Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.79□□□□□ -2.28
ZNF439Q8NDP4 AC123904.2-201ENST00000548059 300 ntBASIC0.79□□□□□ -2.28
ZNF439Q8NDP4 AP003465.2-201ENST00000602571 373 ntBASIC0.79□□□□□ -2.28
ZNF439Q8NDP4 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.79□□□□□ -2.28
ZNF439Q8NDP4 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.79□□□□□ -2.28
ZNF439Q8NDP4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
ZNF439Q8NDP4 AC012676.2-201ENST00000619258 186 ntBASIC0.79□□□□□ -2.28
ZNF439Q8NDP4 AC091895.1-201ENST00000624494 256 ntBASIC0.79□□□□□ -2.28
ZNF439Q8NDP4 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.79□□□□□ -2.28
ZNF439Q8NDP4 SNORD56.1-201ENST00000362913 68 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 Y_RNA.255-201ENST00000364581 97 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 RNU6-360P-201ENST00000390944 104 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 RPL23AP32-201ENST00000395315 459 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 RPS3AP36-201ENST00000398190 775 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 MRPL35P1-201ENST00000404272 572 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 AL161935.2-201ENST00000414627 60 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 RPL21P111-201ENST00000418453 477 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 EIF1P1-201ENST00000421436 341 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 AL589872.1-201ENST00000426602 288 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 MTND1P30-201ENST00000441241 901 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 PRPS1P1-201ENST00000445305 876 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 PGBD4P5-201ENST00000445958 426 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 COX6CP14-201ENST00000469580 174 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 AC097473.1-201ENST00000508142 408 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 RNU6-1053P-201ENST00000515930 101 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 SNORA3.4-201ENST00000515969 96 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 MIR449C-201ENST00000516047 92 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 RNU7-51P-201ENST00000516560 62 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 BNIP3P10-201ENST00000605360 577 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 AL020996.3-201ENST00000606617 222 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 AC080013.3-201ENST00000606839 578 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 RMST_7.1-201ENST00000621935 268 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 AC099654.5-201ENST00000636479 350 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 AL445523.1-201ENST00000451184 1362 ntBASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.78□□□□□ -2.28
ZNF439Q8NDP4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
ZNF439Q8NDP4 AC073343.1-201ENST00000328239 651 ntBASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 RNU4-92P-201ENST00000363783 136 ntBASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 RNU1-124P-201ENST00000363861 145 ntBASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 RNU6-384P-201ENST00000364900 104 ntBASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 RPS20P2-201ENST00000402520 389 ntBASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 RPL22P18-201ENST00000417197 377 ntBASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 EBAG9P1-201ENST00000418955 543 ntBASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 MTND1P32-201ENST00000433043 938 ntBASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 HSPE1P9-201ENST00000440046 311 ntBASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 MTND1P12-201ENST00000455231 147 ntBASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 TOMM22P6-201ENST00000465035 409 ntBASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 AC005840.1-201ENST00000498412 377 ntBASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 RNA5SP490-201ENST00000517141 136 ntBASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 AC107934.1-201ENST00000522215 217 ntBASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 AC115990.1-201ENST00000526957 301 ntBASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 ADI1P3-201ENST00000549509 470 ntBASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 AC015688.6-201ENST00000577737 104 ntBASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 AC018889.1-201ENST00000605372 397 ntBASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 AC121334.2-201ENST00000605387 271 ntBASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 AP002360.4-201ENST00000606980 481 ntBASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 AC097478.2-201ENST00000610572 514 ntBASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 MIR8065-201ENST00000620577 100 ntBASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 AL138960.2-201ENST00000625145 535 ntBASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 OR4G3P-201ENST00000633500 913 ntBASIC0.77□□□□□ -2.29
ZNF439Q8NDP4 RNU4-68P-201ENST00000364314 141 ntBASIC0.76□□□□□ -2.29
ZNF439Q8NDP4 SNORD32B-201ENST00000364460 84 ntBASIC0.76□□□□□ -2.29
ZNF439Q8NDP4 RNY4P16-201ENST00000364768 94 ntBASIC0.76□□□□□ -2.29
ZNF439Q8NDP4 RNU6-968P-201ENST00000384076 107 ntBASIC0.76□□□□□ -2.29
ZNF439Q8NDP4 RNU6-1179P-201ENST00000384667 107 ntBASIC0.76□□□□□ -2.29
ZNF439Q8NDP4 RNU6-1242P-201ENST00000391052 103 ntBASIC0.76□□□□□ -2.29
ZNF439Q8NDP4 SNORA12-201ENST00000391162 147 ntBASIC0.76□□□□□ -2.29
ZNF439Q8NDP4 AL031779.1-201ENST00000415663 330 ntBASIC0.76□□□□□ -2.29
ZNF439Q8NDP4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.76□□□□□ -2.29
ZNF439Q8NDP4 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.76□□□□□ -2.29
ZNF439Q8NDP4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
ZNF439Q8NDP4 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.76□□□□□ -2.29
ZNF439Q8NDP4 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.76□□□□□ -2.29
ZNF439Q8NDP4 AC007969.2-201ENST00000441891 191 ntBASIC0.76□□□□□ -2.29
ZNF439Q8NDP4 MTND5P2-201ENST00000442927 1142 ntBASIC0.76□□□□□ -2.29
ZNF439Q8NDP4 AC244505.5-201ENST00000443639 207 ntBASIC0.76□□□□□ -2.29
ZNF439Q8NDP4 Z73417.1-201ENST00000447373 778 ntBASIC0.76□□□□□ -2.29
ZNF439Q8NDP4 FTH1P25-201ENST00000447665 469 ntBASIC0.76□□□□□ -2.29
ZNF439Q8NDP4 RPS27P1-201ENST00000450552 247 ntBASIC0.76□□□□□ -2.29
ZNF439Q8NDP4 RPS27AP8-201ENST00000452665 445 ntBASIC0.76□□□□□ -2.29
ZNF439Q8NDP4 AL122001.1-201ENST00000457027 370 ntBASIC0.76□□□□□ -2.29
ZNF439Q8NDP4 RPL9P9-202ENST00000466501 579 ntBASIC0.76□□□□□ -2.29
ZNF439Q8NDP4 ARL2BPP4-201ENST00000506854 471 ntBASIC0.76□□□□□ -2.29
ZNF439Q8NDP4 MTCO3P9-201ENST00000506989 781 ntBASIC0.76□□□□□ -2.29
ZNF439Q8NDP4 AC005741.1-201ENST00000511094 432 ntBASIC0.76□□□□□ -2.29
ZNF439Q8NDP4 SNORD116-28-201ENST00000516123 91 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 1066.5 ms