Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.71□□□□□ -2.14
RNF139Q8WU17 MIR3122-201ENST00000577243 73 ntBASIC1.71□□□□□ -2.14
RNF139Q8WU17 MIR4769-201ENST00000584126 77 ntBASIC1.71□□□□□ -2.14
RNF139Q8WU17 AL136363.2-201ENST00000604173 851 ntBASIC1.71□□□□□ -2.14
RNF139Q8WU17 AL158032.1-201ENST00000605401 106 ntBASIC1.71□□□□□ -2.14
RNF139Q8WU17 AC123912.5-201ENST00000605470 343 ntBASIC1.71□□□□□ -2.14
RNF139Q8WU17 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.71□□□□□ -2.14
RNF139Q8WU17 ZNF72P-201ENST00000425869 1908 ntBASIC1.7□□□□□ -2.14
RNF139Q8WU17 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RNF139Q8WU17 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RNF139Q8WU17 Y_RNA.40-201ENST00000362645 93 ntBASIC1.7□□□□□ -2.14
RNF139Q8WU17 RNU6-944P-201ENST00000364023 107 ntBASIC1.7□□□□□ -2.14
RNF139Q8WU17 AF228730.1-201ENST00000397972 663 ntBASIC1.7□□□□□ -2.14
RNF139Q8WU17 OR9R1P-201ENST00000412200 877 ntBASIC1.7□□□□□ -2.14
RNF139Q8WU17 MTND3P17-201ENST00000416968 344 ntBASIC1.7□□□□□ -2.14
RNF139Q8WU17 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.7□□□□□ -2.14
RNF139Q8WU17 CETN4P-201ENST00000432407 469 ntBASIC1.7□□□□□ -2.14
RNF139Q8WU17 AL035666.1-201ENST00000446195 348 ntBASIC1.7□□□□□ -2.14
RNF139Q8WU17 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.7□□□□□ -2.14
RNF139Q8WU17 MTND2P33-201ENST00000506452 1031 ntBASIC1.7□□□□□ -2.14
RNF139Q8WU17 RBBP4P6-201ENST00000508098 202 ntBASIC1.7□□□□□ -2.14
RNF139Q8WU17 AC117522.1-201ENST00000509821 380 ntBASIC1.7□□□□□ -2.14
RNF139Q8WU17 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.7□□□□□ -2.14
RNF139Q8WU17 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.7□□□□□ -2.14
RNF139Q8WU17 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.7□□□□□ -2.14
RNF139Q8WU17 AC087883.1-201ENST00000551882 391 ntBASIC1.7□□□□□ -2.14
RNF139Q8WU17 MIR3682-201ENST00000581338 84 ntBASIC1.7□□□□□ -2.14
RNF139Q8WU17 AC008521.1-201ENST00000587471 187 ntBASIC1.7□□□□□ -2.14
RNF139Q8WU17 AC064872.1-201ENST00000604823 1072 ntBASIC1.7□□□□□ -2.14
RNF139Q8WU17 AL159153.1-201ENST00000619688 317 ntBASIC1.7□□□□□ -2.14
RNF139Q8WU17 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.7□□□□□ -2.14
RNF139Q8WU17 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RNF139Q8WU17 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
RNF139Q8WU17 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
RNF139Q8WU17 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.69□□□□□ -2.14
RNF139Q8WU17 RNY1P12-201ENST00000364251 105 ntBASIC1.69□□□□□ -2.14
RNF139Q8WU17 RNU6-234P-201ENST00000365229 104 ntBASIC1.69□□□□□ -2.14
RNF139Q8WU17 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RNF139Q8WU17 RNU6-641P-201ENST00000384006 107 ntBASIC1.69□□□□□ -2.14
RNF139Q8WU17 RNU6-160P-201ENST00000384591 107 ntBASIC1.69□□□□□ -2.14
RNF139Q8WU17 RNU6-1179P-201ENST00000384667 107 ntBASIC1.69□□□□□ -2.14
RNF139Q8WU17 RNA5SP213-201ENST00000391031 106 ntBASIC1.69□□□□□ -2.14
RNF139Q8WU17 CISD1P1-201ENST00000393907 327 ntBASIC1.69□□□□□ -2.14
RNF139Q8WU17 RN7SKP101-201ENST00000411376 320 ntBASIC1.69□□□□□ -2.14
RNF139Q8WU17 RNU6-333P-201ENST00000459117 107 ntBASIC1.69□□□□□ -2.14
RNF139Q8WU17 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.69□□□□□ -2.14
RNF139Q8WU17 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.69□□□□□ -2.14
RNF139Q8WU17 RNU6-970P-201ENST00000516312 107 ntBASIC1.69□□□□□ -2.14
RNF139Q8WU17 RN7SKP219-201ENST00000516825 296 ntBASIC1.69□□□□□ -2.14
RNF139Q8WU17 AP003072.2-201ENST00000527756 676 ntBASIC1.69□□□□□ -2.14
RNF139Q8WU17 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.69□□□□□ -2.14
RNF139Q8WU17 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.69□□□□□ -2.14
RNF139Q8WU17 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.69□□□□□ -2.14
RNF139Q8WU17 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.69□□□□□ -2.14
RNF139Q8WU17 AC008088.1-201ENST00000580993 280 ntBASIC1.69□□□□□ -2.14
RNF139Q8WU17 AC091135.1-201ENST00000585943 307 ntBASIC1.69□□□□□ -2.14
RNF139Q8WU17 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.69□□□□□ -2.14
RNF139Q8WU17 AC078883.4-201ENST00000623218 367 ntBASIC1.69□□□□□ -2.14
RNF139Q8WU17 AL157786.1-207ENST00000627771 695 ntBASIC1.69□□□□□ -2.14
RNF139Q8WU17 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
RNF139Q8WU17 MIR126-201ENST00000362291 85 ntBASIC1.68□□□□□ -2.14
RNF139Q8WU17 MIR578-201ENST00000384828 96 ntBASIC1.68□□□□□ -2.14
RNF139Q8WU17 EEF1A1P40-201ENST00000412883 573 ntBASIC1.68□□□□□ -2.14
RNF139Q8WU17 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.68□□□□□ -2.14
RNF139Q8WU17 PGBD4P6-201ENST00000421501 610 ntBASIC1.68□□□□□ -2.14
RNF139Q8WU17 CALM2P2-201ENST00000428512 440 ntBASIC1.68□□□□□ -2.14
RNF139Q8WU17 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.68□□□□□ -2.14
RNF139Q8WU17 RPL31P35-201ENST00000431058 377 ntBASIC1.68□□□□□ -2.14
RNF139Q8WU17 RPS15AP10-201ENST00000432472 382 ntBASIC1.68□□□□□ -2.14
RNF139Q8WU17 IFNA20P-201ENST00000436840 528 ntBASIC1.68□□□□□ -2.14
RNF139Q8WU17 AC098826.2-201ENST00000452011 651 ntBASIC1.68□□□□□ -2.14
RNF139Q8WU17 AC093259.1-201ENST00000509755 300 ntBASIC1.68□□□□□ -2.14
RNF139Q8WU17 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.68□□□□□ -2.14
RNF139Q8WU17 RNU6-965P-201ENST00000516721 96 ntBASIC1.68□□□□□ -2.14
RNF139Q8WU17 SNORA18.6-201ENST00000516792 115 ntBASIC1.68□□□□□ -2.14
RNF139Q8WU17 RNU6-685P-201ENST00000517088 95 ntBASIC1.68□□□□□ -2.14
RNF139Q8WU17 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.68□□□□□ -2.14
RNF139Q8WU17 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.68□□□□□ -2.14
RNF139Q8WU17 SNORD53B-201ENST00000577887 78 ntBASIC1.68□□□□□ -2.14
RNF139Q8WU17 DEFB131E-202ENST00000602581 683 ntBASIC1.68□□□□□ -2.14
RNF139Q8WU17 Z99497.2-201ENST00000603634 310 ntBASIC1.68□□□□□ -2.14
RNF139Q8WU17 AP000654.2-201ENST00000605633 586 ntBASIC1.68□□□□□ -2.14
RNF139Q8WU17 AC073114.1-201ENST00000612027 490 ntBASIC1.68□□□□□ -2.14
RNF139Q8WU17 AC026585.1-201ENST00000619582 524 ntBASIC1.68□□□□□ -2.14
RNF139Q8WU17 AC022079.1-201ENST00000621546 602 ntBASIC1.68□□□□□ -2.14
RNF139Q8WU17 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.68□□□□□ -2.14
RNF139Q8WU17 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
RNF139Q8WU17 RNU6-371P-201ENST00000364283 108 ntBASIC1.67□□□□□ -2.14
RNF139Q8WU17 SNORA62.1-201ENST00000364287 154 ntBASIC1.67□□□□□ -2.14
RNF139Q8WU17 Y_RNA.367-201ENST00000365544 101 ntBASIC1.67□□□□□ -2.14
RNF139Q8WU17 RNU6-74P-201ENST00000384235 107 ntBASIC1.67□□□□□ -2.14
RNF139Q8WU17 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
RNF139Q8WU17 RN7SKP142-201ENST00000411236 328 ntBASIC1.67□□□□□ -2.14
RNF139Q8WU17 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
RNF139Q8WU17 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.67□□□□□ -2.14
RNF139Q8WU17 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.67□□□□□ -2.14
RNF139Q8WU17 MTATP6P17-201ENST00000431030 672 ntBASIC1.67□□□□□ -2.14
RNF139Q8WU17 HMGB1P31-201ENST00000437242 427 ntBASIC1.67□□□□□ -2.14
RNF139Q8WU17 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.67□□□□□ -2.14
RNF139Q8WU17 AL353752.1-201ENST00000454946 260 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms