Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 AC107304.1-201ENST00000604229 296 ntBASIC2.58□□□□□ -2
TTC39CQ8N584 AL121757.2-201ENST00000611223 313 ntBASIC2.58□□□□□ -2
TTC39CQ8N584 AC241585.2-209ENST00000638217 143 ntBASIC2.58□□□□□ -2
TTC39CQ8N584 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TTC39CQ8N584 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
TTC39CQ8N584 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
TTC39CQ8N584 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.57□□□□□ -2
TTC39CQ8N584 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.57□□□□□ -2
TTC39CQ8N584 RNU6-373P-201ENST00000411247 98 ntBASIC2.57□□□□□ -2
TTC39CQ8N584 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.57□□□□□ -2
TTC39CQ8N584 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.57□□□□□ -2
TTC39CQ8N584 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.57□□□□□ -2
TTC39CQ8N584 SNORA48.11-201ENST00000517015 89 ntBASIC2.57□□□□□ -2
TTC39CQ8N584 RNU6-586P-201ENST00000517265 104 ntBASIC2.57□□□□□ -2
TTC39CQ8N584 AL670379.2-201ENST00000604983 252 ntBASIC2.57□□□□□ -2
TTC39CQ8N584 AC103810.6-201ENST00000606708 136 ntBASIC2.57□□□□□ -2
TTC39CQ8N584 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
TTC39CQ8N584 AC098679.4-201ENST00000624241 654 ntBASIC2.57□□□□□ -2
TTC39CQ8N584 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TTC39CQ8N584 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.56□□□□□ -2
TTC39CQ8N584 RNU6-1285P-201ENST00000363480 105 ntBASIC2.56□□□□□ -2
TTC39CQ8N584 RNU6-1141P-201ENST00000364520 107 ntBASIC2.56□□□□□ -2
TTC39CQ8N584 Y_RNA.256-201ENST00000364594 104 ntBASIC2.56□□□□□ -2
TTC39CQ8N584 RNU6-692P-201ENST00000384496 107 ntBASIC2.56□□□□□ -2
TTC39CQ8N584 RNU6-192P-201ENST00000391253 100 ntBASIC2.56□□□□□ -2
TTC39CQ8N584 RNA5SP181-201ENST00000410246 98 ntBASIC2.56□□□□□ -2
TTC39CQ8N584 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.56□□□□□ -2
TTC39CQ8N584 SNAP23P1-201ENST00000433229 246 ntBASIC2.56□□□□□ -2
TTC39CQ8N584 USP9YP8-201ENST00000441913 500 ntBASIC2.56□□□□□ -2
TTC39CQ8N584 AL359672.1-201ENST00000442302 409 ntBASIC2.56□□□□□ -2
TTC39CQ8N584 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.56□□□□□ -2
TTC39CQ8N584 RNU6-1037P-201ENST00000459571 107 ntBASIC2.56□□□□□ -2
TTC39CQ8N584 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.56□□□□□ -2
TTC39CQ8N584 AC234781.5-201ENST00000508429 271 ntBASIC2.56□□□□□ -2
TTC39CQ8N584 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.56□□□□□ -2
TTC39CQ8N584 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.56□□□□□ -2
TTC39CQ8N584 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.56□□□□□ -2
TTC39CQ8N584 BNIP3P25-201ENST00000596023 559 ntBASIC2.56□□□□□ -2
TTC39CQ8N584 AC090517.2-201ENST00000614966 680 ntBASIC2.56□□□□□ -2
TTC39CQ8N584 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.56□□□□□ -2
TTC39CQ8N584 AC073869.6-201ENST00000640656 341 ntBASIC2.56□□□□□ -2
TTC39CQ8N584 AP000560.1-201ENST00000624150 1937 ntBASIC2.56□□□□□ -2
TTC39CQ8N584 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.56□□□□□ -2
TTC39CQ8N584 Y_RNA.89-201ENST00000363031 102 ntBASIC2.55□□□□□ -2
TTC39CQ8N584 RNU6-877P-201ENST00000383868 107 ntBASIC2.55□□□□□ -2
TTC39CQ8N584 MIR29B2-201ENST00000385055 81 ntBASIC2.55□□□□□ -2
TTC39CQ8N584 MIR561-201ENST00000385216 97 ntBASIC2.55□□□□□ -2
TTC39CQ8N584 SNORD73A-201ENST00000386062 65 ntBASIC2.55□□□□□ -2
TTC39CQ8N584 AF274854.1-201ENST00000413236 615 ntBASIC2.55□□□□□ -2
TTC39CQ8N584 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.55□□□□□ -2
TTC39CQ8N584 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.55□□□□□ -2
TTC39CQ8N584 HMGN2P26-201ENST00000463169 339 ntBASIC2.55□□□□□ -2
TTC39CQ8N584 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.55□□□□□ -2
TTC39CQ8N584 AC082651.2-201ENST00000496833 166 ntBASIC2.55□□□□□ -2
TTC39CQ8N584 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.55□□□□□ -2
TTC39CQ8N584 AC026436.1-201ENST00000510537 270 ntBASIC2.55□□□□□ -2
TTC39CQ8N584 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.55□□□□□ -2
TTC39CQ8N584 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.55□□□□□ -2
TTC39CQ8N584 RN7SKP256-201ENST00000517201 314 ntBASIC2.55□□□□□ -2
TTC39CQ8N584 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.55□□□□□ -2
TTC39CQ8N584 AP005597.4-201ENST00000526762 229 ntBASIC2.55□□□□□ -2
TTC39CQ8N584 AC021269.2-201ENST00000532318 330 ntBASIC2.55□□□□□ -2
TTC39CQ8N584 AP002770.2-201ENST00000543613 532 ntBASIC2.55□□□□□ -2
TTC39CQ8N584 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.55□□□□□ -2
TTC39CQ8N584 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.55□□□□□ -2
TTC39CQ8N584 AC024614.3-201ENST00000637860 256 ntBASIC2.55□□□□□ -2
TTC39CQ8N584 U8.8-201ENST00000365399 135 ntBASIC2.54□□□□□ -2
TTC39CQ8N584 RNU6-1329P-201ENST00000365664 107 ntBASIC2.54□□□□□ -2
TTC39CQ8N584 RNU1-52P-201ENST00000384190 164 ntBASIC2.54□□□□□ -2
TTC39CQ8N584 RNU6-43P-201ENST00000384302 107 ntBASIC2.54□□□□□ -2
TTC39CQ8N584 C8orf59P1-201ENST00000429930 303 ntBASIC2.54□□□□□ -2
TTC39CQ8N584 MRPS10P2-201ENST00000431226 381 ntBASIC2.54□□□□□ -2
TTC39CQ8N584 NDUFA5P4-201ENST00000436704 385 ntBASIC2.54□□□□□ -2
TTC39CQ8N584 UBE2V1P8-201ENST00000437166 265 ntBASIC2.54□□□□□ -2
TTC39CQ8N584 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.54□□□□□ -2
TTC39CQ8N584 AL139109.1-201ENST00000455491 297 ntBASIC2.54□□□□□ -2
TTC39CQ8N584 AC083904.1-201ENST00000487828 231 ntBASIC2.54□□□□□ -2
TTC39CQ8N584 RN7SL636P-201ENST00000497504 294 ntBASIC2.54□□□□□ -2
TTC39CQ8N584 AC022447.4-201ENST00000504053 364 ntBASIC2.54□□□□□ -2
TTC39CQ8N584 Y_RNA.665-201ENST00000516177 98 ntBASIC2.54□□□□□ -2
TTC39CQ8N584 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.54□□□□□ -2
TTC39CQ8N584 AC025423.5-201ENST00000550230 219 ntBASIC2.54□□□□□ -2
TTC39CQ8N584 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.54□□□□□ -2
TTC39CQ8N584 MIR5007-201ENST00000583098 95 ntBASIC2.54□□□□□ -2
TTC39CQ8N584 AC080078.2-201ENST00000603766 501 ntBASIC2.54□□□□□ -2
TTC39CQ8N584 AC090517.3-201ENST00000625170 141 ntBASIC2.54□□□□□ -2
TTC39CQ8N584 AC243829.7-201ENST00000633081 225 ntBASIC2.54□□□□□ -2
TTC39CQ8N584 MIR3688-2-201ENST00000636963 87 ntBASIC2.54□□□□□ -2
TTC39CQ8N584 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.54□□□□□ -2
TTC39CQ8N584 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.54□□□□□ -2
TTC39CQ8N584 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.54□□□□□ -2
TTC39CQ8N584 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
TTC39CQ8N584 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.53□□□□□ -2
TTC39CQ8N584 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TTC39CQ8N584 U3.13-201ENST00000364804 214 ntBASIC2.53□□□□□ -2
TTC39CQ8N584 Y_RNA.373-201ENST00000365600 103 ntBASIC2.53□□□□□ -2
TTC39CQ8N584 RNU6-1032P-201ENST00000384100 107 ntBASIC2.53□□□□□ -2
TTC39CQ8N584 RNU6-214P-201ENST00000384130 107 ntBASIC2.53□□□□□ -2
TTC39CQ8N584 Y_RNA.453-201ENST00000384223 109 ntBASIC2.53□□□□□ -2
TTC39CQ8N584 SNORA67.4-201ENST00000384688 142 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms