Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.81□□□□□ -2.12
NPAS2Q99743 TPT1P7-201ENST00000458300 517 ntBASIC1.81□□□□□ -2.12
NPAS2Q99743 RPL23AP42-201ENST00000471152 471 ntBASIC1.81□□□□□ -2.12
NPAS2Q99743 MTCYBP40-201ENST00000509390 1135 ntBASIC1.81□□□□□ -2.12
NPAS2Q99743 AC079140.3-201ENST00000511111 550 ntBASIC1.81□□□□□ -2.12
NPAS2Q99743 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.81□□□□□ -2.12
NPAS2Q99743 RNU6-295P-201ENST00000516901 104 ntBASIC1.81□□□□□ -2.12
NPAS2Q99743 RNU6-445P-201ENST00000516949 107 ntBASIC1.81□□□□□ -2.12
NPAS2Q99743 AK6P1-201ENST00000540219 478 ntBASIC1.81□□□□□ -2.12
NPAS2Q99743 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.81□□□□□ -2.12
NPAS2Q99743 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.81□□□□□ -2.12
NPAS2Q99743 AC110588.1-201ENST00000559699 137 ntBASIC1.81□□□□□ -2.12
NPAS2Q99743 PIGPP4-201ENST00000584447 307 ntBASIC1.81□□□□□ -2.12
NPAS2Q99743 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.81□□□□□ -2.12
NPAS2Q99743 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
NPAS2Q99743 AC009509.4-201ENST00000619202 509 ntBASIC1.81□□□□□ -2.12
NPAS2Q99743 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.81□□□□□ -2.12
NPAS2Q99743 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.81□□□□□ -2.12
NPAS2Q99743 ZNF72P-201ENST00000425869 1908 ntBASIC1.81□□□□□ -2.12
NPAS2Q99743 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.81□□□□□ -2.12
NPAS2Q99743 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.8□□□□□ -2.12
NPAS2Q99743 Y_RNA.51-201ENST00000362725 102 ntBASIC1.8□□□□□ -2.12
NPAS2Q99743 RNU6-944P-201ENST00000364023 107 ntBASIC1.8□□□□□ -2.12
NPAS2Q99743 SNORA16.1-201ENST00000364597 132 ntBASIC1.8□□□□□ -2.12
NPAS2Q99743 SNORD115-7-201ENST00000365306 82 ntBASIC1.8□□□□□ -2.12
NPAS2Q99743 SNORA8-201ENST00000384574 139 ntBASIC1.8□□□□□ -2.12
NPAS2Q99743 DEFB108C-201ENST00000400154 252 ntBASIC1.8□□□□□ -2.12
NPAS2Q99743 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.8□□□□□ -2.12
NPAS2Q99743 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.8□□□□□ -2.12
NPAS2Q99743 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.8□□□□□ -2.12
NPAS2Q99743 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.8□□□□□ -2.12
NPAS2Q99743 HMGB1P18-201ENST00000438801 619 ntBASIC1.8□□□□□ -2.12
NPAS2Q99743 AC003989.2-201ENST00000440224 169 ntBASIC1.8□□□□□ -2.12
NPAS2Q99743 PPP1R2P5-201ENST00000457256 603 ntBASIC1.8□□□□□ -2.12
NPAS2Q99743 AL162395.1-201ENST00000457882 422 ntBASIC1.8□□□□□ -2.12
NPAS2Q99743 RPL30P1-201ENST00000488676 339 ntBASIC1.8□□□□□ -2.12
NPAS2Q99743 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.8□□□□□ -2.12
NPAS2Q99743 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
NPAS2Q99743 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.8□□□□□ -2.12
NPAS2Q99743 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.8□□□□□ -2.12
NPAS2Q99743 AP003072.2-201ENST00000527756 676 ntBASIC1.8□□□□□ -2.12
NPAS2Q99743 MIR3611-201ENST00000584484 83 ntBASIC1.8□□□□□ -2.12
NPAS2Q99743 AC091135.1-201ENST00000585943 307 ntBASIC1.8□□□□□ -2.12
NPAS2Q99743 AC012493.3-201ENST00000604494 112 ntBASIC1.8□□□□□ -2.12
NPAS2Q99743 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.8□□□□□ -2.12
NPAS2Q99743 AC091834.1-201ENST00000614543 472 ntBASIC1.8□□□□□ -2.12
NPAS2Q99743 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.8□□□□□ -2.12
NPAS2Q99743 AC136475.10-201ENST00000620253 385 ntBASIC1.8□□□□□ -2.12
NPAS2Q99743 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NPAS2Q99743 RNU5E-7P-201ENST00000365290 117 ntBASIC1.79□□□□□ -2.12
NPAS2Q99743 RNU6-108P-201ENST00000365558 107 ntBASIC1.79□□□□□ -2.12
NPAS2Q99743 RNU6-116P-201ENST00000384042 109 ntBASIC1.79□□□□□ -2.12
NPAS2Q99743 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
NPAS2Q99743 MIR1262-201ENST00000408276 93 ntBASIC1.79□□□□□ -2.12
NPAS2Q99743 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.79□□□□□ -2.12
NPAS2Q99743 RNU6-607P-201ENST00000411283 108 ntBASIC1.79□□□□□ -2.12
NPAS2Q99743 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.79□□□□□ -2.12
NPAS2Q99743 CDK8P2-201ENST00000415020 547 ntBASIC1.79□□□□□ -2.12
NPAS2Q99743 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.79□□□□□ -2.12
NPAS2Q99743 PIGFP2-201ENST00000421400 651 ntBASIC1.79□□□□□ -2.12
NPAS2Q99743 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.79□□□□□ -2.12
NPAS2Q99743 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.79□□□□□ -2.12
NPAS2Q99743 AC007677.1-201ENST00000445757 515 ntBASIC1.79□□□□□ -2.12
NPAS2Q99743 AC079781.2-201ENST00000446424 169 ntBASIC1.79□□□□□ -2.12
NPAS2Q99743 AL353752.1-201ENST00000454946 260 ntBASIC1.79□□□□□ -2.12
NPAS2Q99743 RPS29P15-201ENST00000458329 171 ntBASIC1.79□□□□□ -2.12
NPAS2Q99743 AC104806.1-201ENST00000508720 308 ntBASIC1.79□□□□□ -2.12
NPAS2Q99743 PTP4A1P4-201ENST00000512479 322 ntBASIC1.79□□□□□ -2.12
NPAS2Q99743 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.79□□□□□ -2.12
NPAS2Q99743 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.79□□□□□ -2.12
NPAS2Q99743 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.79□□□□□ -2.12
NPAS2Q99743 SUB1P2-201ENST00000556401 297 ntBASIC1.79□□□□□ -2.12
NPAS2Q99743 MTND1P15-201ENST00000579262 949 ntBASIC1.79□□□□□ -2.12
NPAS2Q99743 AC072046.2-201ENST00000618366 268 ntBASIC1.79□□□□□ -2.12
NPAS2Q99743 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.79□□□□□ -2.12
NPAS2Q99743 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
NPAS2Q99743 AL354685.2-201ENST00000448218 1447 ntBASIC1.78□□□□□ -2.12
NPAS2Q99743 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
NPAS2Q99743 RNA5SP212-201ENST00000391223 107 ntBASIC1.78□□□□□ -2.12
NPAS2Q99743 AL356432.1-201ENST00000405809 419 ntBASIC1.78□□□□□ -2.12
NPAS2Q99743 RNU2-3P-201ENST00000410144 191 ntBASIC1.78□□□□□ -2.12
NPAS2Q99743 RNU2-9P-201ENST00000410194 145 ntBASIC1.78□□□□□ -2.12
NPAS2Q99743 CBX3P6-201ENST00000430257 527 ntBASIC1.78□□□□□ -2.12
NPAS2Q99743 MTCO2P11-201ENST00000431069 680 ntBASIC1.78□□□□□ -2.12
NPAS2Q99743 AC007969.2-201ENST00000441891 191 ntBASIC1.78□□□□□ -2.12
NPAS2Q99743 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.78□□□□□ -2.12
NPAS2Q99743 Z83846.1-201ENST00000446798 265 ntBASIC1.78□□□□□ -2.12
NPAS2Q99743 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.78□□□□□ -2.12
NPAS2Q99743 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.78□□□□□ -2.12
NPAS2Q99743 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.78□□□□□ -2.12
NPAS2Q99743 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.78□□□□□ -2.12
NPAS2Q99743 SNORD27.1-201ENST00000516319 72 ntBASIC1.78□□□□□ -2.12
NPAS2Q99743 MTCO2P4-201ENST00000517968 247 ntBASIC1.78□□□□□ -2.12
NPAS2Q99743 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.78□□□□□ -2.12
NPAS2Q99743 AP005639.2-201ENST00000527592 928 ntBASIC1.78□□□□□ -2.12
NPAS2Q99743 AL391840.1-201ENST00000571144 367 ntBASIC1.78□□□□□ -2.12
NPAS2Q99743 MIR4419B-201ENST00000577260 68 ntBASIC1.78□□□□□ -2.12
NPAS2Q99743 AC011494.1-201ENST00000596454 237 ntBASIC1.78□□□□□ -2.12
NPAS2Q99743 AC073539.2-201ENST00000597113 165 ntBASIC1.78□□□□□ -2.12
NPAS2Q99743 AC109347.2-201ENST00000610220 349 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms