969 3585 ntBASIC1.63□□□□□ -2.15
FOXC2Q99958 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
FOXC2Q99958 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.63□□□□□ -2.15
FOXC2Q99958 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
FOXC2Q99958 RNU6-179P-201ENST00000363350 107 ntBASIC1.62□□□□□ -2.15
FOXC2Q99958 RNU6-1119P-201ENST00000384349 108 ntBASIC1.62□□□□□ -2.15
FOXC2Q99958 MIR10A-201ENST00000385043 110 ntBASIC1.62□□□□□ -2.15
FOXC2Q99958 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
FOXC2Q99958 CISD1P1-201ENST00000393907 327 ntBASIC1.62□□□□□ -2.15
FOXC2Q99958 AL627390.1-201ENST00000396055 340 ntBASIC1.62□□□□□ -2.15
FOXC2Q99958 RNA5SP390-201ENST00000410191 113 ntBASIC1.62□□□□□ -2.15
FOXC2Q99958 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.62□□□□□ -2.15
FOXC2Q99958 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.62□□□□□ -2.15
FOXC2Q99958 HMGN2P19-201ENST00000425149 265 ntBASIC1.62□□□□□ -2.15
FOXC2Q99958 AC027124.2-201ENST00000428249 105 ntBASIC1.62□□□□□ -2.15
FOXC2Q99958 CALM1P1-201ENST00000442082 433 ntBASIC1.62□□□□□ -2.15
FOXC2Q99958 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.62□□□□□ -2.15
FOXC2Q99958 MTND2P22-201ENST00000444325 1033 ntBASIC1.62□□□□□ -2.15
FOXC2Q99958 RPL23AP6-201ENST00000446637 472 ntBASIC1.62□□□□□ -2.15
FOXC2Q99958 AC006512.1-201ENST00000468816 291 ntBASIC1.62□□□□□ -2.15
FOXC2Q99958 SNORA31.23-201ENST00000517219 133 ntBASIC1.62□□□□□ -2.15
FOXC2Q99958 CYCSP27-201ENST00000527643 293 ntBASIC1.62□□□□□ -2.15
FOXC2Q99958 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.62□□□□□ -2.15
FOXC2Q99958 AP005435.4-201ENST00000529514 284 ntBASIC1.62□□□□□ -2.15
FOXC2Q99958 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.62□□□□□ -2.15
FOXC2Q99958 DNAJC19P9-201ENST00000555084 351 ntBASIC1.62□□□□□ -2.15
FOXC2Q99958 MTCYBP33-201ENST00000575007 1130 ntBASIC1.62□□□□□ -2.15
FOXC2Q99958 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.62□□□□□ -2.15
FOXC2Q99958 MIR548AC-201ENST00000585049 88 ntBASIC1.62□□□□□ -2.15
FOXC2Q99958 AL158032.1-201ENST00000605401 106 ntBASIC1.62□□□□□ -2.15
FOXC2Q99958 AC080013.6-201ENST00000606185 215 ntBASIC1.62□□□□□ -2.15
FOXC2Q99958 AP001596.2-201ENST00000608410 312 ntBASIC1.62□□□□□ -2.15
FOXC2Q99958 AC084768.2-201ENST00000622736 221 ntBASIC1.62□□□□□ -2.15
FOXC2Q99958 AL359740.1-201ENST00000624340 592 ntBASIC1.62□□□□□ -2.15
FOXC2Q99958 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.62□□□□□ -2.15
FOXC2Q99958 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.62□□□□□ -2.15
FOXC2Q99958 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
FOXC2Q99958 AC027514.1-201ENST00000588561 1603 ntBASIC1.62□□□□□ -2.15
FOXC2Q99958 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
FOXC2Q99958 RNU6-655P-201ENST00000362858 107 ntBASIC1.61□□□□□ -2.15
FOXC2Q99958 Y_RNA.224-201ENST00000364308 111 ntBASIC1.61□□□□□ -2.15
FOXC2Q99958 SNORD14B-201ENST00000364533 90 ntBASIC1.61□□□□□ -2.15
FOXC2Q99958 Y_RNA.359-201ENST00000365498 102 ntBASIC1.61□□□□□ -2.15
FOXC2Q99958 RNU4-48P-201ENST00000365559 182 ntBASIC1.61□□□□□ -2.15
FOXC2Q99958 RNU6-611P-201ENST00000384276 104 ntBASIC1.61□□□□□ -2.15
FOXC2Q99958 RNU6-606P-201ENST00000384721 111 ntBASIC1.61□□□□□ -2.15
FOXC2Q99958 OR6C66P-201ENST00000414917 930 ntBASIC1.61□□□□□ -2.15
FOXC2Q99958 AL358934.1-201ENST00000432346 324 ntBASIC1.61□□□□□ -2.15
FOXC2Q99958 AC000111.3-201ENST00000433478 193 ntBASIC1.61□□□□□ -2.15
FOXC2Q99958 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.61□□□□□ -2.15
FOXC2Q99958 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.61□□□□□ -2.15
FOXC2Q99958 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.61□□□□□ -2.15
FOXC2Q99958 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.61□□□□□ -2.15
FOXC2Q99958 MTCO3P9-201ENST00000506989 781 ntBASIC1.61□□□□□ -2.15
FOXC2Q99958 AC107393.1-201ENST00000512403 346 ntBASIC1.61□□□□□ -2.15
FOXC2Q99958 AL391840.1-201ENST00000571144 367 ntBASIC1.61□□□□□ -2.15
FOXC2Q99958 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms