Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 U2.6-201ENST00000619225 191 ntBASIC2.35□□□□□ -2.03
CCDC60Q8IWA6 U2.5-201ENST00000619465 191 ntBASIC2.35□□□□□ -2.03
CCDC60Q8IWA6 U2.10-201ENST00000620268 191 ntBASIC2.35□□□□□ -2.03
CCDC60Q8IWA6 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC60Q8IWA6 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC60Q8IWA6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 AC005336.3-201ENST00000623833 2679 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 RNU6-451P-201ENST00000362921 107 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 RNU6-486P-201ENST00000363116 107 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 RNY4P14-201ENST00000363656 96 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 RNY3P3-201ENST00000363816 102 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 RNU1-52P-201ENST00000384190 164 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 Y_RNA.453-201ENST00000384223 109 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 RNU6-843P-201ENST00000384454 104 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 Y_RNA.619-201ENST00000410951 90 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 FCF1P9-201ENST00000412546 282 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 AL139156.1-201ENST00000412785 841 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 AC097463.2-201ENST00000421074 142 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 HMGN2P3-201ENST00000433603 273 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 HMGN2P5-201ENST00000436882 273 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 AC117503.1-201ENST00000472241 394 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 Y_RNA.654-201ENST00000497848 106 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 RPL38P4-201ENST00000502376 214 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 AC079140.5-201ENST00000507882 310 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 RNU6-377P-201ENST00000515965 102 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 SCARNA3-201ENST00000517097 143 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 HSPE1P18-201ENST00000517602 280 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 MIR3941-201ENST00000582572 103 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 AL158827.2-201ENST00000602494 330 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 AL121757.2-201ENST00000611223 313 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 AL691447.3-201ENST00000635020 330 ntBASIC2.34□□□□□ -2.03
CCDC60Q8IWA6 RNU6-877P-201ENST00000383868 107 ntBASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 MIR514A2-201ENST00000385131 88 ntBASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 MIR514A3-201ENST00000385132 88 ntBASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 SNORD56-201ENST00000413522 71 ntBASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 AC074117.2-201ENST00000417130 397 ntBASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 USP9YP18-201ENST00000425912 695 ntBASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 AL445646.1-201ENST00000431784 216 ntBASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 AL591043.1-201ENST00000432461 424 ntBASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 ERLEC1P1-201ENST00000433806 578 ntBASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 UBE2V1P8-201ENST00000437166 265 ntBASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 RNU6-1208P-201ENST00000459588 107 ntBASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 AC091885.1-201ENST00000506658 268 ntBASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 SNORA14.1-201ENST00000516113 141 ntBASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 SNORA31.23-201ENST00000517219 133 ntBASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 MIR5002-201ENST00000584713 97 ntBASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 AC104984.5-201ENST00000586878 94 ntBASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 RNU6-89P-201ENST00000606519 100 ntBASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 AL357078.3-201ENST00000607528 618 ntBASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 MIR7157-201ENST00000635801 60 ntBASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 U4.7-201ENST00000638126 106 ntBASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC60Q8IWA6 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 RNU6-428P-201ENST00000362942 107 ntBASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 Y_RNA.89-201ENST00000363031 102 ntBASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 RNU6-82P-201ENST00000363970 107 ntBASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 Y_RNA.295-201ENST00000364918 102 ntBASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 Y_RNA.505-201ENST00000384489 102 ntBASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 Y_RNA.573-201ENST00000384763 105 ntBASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 MIR524-201ENST00000385242 87 ntBASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 Y_RNA.615-201ENST00000410769 117 ntBASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 RPL7P12-201ENST00000446719 750 ntBASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 RPL7P43-201ENST00000478876 753 ntBASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 AP001025.1-201ENST00000486139 332 ntBASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 AC083904.1-201ENST00000487828 231 ntBASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 AC140059.1-201ENST00000489238 361 ntBASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 MTCYBP40-201ENST00000509390 1135 ntBASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 AC011352.1-201ENST00000512300 793 ntBASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 SNORA19.2-201ENST00000516013 114 ntBASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 RNU6-323P-201ENST00000521915 107 ntBASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 CYCSP27-201ENST00000527643 293 ntBASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 AL121917.1-203ENST00000605534 577 ntBASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 RNU6-91P-201ENST00000607774 107 ntBASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 AC096772.1-201ENST00000609146 564 ntBASIC2.32□□□□□ -2.04
CCDC60Q8IWA6 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms