Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 SNORA75.2-201ENST00000391138 150 ntBASIC-0.23□□□□□ -2.45
COL12A1Q99715 AC063976.4-201ENST00000421971 163 ntBASIC-0.23□□□□□ -2.45
COL12A1Q99715 SNRPEP9-201ENST00000436794 238 ntBASIC-0.23□□□□□ -2.45
COL12A1Q99715 PTK2-220ENST00000520151 573 ntTSL 4 BASIC-0.23□□□□□ -2.45
COL12A1Q99715 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC-0.23□□□□□ -2.45
COL12A1Q99715 AC060771.1-201ENST00000582031 164 ntBASIC-0.23□□□□□ -2.45
COL12A1Q99715 BBIP1P1-201ENST00000602999 279 ntBASIC-0.23□□□□□ -2.45
COL12A1Q99715 AL590240.4-201ENST00000616908 390 ntBASIC-0.23□□□□□ -2.45
COL12A1Q99715 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.23□□□□□ -2.45
COL12A1Q99715 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
COL12A1Q99715 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC-0.24□□□□□ -2.45
COL12A1Q99715 RNU6-858P-201ENST00000362436 107 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC-0.24□□□□□ -2.45
COL12A1Q99715 RNU6-1293P-201ENST00000384077 107 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 RNU6-24P-201ENST00000384440 107 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 MIR95-201ENST00000385072 81 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 Y_RNA.582-201ENST00000391023 95 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 C1DP2-201ENST00000418167 426 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 C1DP4-201ENST00000455429 424 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.24□□□□□ -2.45
COL12A1Q99715 MTCO3P2-201ENST00000457365 171 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC-0.24□□□□□ -2.45
COL12A1Q99715 AC093303.1-201ENST00000514549 295 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 AP003392.2-201ENST00000527269 208 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
COL12A1Q99715 ADAM3B-201ENST00000569937 840 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 AC079791.1-201ENST00000605356 973 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 MIR7844-201ENST00000616161 122 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 RNU6-156P-201ENST00000621869 107 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
COL12A1Q99715 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC-0.24□□□□□ -2.45
COL12A1Q99715 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
COL12A1Q99715 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC-0.24□□□□□ -2.45
COL12A1Q99715 AL714022.1-201ENST00000439897 151 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 RAD1P2-201ENST00000446414 663 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 AC116337.2-201ENST00000477662 156 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC-0.24□□□□□ -2.45
COL12A1Q99715 AC007151.1-201ENST00000572774 483 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 AC012065.4-201ENST00000602445 679 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 AL121652.1-201ENST00000608851 448 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 AL359314.1-201ENST00000616913 261 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 RNU5E-1-201ENST00000362477 120 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 RNU6-910P-201ENST00000390844 107 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.24□□□□□ -2.45
COL12A1Q99715 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.24□□□□□ -2.45
COL12A1Q99715 DAP3P1-201ENST00000441522 278 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 AC091021.1-201ENST00000468051 388 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC-0.24□□□□□ -2.45
COL12A1Q99715 RN7SKP19-201ENST00000516016 252 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 AC092325.1-201ENST00000566449 554 ntBASIC-0.24□□□□□ -2.45
COL12A1Q99715 MIR377-201ENST00000362145 69 ntBASIC-0.25□□□□□ -2.45
COL12A1Q99715 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
COL12A1Q99715 MIR548L-201ENST00000408303 86 ntBASIC-0.25□□□□□ -2.45
COL12A1Q99715 AC006210.1-201ENST00000424882 111 ntBASIC-0.25□□□□□ -2.45
COL12A1Q99715 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.25□□□□□ -2.45
COL12A1Q99715 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC-0.25□□□□□ -2.45
COL12A1Q99715 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.25□□□□□ -2.45
COL12A1Q99715 AC091860.1-201ENST00000505723 432 ntBASIC-0.25□□□□□ -2.45
COL12A1Q99715 MTND1P22-201ENST00000510572 951 ntBASIC-0.25□□□□□ -2.45
COL12A1Q99715 ZNF705CP-201ENST00000530515 889 ntBASIC-0.25□□□□□ -2.45
COL12A1Q99715 MIR3921-201ENST00000577308 85 ntBASIC-0.25□□□□□ -2.45
COL12A1Q99715 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.25□□□□□ -2.45
COL12A1Q99715 MIR4436A-201ENST00000585278 85 ntBASIC-0.25□□□□□ -2.45
COL12A1Q99715 FAS-AS1.2-201ENST00000620386 170 ntBASIC-0.25□□□□□ -2.45
COL12A1Q99715 AL391099.1-201ENST00000624635 187 ntBASIC-0.25□□□□□ -2.45
COL12A1Q99715 AC107982.1-201ENST00000507171 1300 ntBASIC-0.25□□□□□ -2.45
COL12A1Q99715 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.25□□□□□ -2.45
COL12A1Q99715 SNORA42.1-201ENST00000363515 137 ntBASIC-0.25□□□□□ -2.45
COL12A1Q99715 SNORA36.2-201ENST00000384004 127 ntBASIC-0.25□□□□□ -2.45
COL12A1Q99715 RNU6-1035P-201ENST00000384477 107 ntBASIC-0.25□□□□□ -2.45
COL12A1Q99715 MIR140-201ENST00000385282 100 ntBASIC-0.25□□□□□ -2.45
COL12A1Q99715 SNORD83B-201ENST00000386745 93 ntBASIC-0.25□□□□□ -2.45
COL12A1Q99715 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-0.25□□□□□ -2.45
COL12A1Q99715 RNU6-953P-201ENST00000459154 107 ntBASIC-0.25□□□□□ -2.45
COL12A1Q99715 RNU7-159P-201ENST00000459284 62 ntBASIC-0.25□□□□□ -2.45
COL12A1Q99715 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC-0.25□□□□□ -2.45
COL12A1Q99715 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC-0.25□□□□□ -2.45
COL12A1Q99715 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.25□□□□□ -2.45
COL12A1Q99715 AC005261.5-201ENST00000596280 355 ntBASIC-0.25□□□□□ -2.45
COL12A1Q99715 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.25□□□□□ -2.45
COL12A1Q99715 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
COL12A1Q99715 SNORD12-201ENST00000391002 90 ntBASIC-0.26□□□□□ -2.45
COL12A1Q99715 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.26□□□□□ -2.45
COL12A1Q99715 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.26□□□□□ -2.45
COL12A1Q99715 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.26□□□□□ -2.45
COL12A1Q99715 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.26□□□□□ -2.45
COL12A1Q99715 MDM2-232ENST00000544561 213 ntTSL 5 BASIC-0.26□□□□□ -2.45
COL12A1Q99715 SUMO2P14-201ENST00000604488 293 ntBASIC-0.26□□□□□ -2.45
COL12A1Q99715 AL355802.4-201ENST00000607635 548 ntBASIC-0.26□□□□□ -2.45
COL12A1Q99715 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC-0.26□□□□□ -2.45
COL12A1Q99715 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.26□□□□□ -2.45
COL12A1Q99715 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.26□□□□□ -2.45
COL12A1Q99715 MIR1302-8-201ENST00000408342 128 ntBASIC-0.26□□□□□ -2.45
COL12A1Q99715 UBE2V1P8-201ENST00000437166 265 ntBASIC-0.26□□□□□ -2.45
COL12A1Q99715 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC-0.26□□□□□ -2.45
COL12A1Q99715 BRK1P2-201ENST00000442875 223 ntBASIC-0.26□□□□□ -2.45
COL12A1Q99715 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms