Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AL138878.1-201ENST00000405131 347 ntBASIC3.87□□□□□ -1.79
DDX1Q92499 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.87□□□□□ -1.79
DDX1Q92499 BPY2DP-201ENST00000422208 265 ntBASIC3.87□□□□□ -1.79
DDX1Q92499 AC124916.1-201ENST00000444020 547 ntBASIC3.87□□□□□ -1.79
DDX1Q92499 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
DDX1Q92499 AC013470.1-201ENST00000453438 462 ntBASIC3.87□□□□□ -1.79
DDX1Q92499 AC010099.1-201ENST00000455434 375 ntBASIC3.87□□□□□ -1.79
DDX1Q92499 AC010469.2-201ENST00000496412 480 ntBASIC3.87□□□□□ -1.79
DDX1Q92499 AP000867.2-201ENST00000532468 320 ntBASIC3.87□□□□□ -1.79
DDX1Q92499 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.87□□□□□ -1.79
DDX1Q92499 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.87□□□□□ -1.79
DDX1Q92499 AC103996.1-201ENST00000555468 102 ntBASIC3.87□□□□□ -1.79
DDX1Q92499 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.87□□□□□ -1.79
DDX1Q92499 MIR4738-201ENST00000579134 87 ntBASIC3.87□□□□□ -1.79
DDX1Q92499 AC006557.5-201ENST00000603126 811 ntBASIC3.87□□□□□ -1.79
DDX1Q92499 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.87□□□□□ -1.79
DDX1Q92499 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.87□□□□□ -1.79
DDX1Q92499 MIR6852-201ENST00000621699 66 ntBASIC3.87□□□□□ -1.79
DDX1Q92499 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.87□□□□□ -1.79
DDX1Q92499 MIR3199-2-201ENST00000636243 86 ntBASIC3.87□□□□□ -1.79
DDX1Q92499 U4.7-201ENST00000638126 106 ntBASIC3.87□□□□□ -1.79
DDX1Q92499 ADAM3A-203ENST00000461344 2157 ntBASIC3.87□□□□□ -1.79
DDX1Q92499 MFSD8-236ENST00000641509 4050 ntBASIC3.87□□□□□ -1.79
DDX1Q92499 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
DDX1Q92499 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
DDX1Q92499 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
DDX1Q92499 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
DDX1Q92499 Z75746.1-201ENST00000440243 2080 ntBASIC3.86□□□□□ -1.79
DDX1Q92499 HSPA8P1-201ENST00000425843 1833 ntBASIC3.86□□□□□ -1.79
DDX1Q92499 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.86□□□□□ -1.79
DDX1Q92499 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
DDX1Q92499 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
DDX1Q92499 RNU6-1280P-201ENST00000365211 107 ntBASIC3.86□□□□□ -1.79
DDX1Q92499 RNA5SP240-201ENST00000365355 128 ntBASIC3.86□□□□□ -1.79
DDX1Q92499 RNU6-198P-201ENST00000384258 104 ntBASIC3.86□□□□□ -1.79
DDX1Q92499 MIR518D-201ENST00000385014 87 ntBASIC3.86□□□□□ -1.79
DDX1Q92499 RPS29P13-201ENST00000402041 169 ntBASIC3.86□□□□□ -1.79
DDX1Q92499 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.86□□□□□ -1.79
DDX1Q92499 MIR1298-201ENST00000408783 112 ntBASIC3.86□□□□□ -1.79
DDX1Q92499 AC007098.1-201ENST00000420122 367 ntBASIC3.86□□□□□ -1.79
DDX1Q92499 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.86□□□□□ -1.79
DDX1Q92499 RPS29P31-201ENST00000446147 164 ntBASIC3.86□□□□□ -1.79
DDX1Q92499 BX510359.1-201ENST00000456973 237 ntBASIC3.86□□□□□ -1.79
DDX1Q92499 SNORD105B-201ENST00000458770 79 ntBASIC3.86□□□□□ -1.79
DDX1Q92499 U8.21-201ENST00000459536 136 ntBASIC3.86□□□□□ -1.79
DDX1Q92499 RPL30P10-201ENST00000488148 337 ntBASIC3.86□□□□□ -1.79
DDX1Q92499 RNU6-1338P-201ENST00000516328 91 ntBASIC3.86□□□□□ -1.79
DDX1Q92499 RNU6-579P-201ENST00000516879 102 ntBASIC3.86□□□□□ -1.79
DDX1Q92499 Y_RNA.713-201ENST00000517013 96 ntBASIC3.86□□□□□ -1.79
DDX1Q92499 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.86□□□□□ -1.79
DDX1Q92499 MIR4300-201ENST00000581016 96 ntBASIC3.86□□□□□ -1.79
DDX1Q92499 AC024153.1-201ENST00000603103 365 ntBASIC3.86□□□□□ -1.79
DDX1Q92499 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.86□□□□□ -1.79
DDX1Q92499 MAPK10-373ENST00000641983 6772 ntBASIC3.86□□□□□ -1.79
DDX1Q92499 AC110491.1-201ENST00000562191 2010 ntBASIC3.86□□□□□ -1.79
DDX1Q92499 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.86□□□□□ -1.79
DDX1Q92499 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
DDX1Q92499 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.86□□□□□ -1.79
DDX1Q92499 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
DDX1Q92499 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
DDX1Q92499 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
DDX1Q92499 Y_RNA.16-201ENST00000362421 102 ntBASIC3.85□□□□□ -1.79
DDX1Q92499 RNU6-1266P-201ENST00000362794 105 ntBASIC3.85□□□□□ -1.79
DDX1Q92499 RNU6-78P-201ENST00000362897 107 ntBASIC3.85□□□□□ -1.79
DDX1Q92499 RNA5SP50-201ENST00000363731 107 ntBASIC3.85□□□□□ -1.79
DDX1Q92499 SNORA38.1-201ENST00000364172 131 ntBASIC3.85□□□□□ -1.79
DDX1Q92499 RNA5SP51-201ENST00000364750 119 ntBASIC3.85□□□□□ -1.79
DDX1Q92499 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.85□□□□□ -1.79
DDX1Q92499 U3.19-201ENST00000390893 196 ntBASIC3.85□□□□□ -1.79
DDX1Q92499 SNORA48.2-201ENST00000390926 124 ntBASIC3.85□□□□□ -1.79
DDX1Q92499 AL117339.3-201ENST00000418733 162 ntBASIC3.85□□□□□ -1.79
DDX1Q92499 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.85□□□□□ -1.79
DDX1Q92499 AC092423.1-201ENST00000430165 186 ntBASIC3.85□□□□□ -1.79
DDX1Q92499 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.85□□□□□ -1.79
DDX1Q92499 HMGN2P10-201ENST00000448085 265 ntBASIC3.85□□□□□ -1.79
DDX1Q92499 AP001486.1-201ENST00000463339 476 ntBASIC3.85□□□□□ -1.79
DDX1Q92499 RPL23AP14-201ENST00000468281 468 ntBASIC3.85□□□□□ -1.79
DDX1Q92499 UBE2DNL-203ENST00000474922 222 ntBASIC3.85□□□□□ -1.79
DDX1Q92499 AC107393.1-201ENST00000512403 346 ntBASIC3.85□□□□□ -1.79
DDX1Q92499 SNORA31.1-201ENST00000515993 133 ntBASIC3.85□□□□□ -1.79
DDX1Q92499 SNORA31.5-201ENST00000516190 133 ntBASIC3.85□□□□□ -1.79
DDX1Q92499 SNORA70.14-201ENST00000516205 110 ntBASIC3.85□□□□□ -1.79
DDX1Q92499 AC022868.1-201ENST00000517767 391 ntBASIC3.85□□□□□ -1.79
DDX1Q92499 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.85□□□□□ -1.79
DDX1Q92499 AC021739.1-201ENST00000559631 174 ntBASIC3.85□□□□□ -1.79
DDX1Q92499 AC009314.1-201ENST00000603871 304 ntBASIC3.85□□□□□ -1.79
DDX1Q92499 AC243829.7-201ENST00000633081 225 ntBASIC3.85□□□□□ -1.79
DDX1Q92499 AC007496.3-201ENST00000624987 3443 ntBASIC3.85□□□□□ -1.79
DDX1Q92499 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
DDX1Q92499 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.85□□□□□ -1.79
DDX1Q92499 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
DDX1Q92499 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
DDX1Q92499 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
DDX1Q92499 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.84□□□□□ -1.79
DDX1Q92499 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.84□□□□□ -1.79
DDX1Q92499 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
DDX1Q92499 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
DDX1Q92499 Y_RNA.83-201ENST00000363005 113 ntBASIC3.84□□□□□ -1.79
DDX1Q92499 RNU6-527P-201ENST00000363425 104 ntBASIC3.84□□□□□ -1.79
DDX1Q92499 RNU6-682P-201ENST00000363843 106 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms