Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 SNORD116-20-201ENST00000384529 92 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 RNU6-1235P-201ENST00000384559 107 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 MIR19A-201ENST00000384878 82 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 SNORD89-201ENST00000390981 114 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 SNORA12.2-201ENST00000391040 156 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 BTF3L4P1-201ENST00000413813 468 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 MTCO3P41-201ENST00000414801 328 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 MTND4P20-201ENST00000424125 869 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 RPL18AP17-201ENST00000455326 198 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 RNU6-498P-201ENST00000459468 107 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 AC092991.1-201ENST00000477176 376 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 AC022493.2-201ENST00000506122 481 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 ATP5EP1-201ENST00000510257 156 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 AF131216.2-201ENST00000512316 564 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 AC008837.2-201ENST00000513076 418 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 MTCO3P28-201ENST00000513351 515 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 RNU6-64P-201ENST00000517119 105 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 SUMO2P16-201ENST00000519475 264 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 CYP3A137P-201ENST00000562436 69 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 MIR1273C-201ENST00000578669 77 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 AL031281.1-201ENST00000604049 488 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 AL355816.2-201ENST00000610049 647 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 AL353149.1-201ENST00000610667 244 ntBASIC0.06□□□□□ -2.4
SPTSSBQ8NFR3 OR4G2P-201ENST00000328113 903 ntBASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 Y_RNA.33-201ENST00000362591 102 ntBASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 RNU6-163P-201ENST00000384396 106 ntBASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 AL079342.2-201ENST00000403367 482 ntBASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 SNRPFP3-201ENST00000457792 225 ntBASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 AC105313.1-201ENST00000509121 353 ntBASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 AC027338.1-201ENST00000514840 825 ntBASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 RNU1-41P-201ENST00000516161 162 ntBASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 RNU1-48P-201ENST00000516400 162 ntBASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 RNA5SP384-201ENST00000516615 116 ntBASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 AC087854.1-201ENST00000519706 414 ntBASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 MTND1P36-201ENST00000522384 936 ntBASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 AC011979.2-201ENST00000527568 352 ntBASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 AP000907.2-201ENST00000530827 353 ntBASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 AC122134.1-202ENST00000569111 1201 ntBASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 AC060771.1-201ENST00000582031 164 ntBASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 AC007363.1-201ENST00000604736 620 ntBASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 AL356157.2-201ENST00000605122 111 ntBASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 AL138726.1-201ENST00000614873 333 ntBASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 AL138955.1-201ENST00000622881 1040 ntBASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 CASC19-280ENST00000642102 1351 ntBASIC0.05□□□□□ -2.4
SPTSSBQ8NFR3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
SPTSSBQ8NFR3 U3.9-201ENST00000363823 204 ntBASIC0.04□□□□□ -2.4
SPTSSBQ8NFR3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.04□□□□□ -2.4
SPTSSBQ8NFR3 SNORA32.2-201ENST00000384049 122 ntBASIC0.04□□□□□ -2.4
SPTSSBQ8NFR3 AC068533.2-201ENST00000411872 306 ntBASIC0.04□□□□□ -2.4
SPTSSBQ8NFR3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.04□□□□□ -2.4
SPTSSBQ8NFR3 MTND4P25-201ENST00000441039 533 ntBASIC0.04□□□□□ -2.4
SPTSSBQ8NFR3 RPEP5-201ENST00000441137 268 ntBASIC0.04□□□□□ -2.4
SPTSSBQ8NFR3 AL583843.1-201ENST00000456070 346 ntBASIC0.04□□□□□ -2.4
SPTSSBQ8NFR3 AC026414.1-201ENST00000504046 698 ntBASIC0.04□□□□□ -2.4
SPTSSBQ8NFR3 RNU5F-2P-201ENST00000516066 82 ntBASIC0.04□□□□□ -2.4
SPTSSBQ8NFR3 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.04□□□□□ -2.4
SPTSSBQ8NFR3 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.04□□□□□ -2.4
SPTSSBQ8NFR3 MIR4431-201ENST00000579990 94 ntBASIC0.04□□□□□ -2.4
SPTSSBQ8NFR3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.04□□□□□ -2.4
SPTSSBQ8NFR3 MIR3136-201ENST00000583498 78 ntBASIC0.04□□□□□ -2.4
SPTSSBQ8NFR3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.04□□□□□ -2.4
SPTSSBQ8NFR3 AL360219.1-201ENST00000610230 366 ntBASIC0.04□□□□□ -2.4
SPTSSBQ8NFR3 GHRLOS.1-201ENST00000610995 70 ntBASIC0.04□□□□□ -2.4
SPTSSBQ8NFR3 MIR6852-201ENST00000621699 66 ntBASIC0.04□□□□□ -2.4
SPTSSBQ8NFR3 AC068787.1-201ENST00000623908 691 ntBASIC0.04□□□□□ -2.4
SPTSSBQ8NFR3 MTND5P42-201ENST00000637720 498 ntBASIC0.04□□□□□ -2.4
SPTSSBQ8NFR3 MTND4P5-201ENST00000435821 1374 ntBASIC0.04□□□□□ -2.4
SPTSSBQ8NFR3 MTND5P16-201ENST00000460269 1703 ntBASIC0.04□□□□□ -2.4
SPTSSBQ8NFR3 AC245060.5-201ENST00000610778 3293 ntBASIC0.03□□□□□ -2.4
SPTSSBQ8NFR3 RNU4-15P-201ENST00000362613 141 ntBASIC0.03□□□□□ -2.4
SPTSSBQ8NFR3 SNORD114-27-201ENST00000363766 70 ntBASIC0.03□□□□□ -2.4
SPTSSBQ8NFR3 RNU6-53P-201ENST00000365367 106 ntBASIC0.03□□□□□ -2.4
SPTSSBQ8NFR3 RNU6-395P-201ENST00000365662 106 ntBASIC0.03□□□□□ -2.4
SPTSSBQ8NFR3 RNU6-1122P-201ENST00000384449 107 ntBASIC0.03□□□□□ -2.4
SPTSSBQ8NFR3 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.03□□□□□ -2.4
SPTSSBQ8NFR3 SNORA16.2-201ENST00000390991 127 ntBASIC0.03□□□□□ -2.4
SPTSSBQ8NFR3 SNORA12-201ENST00000391162 147 ntBASIC0.03□□□□□ -2.4
SPTSSBQ8NFR3 SNORD99-201ENST00000408612 74 ntBASIC0.03□□□□□ -2.4
SPTSSBQ8NFR3 DAP3P1-201ENST00000441522 278 ntBASIC0.03□□□□□ -2.4
SPTSSBQ8NFR3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.03□□□□□ -2.4
SPTSSBQ8NFR3 TOMM22P6-201ENST00000465035 409 ntBASIC0.03□□□□□ -2.4
SPTSSBQ8NFR3 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.03□□□□□ -2.4
SPTSSBQ8NFR3 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.03□□□□□ -2.4
SPTSSBQ8NFR3 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.03□□□□□ -2.4
SPTSSBQ8NFR3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.03□□□□□ -2.4
SPTSSBQ8NFR3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.03□□□□□ -2.4
SPTSSBQ8NFR3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.03□□□□□ -2.4
SPTSSBQ8NFR3 AL132657.2-201ENST00000564417 358 ntBASIC0.03□□□□□ -2.4
SPTSSBQ8NFR3 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC0.03□□□□□ -2.4
SPTSSBQ8NFR3 RAC1P9-201ENST00000604990 392 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms