Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
CLHC1Q8NHS4 AP000560.1-201ENST00000624150 1937 ntBASIC1.23□□□□□ -2.21
CLHC1Q8NHS4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 Y_RNA.332-201ENST00000365271 113 ntBASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 SNORA24.1-201ENST00000384401 135 ntBASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 RNU6-1222P-201ENST00000384615 107 ntBASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 MIR620-201ENST00000385232 95 ntBASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 AL669831.1-202ENST00000428504 417 ntBASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 AL121601.2-201ENST00000438019 707 ntBASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 MTND2P4-201ENST00000445034 1004 ntBASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 AL009048.1-201ENST00000450437 298 ntBASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 AC091951.3-201ENST00000504093 246 ntBASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 AC010587.1-201ENST00000505809 469 ntBASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 Y_RNA.676-201ENST00000516393 96 ntBASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 MTND4LP18-201ENST00000526864 291 ntBASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 SNORA77B-201ENST00000578179 125 ntBASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 AP000811.1-201ENST00000603803 651 ntBASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 AL031281.1-201ENST00000604049 488 ntBASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 AL359999.1-201ENST00000604513 294 ntBASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 AP000654.2-201ENST00000605633 586 ntBASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 MIR8063-201ENST00000621930 81 ntBASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 AL157786.1-207ENST00000627771 695 ntBASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 AC091812.1-201ENST00000432235 1948 ntBASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.22□□□□□ -2.21
CLHC1Q8NHS4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 RNU6-1285P-201ENST00000363480 105 ntBASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 SNORD114-6-201ENST00000364393 72 ntBASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 RNU6-533P-201ENST00000384144 107 ntBASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 MTCYBP36-201ENST00000404146 440 ntBASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 AL357139.1-201ENST00000407792 426 ntBASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 Y_RNA.608-201ENST00000410647 95 ntBASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 AC015922.2-201ENST00000435593 184 ntBASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 RPS24P1-201ENST00000438550 371 ntBASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 AL122001.1-201ENST00000457027 370 ntBASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 RPL30P7-201ENST00000479312 323 ntBASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 AC104806.1-201ENST00000508720 308 ntBASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 RNU5F-2P-201ENST00000516066 82 ntBASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 RNU6-685P-201ENST00000517088 95 ntBASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 AC115990.1-201ENST00000526957 301 ntBASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 AL590240.4-201ENST00000616908 390 ntBASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 ICE2P2-201ENST00000483823 2787 ntBASIC1.21□□□□□ -2.22
CLHC1Q8NHS4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CLHC1Q8NHS4 RNU6-61P-201ENST00000365528 109 ntBASIC1.2□□□□□ -2.22
CLHC1Q8NHS4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.2□□□□□ -2.22
CLHC1Q8NHS4 RNU4-62P-201ENST00000410125 130 ntBASIC1.2□□□□□ -2.22
CLHC1Q8NHS4 RNU2-39P-201ENST00000410604 198 ntBASIC1.2□□□□□ -2.22
CLHC1Q8NHS4 RNU2-41P-201ENST00000410991 178 ntBASIC1.2□□□□□ -2.22
CLHC1Q8NHS4 BTF3P4-201ENST00000418852 495 ntBASIC1.2□□□□□ -2.22
CLHC1Q8NHS4 AL590556.1-201ENST00000423231 483 ntBASIC1.2□□□□□ -2.22
CLHC1Q8NHS4 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.2□□□□□ -2.22
CLHC1Q8NHS4 TOMM22P2-201ENST00000430735 237 ntBASIC1.2□□□□□ -2.22
CLHC1Q8NHS4 AC022447.4-201ENST00000504053 364 ntBASIC1.2□□□□□ -2.22
CLHC1Q8NHS4 AC117522.1-201ENST00000509821 380 ntBASIC1.2□□□□□ -2.22
CLHC1Q8NHS4 RN7SKP179-201ENST00000516126 217 ntBASIC1.2□□□□□ -2.22
CLHC1Q8NHS4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.2□□□□□ -2.22
CLHC1Q8NHS4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.2□□□□□ -2.22
CLHC1Q8NHS4 MIR5692A1-201ENST00000580523 69 ntBASIC1.2□□□□□ -2.22
CLHC1Q8NHS4 AL451064.1-201ENST00000607718 471 ntBASIC1.2□□□□□ -2.22
CLHC1Q8NHS4 AC138749.5-201ENST00000611461 208 ntBASIC1.2□□□□□ -2.22
CLHC1Q8NHS4 AC116165.2-201ENST00000616705 206 ntBASIC1.2□□□□□ -2.22
CLHC1Q8NHS4 MTND5P9-201ENST00000503854 1755 ntBASIC1.2□□□□□ -2.22
CLHC1Q8NHS4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
CLHC1Q8NHS4 Y_RNA.22-201ENST00000362492 102 ntBASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 SNORD33-201ENST00000362761 85 ntBASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 RNU6-112P-201ENST00000363599 104 ntBASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 SNORD1A-201ENST00000364968 72 ntBASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 RNU2-3P-201ENST00000410144 191 ntBASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 RNU6-607P-201ENST00000411283 108 ntBASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 RNU6-387P-201ENST00000411331 105 ntBASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 RPL37P10-201ENST00000412884 288 ntBASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 RPL21P90-201ENST00000415692 466 ntBASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 AC106883.1-201ENST00000418805 562 ntBASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 AC139712.2-201ENST00000424302 339 ntBASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 MTCO2P23-201ENST00000425216 680 ntBASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 MTND5P25-201ENST00000430499 799 ntBASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 AC119618.1-201ENST00000434191 222 ntBASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 AL022238.1-201ENST00000442557 355 ntBASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 KATNBL1P3-201ENST00000443475 909 ntBASIC1.19□□□□□ -2.22
CLHC1Q8NHS4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms