Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.03□□□□□ -2.08
RAB40CQ96S21 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.03□□□□□ -2.08
RAB40CQ96S21 Y_RNA.665-201ENST00000516177 98 ntBASIC2.03□□□□□ -2.08
RAB40CQ96S21 AC104576.1-201ENST00000524225 88 ntBASIC2.03□□□□□ -2.08
RAB40CQ96S21 AP000763.2-201ENST00000540641 163 ntBASIC2.03□□□□□ -2.08
RAB40CQ96S21 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.03□□□□□ -2.08
RAB40CQ96S21 MIR4529-201ENST00000578110 78 ntBASIC2.03□□□□□ -2.08
RAB40CQ96S21 ELOCP29-201ENST00000588193 334 ntBASIC2.03□□□□□ -2.08
RAB40CQ96S21 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.03□□□□□ -2.08
RAB40CQ96S21 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
RAB40CQ96S21 SCARNA15.3-201ENST00000626315 122 ntBASIC2.03□□□□□ -2.08
RAB40CQ96S21 SCARNA4.1-201ENST00000628597 123 ntBASIC2.03□□□□□ -2.08
RAB40CQ96S21 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RAB40CQ96S21 Y_RNA.6-201ENST00000362350 114 ntBASIC2.02□□□□□ -2.09
RAB40CQ96S21 RNU6-1141P-201ENST00000364520 107 ntBASIC2.02□□□□□ -2.09
RAB40CQ96S21 Y_RNA.256-201ENST00000364594 104 ntBASIC2.02□□□□□ -2.09
RAB40CQ96S21 MIR29B2-201ENST00000385055 81 ntBASIC2.02□□□□□ -2.09
RAB40CQ96S21 Y_RNA.615-201ENST00000410769 117 ntBASIC2.02□□□□□ -2.09
RAB40CQ96S21 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.02□□□□□ -2.09
RAB40CQ96S21 SNRPEP10-201ENST00000420249 274 ntBASIC2.02□□□□□ -2.09
RAB40CQ96S21 SRIP2-201ENST00000428470 166 ntBASIC2.02□□□□□ -2.09
RAB40CQ96S21 AL359672.1-201ENST00000442302 409 ntBASIC2.02□□□□□ -2.09
RAB40CQ96S21 HMGN2P26-201ENST00000463169 339 ntBASIC2.02□□□□□ -2.09
RAB40CQ96S21 AC055731.1-201ENST00000474387 401 ntBASIC2.02□□□□□ -2.09
RAB40CQ96S21 AC107032.1-201ENST00000485945 480 ntBASIC2.02□□□□□ -2.09
RAB40CQ96S21 AC008628.2-201ENST00000502605 298 ntBASIC2.02□□□□□ -2.09
RAB40CQ96S21 RNU5F-2P-201ENST00000516066 82 ntBASIC2.02□□□□□ -2.09
RAB40CQ96S21 RN7SKP256-201ENST00000517201 314 ntBASIC2.02□□□□□ -2.09
RAB40CQ96S21 RNU2-19P-201ENST00000517288 84 ntBASIC2.02□□□□□ -2.09
RAB40CQ96S21 MTND1P5-201ENST00000517906 940 ntBASIC2.02□□□□□ -2.09
RAB40CQ96S21 IGLV3-17-201ENST00000519099 244 ntBASIC2.02□□□□□ -2.09
RAB40CQ96S21 AC034114.1-201ENST00000520293 285 ntBASIC2.02□□□□□ -2.09
RAB40CQ96S21 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.02□□□□□ -2.09
RAB40CQ96S21 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.02□□□□□ -2.09
RAB40CQ96S21 MIR5694-201ENST00000581190 76 ntBASIC2.02□□□□□ -2.09
RAB40CQ96S21 AC007229.1-201ENST00000590455 412 ntBASIC2.02□□□□□ -2.09
RAB40CQ96S21 AC068790.6-201ENST00000602558 258 ntBASIC2.02□□□□□ -2.09
RAB40CQ96S21 AC064836.2-201ENST00000609491 462 ntBASIC2.02□□□□□ -2.09
RAB40CQ96S21 U4.3-201ENST00000621047 82 ntBASIC2.02□□□□□ -2.09
RAB40CQ96S21 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
RAB40CQ96S21 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
RAB40CQ96S21 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.01□□□□□ -2.09
RAB40CQ96S21 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
RAB40CQ96S21 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
RAB40CQ96S21 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
RAB40CQ96S21 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
RAB40CQ96S21 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RAB40CQ96S21 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RAB40CQ96S21 Y_RNA.89-201ENST00000363031 102 ntBASIC2.01□□□□□ -2.09
RAB40CQ96S21 RNU1-112P-201ENST00000364401 164 ntBASIC2.01□□□□□ -2.09
RAB40CQ96S21 SNORD114-30-201ENST00000364448 72 ntBASIC2.01□□□□□ -2.09
RAB40CQ96S21 SNORD32A-201ENST00000364805 84 ntBASIC2.01□□□□□ -2.09
RAB40CQ96S21 Y_RNA.373-201ENST00000365600 103 ntBASIC2.01□□□□□ -2.09
RAB40CQ96S21 SNORA80E-201ENST00000384744 137 ntBASIC2.01□□□□□ -2.09
RAB40CQ96S21 Y_RNA.573-201ENST00000384763 105 ntBASIC2.01□□□□□ -2.09
RAB40CQ96S21 SNORD115-47-201ENST00000391226 86 ntBASIC2.01□□□□□ -2.09
RAB40CQ96S21 MIR548F1-201ENST00000408667 84 ntBASIC2.01□□□□□ -2.09
RAB40CQ96S21 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.01□□□□□ -2.09
RAB40CQ96S21 AC244670.1-201ENST00000436879 112 ntBASIC2.01□□□□□ -2.09
RAB40CQ96S21 AC107083.1-201ENST00000439643 279 ntBASIC2.01□□□□□ -2.09
RAB40CQ96S21 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.01□□□□□ -2.09
RAB40CQ96S21 RNU6-1037P-201ENST00000459571 107 ntBASIC2.01□□□□□ -2.09
RAB40CQ96S21 RPL39P5-202ENST00000512505 151 ntBASIC2.01□□□□□ -2.09
RAB40CQ96S21 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.01□□□□□ -2.09
RAB40CQ96S21 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.01□□□□□ -2.09
RAB40CQ96S21 SNORA4.4-201ENST00000515921 135 ntBASIC2.01□□□□□ -2.09
RAB40CQ96S21 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.01□□□□□ -2.09
RAB40CQ96S21 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
RAB40CQ96S21 AC243972.3-201ENST00000539655 198 ntBASIC2.01□□□□□ -2.09
RAB40CQ96S21 HSPE1P4-201ENST00000550617 308 ntBASIC2.01□□□□□ -2.09
RAB40CQ96S21 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.01□□□□□ -2.09
RAB40CQ96S21 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.01□□□□□ -2.09
RAB40CQ96S21 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.01□□□□□ -2.09
RAB40CQ96S21 AP001836.1-201ENST00000604675 523 ntBASIC2.01□□□□□ -2.09
RAB40CQ96S21 ELOCP5-201ENST00000604924 333 ntBASIC2.01□□□□□ -2.09
RAB40CQ96S21 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.01□□□□□ -2.09
RAB40CQ96S21 RMST_3.1-201ENST00000611651 109 ntBASIC2.01□□□□□ -2.09
RAB40CQ96S21 MIR6840-201ENST00000611937 71 ntBASIC2.01□□□□□ -2.09
RAB40CQ96S21 AC024614.3-201ENST00000637860 256 ntBASIC2.01□□□□□ -2.09
RAB40CQ96S21 AC073869.6-201ENST00000640656 341 ntBASIC2.01□□□□□ -2.09
RAB40CQ96S21 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RAB40CQ96S21 AP000560.1-201ENST00000624150 1937 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 AL596028.1-201ENST00000326971 197 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 MIRLET7G-201ENST00000362280 84 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 SNORD62.1-201ENST00000362541 86 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 U3.12-201ENST00000364498 214 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 RNU6-1329P-201ENST00000365664 107 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 RNU6-877P-201ENST00000383868 107 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 RNU6-214P-201ENST00000384130 107 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 SNORA40.19-201ENST00000390846 128 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 AL590556.1-201ENST00000423231 483 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 USP9YP18-201ENST00000425912 695 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 AC105272.1-201ENST00000438604 198 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 AL031659.1-201ENST00000447075 539 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 HMGB1P35-201ENST00000503360 598 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 AC022447.4-201ENST00000504053 364 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2□□□□□ -2.09
RAB40CQ96S21 RNU6-1332P-201ENST00000516666 104 ntBASIC2□□□□□ -2.09
RAB40CQ96S21 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2□□□□□ -2.09
RAB40CQ96S21 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms