Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 RNU6-799P-201ENST00000363567 107 ntBASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 Y_RNA.188-201ENST00000363952 111 ntBASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 RNU1-115P-201ENST00000365329 160 ntBASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 RNU6-1222P-201ENST00000384615 107 ntBASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 Y_RNA.618-201ENST00000410949 107 ntBASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 RN7SKP284-201ENST00000411002 343 ntBASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 BMS1P22-201ENST00000414726 313 ntBASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 NUP35P1-201ENST00000422734 947 ntBASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 MRPS18CP6-201ENST00000423587 223 ntBASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 SNRPEP9-201ENST00000436794 238 ntBASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 PCMTD1P1-201ENST00000455560 355 ntBASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 U8.20-201ENST00000459445 131 ntBASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 AC008571.1-201ENST00000467232 300 ntBASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 RPL30P14-201ENST00000482744 348 ntBASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 AC116655.1-201ENST00000508324 901 ntBASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 RNU6-1315P-201ENST00000517187 99 ntBASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 GNAI2P1-201ENST00000541815 315 ntBASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 H3F3AP1-201ENST00000559984 334 ntBASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 AMZ2P1-203ENST00000565833 850 ntBASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 AC109446.1-201ENST00000566172 220 ntBASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 OR1M4P-201ENST00000589199 287 ntBASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VCPIP1Q96JH7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 RNA5SP139-201ENST00000364340 117 ntBASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 RNU6-99P-201ENST00000364721 107 ntBASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 RNA5SP126-201ENST00000365092 109 ntBASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 RNU6-1179P-201ENST00000384667 107 ntBASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 SNORA41-201ENST00000384675 132 ntBASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 AL445529.1-201ENST00000398713 389 ntBASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 RNU6-101P-201ENST00000410323 104 ntBASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 RNU2-23P-201ENST00000410545 195 ntBASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 RNU6-143P-201ENST00000516942 93 ntBASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 RNU6-1271P-201ENST00000517049 105 ntBASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 Y_RNA.721-201ENST00000517207 102 ntBASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 RNU6-794P-201ENST00000517261 64 ntBASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 HSBP1P1-201ENST00000555205 166 ntBASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 MIR4506-201ENST00000584693 77 ntBASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 AC078899.3-201ENST00000599065 212 ntBASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 PRR13P7-201ENST00000605538 430 ntBASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 FTX_3.1-201ENST00000610451 147 ntBASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 AC007792.1-201ENST00000623023 402 ntBASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VCPIP1Q96JH7 Y_RNA.39-201ENST00000362620 98 ntBASIC3.06□□□□□ -1.92
VCPIP1Q96JH7 Y_RNA.314-201ENST00000365114 102 ntBASIC3.06□□□□□ -1.92
VCPIP1Q96JH7 RNU6-1035P-201ENST00000384477 107 ntBASIC3.06□□□□□ -1.92
VCPIP1Q96JH7 RNU6-790P-201ENST00000384479 105 ntBASIC3.06□□□□□ -1.92
VCPIP1Q96JH7 MIR512-1-201ENST00000384913 84 ntBASIC3.06□□□□□ -1.92
VCPIP1Q96JH7 RNU6-607P-201ENST00000411283 108 ntBASIC3.06□□□□□ -1.92
VCPIP1Q96JH7 CYCSP33-201ENST00000414485 327 ntBASIC3.06□□□□□ -1.92
VCPIP1Q96JH7 AC099548.1-201ENST00000421443 426 ntBASIC3.06□□□□□ -1.92
VCPIP1Q96JH7 AC099799.1-201ENST00000439809 192 ntBASIC3.06□□□□□ -1.92
VCPIP1Q96JH7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.06□□□□□ -1.92
VCPIP1Q96JH7 AL353752.1-201ENST00000454946 260 ntBASIC3.06□□□□□ -1.92
VCPIP1Q96JH7 AC022493.1-201ENST00000492984 337 ntBASIC3.06□□□□□ -1.92
VCPIP1Q96JH7 AC083906.5-201ENST00000503722 328 ntBASIC3.06□□□□□ -1.92
VCPIP1Q96JH7 MRPS35P2-201ENST00000508242 191 ntBASIC3.06□□□□□ -1.92
VCPIP1Q96JH7 RNU4-77P-201ENST00000516692 156 ntBASIC3.06□□□□□ -1.92
VCPIP1Q96JH7 SNORA31.26-201ENST00000517250 137 ntBASIC3.06□□□□□ -1.92
VCPIP1Q96JH7 AL157871.3-201ENST00000557231 293 ntBASIC3.06□□□□□ -1.92
VCPIP1Q96JH7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.06□□□□□ -1.92
VCPIP1Q96JH7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
VCPIP1Q96JH7 MIR3609-201ENST00000582661 80 ntBASIC3.06□□□□□ -1.92
VCPIP1Q96JH7 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.06□□□□□ -1.92
VCPIP1Q96JH7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.06□□□□□ -1.92
VCPIP1Q96JH7 AC000403.1-201ENST00000613696 3585 ntBASIC3.06□□□□□ -1.92
VCPIP1Q96JH7 AC099654.7-201ENST00000635788 2127 ntBASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 MIR449A-201ENST00000362113 91 ntBASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 Y_RNA.48-201ENST00000362710 103 ntBASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 Y_RNA.324-201ENST00000365165 102 ntBASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 Y_RNA.424-201ENST00000384063 103 ntBASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 Y_RNA.476-201ENST00000384347 108 ntBASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 MT-TG-201ENST00000387429 68 ntBASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 RNU6-823P-201ENST00000391042 103 ntBASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 RNA5SP252-201ENST00000391131 119 ntBASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 RNU2-68P-201ENST00000410878 191 ntBASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 AL030996.1-201ENST00000411430 235 ntBASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 BX276092.3-201ENST00000424182 230 ntBASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 AC104332.2-201ENST00000429959 156 ntBASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.05□□□□□ -1.92
VCPIP1Q96JH7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 197.7 ms