Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LMO3Q8TAP4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.74□□□□□ -1.97
LMO3Q8TAP4 RNU6-37P-201ENST00000362692 107 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 Y_RNA.149-201ENST00000363558 117 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 Y_RNA.176-201ENST00000363815 109 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 RNU6-11P-201ENST00000364234 107 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 SNORA7.2-201ENST00000364446 145 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 SNORD14B-201ENST00000364533 90 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 RNU6-7-201ENST00000364784 107 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 U8.8-201ENST00000365399 135 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 RNU6-8-201ENST00000365467 107 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 RNU6-25P-201ENST00000383873 107 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 RNU6-1-201ENST00000383898 107 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 RNU6-48P-201ENST00000384161 107 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 RNU6-36P-201ENST00000384172 107 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 RNU6-4P-201ENST00000384205 107 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 RNU6-5P-201ENST00000384238 107 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 RNU6-3P-201ENST00000384314 107 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 RNU6-16P-201ENST00000384385 107 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 RNU6-15P-201ENST00000384534 107 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 RNU6-2-201ENST00000384627 107 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 RNU6-29P-201ENST00000384637 107 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 RNU6-9-201ENST00000384776 107 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 RNU6-33P-201ENST00000384793 107 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 RNU6-823P-201ENST00000391042 103 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 Y_RNA.623-201ENST00000411128 95 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.74□□□□□ -1.97
LMO3Q8TAP4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LMO3Q8TAP4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.74□□□□□ -1.97
LMO3Q8TAP4 AL627311.1-201ENST00000431514 115 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 RPL23AP50-201ENST00000434149 455 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 RPL39P40-201ENST00000445481 146 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LMO3Q8TAP4 AC112492.4-201ENST00000456549 352 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 AC139453.3-201ENST00000493276 369 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 AC078918.1-201ENST00000498515 228 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.74□□□□□ -1.97
LMO3Q8TAP4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.74□□□□□ -1.97
LMO3Q8TAP4 Y_RNA.721-201ENST00000517207 102 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.74□□□□□ -1.97
LMO3Q8TAP4 MIR4319-201ENST00000577285 85 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 MIR5092-201ENST00000583139 88 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.74□□□□□ -1.97
LMO3Q8TAP4 AC078899.3-201ENST00000599065 212 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 AC018889.1-201ENST00000605372 397 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 RNU6-6P-201ENST00000606623 107 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 AL606534.2-204ENST00000635008 178 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 AL359693.1-201ENST00000614959 2407 ntBASIC2.74□□□□□ -1.97
LMO3Q8TAP4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
LMO3Q8TAP4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.73□□□□□ -1.97
LMO3Q8TAP4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.73□□□□□ -1.97
LMO3Q8TAP4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.73□□□□□ -1.97
LMO3Q8TAP4 SNORA25.6-201ENST00000364121 118 ntBASIC2.73□□□□□ -1.97
LMO3Q8TAP4 Y_RNA.577-201ENST00000384794 101 ntBASIC2.73□□□□□ -1.97
LMO3Q8TAP4 MT-TG-201ENST00000387429 68 ntBASIC2.73□□□□□ -1.97
LMO3Q8TAP4 SNORA40C-201ENST00000391285 128 ntBASIC2.73□□□□□ -1.97
LMO3Q8TAP4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.73□□□□□ -1.97
LMO3Q8TAP4 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.73□□□□□ -1.97
LMO3Q8TAP4 AC092047.1-201ENST00000424997 240 ntBASIC2.73□□□□□ -1.97
LMO3Q8TAP4 AC063976.3-201ENST00000426849 329 ntBASIC2.73□□□□□ -1.97
LMO3Q8TAP4 AC108059.2-201ENST00000434626 151 ntBASIC2.73□□□□□ -1.97
LMO3Q8TAP4 HIGD1AP2-201ENST00000446367 280 ntBASIC2.73□□□□□ -1.97
LMO3Q8TAP4 CHEK2P4-201ENST00000450340 246 ntBASIC2.73□□□□□ -1.97
LMO3Q8TAP4 AC013470.1-201ENST00000453438 462 ntBASIC2.73□□□□□ -1.97
LMO3Q8TAP4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.73□□□□□ -1.97
LMO3Q8TAP4 AL353752.1-201ENST00000454946 260 ntBASIC2.73□□□□□ -1.97
LMO3Q8TAP4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.73□□□□□ -1.97
LMO3Q8TAP4 RPL9P9-202ENST00000466501 579 ntBASIC2.73□□□□□ -1.97
LMO3Q8TAP4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.73□□□□□ -1.97
LMO3Q8TAP4 SRIP1-201ENST00000489235 288 ntBASIC2.73□□□□□ -1.97
LMO3Q8TAP4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.73□□□□□ -1.97
LMO3Q8TAP4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.73□□□□□ -1.97
LMO3Q8TAP4 RNA5SP290-201ENST00000517133 127 ntBASIC2.73□□□□□ -1.97
LMO3Q8TAP4 RNU6-1073P-201ENST00000517182 106 ntBASIC2.73□□□□□ -1.97
LMO3Q8TAP4 AC007536.1-201ENST00000533382 349 ntBASIC2.73□□□□□ -1.97
LMO3Q8TAP4 TRAV28-201ENST00000557548 323 ntBASIC2.73□□□□□ -1.97
LMO3Q8TAP4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.73□□□□□ -1.97
LMO3Q8TAP4 AC136601.2-201ENST00000604356 474 ntBASIC2.73□□□□□ -1.97
LMO3Q8TAP4 MIR7106-201ENST00000612419 65 ntBASIC2.73□□□□□ -1.97
LMO3Q8TAP4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.73□□□□□ -1.97
LMO3Q8TAP4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.73□□□□□ -1.97
LMO3Q8TAP4 CUL1P1-201ENST00000509510 2425 ntBASIC2.72□□□□□ -1.97
LMO3Q8TAP4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LMO3Q8TAP4 CDC27P3-201ENST00000635418 1910 ntBASIC2.72□□□□□ -1.97
LMO3Q8TAP4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LMO3Q8TAP4 RNU6-600P-201ENST00000362524 99 ntBASIC2.72□□□□□ -1.97
LMO3Q8TAP4 Y_RNA.48-201ENST00000362710 103 ntBASIC2.72□□□□□ -1.97
LMO3Q8TAP4 RNA5SP456-201ENST00000364002 114 ntBASIC2.72□□□□□ -1.97
LMO3Q8TAP4 SET-203ENST00000372688 801 ntTSL 2 BASIC2.72□□□□□ -1.97
LMO3Q8TAP4 Y_RNA.389-201ENST00000383924 113 ntBASIC2.72□□□□□ -1.97
LMO3Q8TAP4 RNU6-166P-201ENST00000384371 107 ntBASIC2.72□□□□□ -1.97
LMO3Q8TAP4 RNU6-790P-201ENST00000384479 105 ntBASIC2.72□□□□□ -1.97
LMO3Q8TAP4 Y_RNA.574-201ENST00000384766 95 ntBASIC2.72□□□□□ -1.97
LMO3Q8TAP4 RNU6-1109P-201ENST00000391187 107 ntBASIC2.72□□□□□ -1.97
LMO3Q8TAP4 RNU6-1156P-201ENST00000410365 100 ntBASIC2.72□□□□□ -1.97
LMO3Q8TAP4 RNU2-37P-201ENST00000410695 177 ntBASIC2.72□□□□□ -1.97
LMO3Q8TAP4 PGBD4P6-201ENST00000421501 610 ntBASIC2.72□□□□□ -1.97
LMO3Q8TAP4 NUP35P1-201ENST00000422734 947 ntBASIC2.72□□□□□ -1.97
LMO3Q8TAP4 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms