Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC113410.1-201ENST00000505029 247 ntBASIC-0.56□□□□□ -2.5
VPS13CQ709C8 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC-0.56□□□□□ -2.5
VPS13CQ709C8 AL355802.4-201ENST00000607635 548 ntBASIC-0.56□□□□□ -2.5
VPS13CQ709C8 AC027309.3-201ENST00000623419 351 ntBASIC-0.56□□□□□ -2.5
VPS13CQ709C8 RNU4-16P-201ENST00000364737 141 ntBASIC-0.56□□□□□ -2.5
VPS13CQ709C8 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC-0.56□□□□□ -2.5
VPS13CQ709C8 MTND1P9-201ENST00000453775 944 ntBASIC-0.56□□□□□ -2.5
VPS13CQ709C8 SNRPGP16-201ENST00000533275 226 ntBASIC-0.56□□□□□ -2.5
VPS13CQ709C8 AL353765.1-201ENST00000605514 183 ntBASIC-0.56□□□□□ -2.5
VPS13CQ709C8 RNU6-756P-201ENST00000383997 107 ntBASIC-0.56□□□□□ -2.5
VPS13CQ709C8 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.56□□□□□ -2.5
VPS13CQ709C8 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC-0.56□□□□□ -2.5
VPS13CQ709C8 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC-0.56□□□□□ -2.5
VPS13CQ709C8 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC-0.57□□□□□ -2.5
VPS13CQ709C8 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.57□□□□□ -2.5
VPS13CQ709C8 RNU6-360P-201ENST00000390944 104 ntBASIC-0.57□□□□□ -2.5
VPS13CQ709C8 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
VPS13CQ709C8 MIR325-201ENST00000385260 98 ntBASIC-0.57□□□□□ -2.5
VPS13CQ709C8 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.57□□□□□ -2.5
VPS13CQ709C8 LRRC34P1-201ENST00000542742 915 ntBASIC-0.57□□□□□ -2.5
VPS13CQ709C8 BNIP3P31-201ENST00000604515 566 ntBASIC-0.57□□□□□ -2.5
VPS13CQ709C8 AC010809.3-201ENST00000621310 641 ntBASIC-0.57□□□□□ -2.5
VPS13CQ709C8 RNY1P8-201ENST00000383970 114 ntBASIC-0.57□□□□□ -2.5
VPS13CQ709C8 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.57□□□□□ -2.5
VPS13CQ709C8 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC-0.57□□□□□ -2.5
VPS13CQ709C8 U7.7-201ENST00000459276 60 ntBASIC-0.57□□□□□ -2.5
VPS13CQ709C8 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.57□□□□□ -2.5
VPS13CQ709C8 RNU1-39P-201ENST00000383897 165 ntBASIC-0.58□□□□□ -2.5
VPS13CQ709C8 HNRNPDP2-201ENST00000406475 478 ntBASIC-0.58□□□□□ -2.5
VPS13CQ709C8 RNU1-131P-201ENST00000458943 161 ntBASIC-0.58□□□□□ -2.5
VPS13CQ709C8 AC048334.1-201ENST00000477975 159 ntBASIC-0.58□□□□□ -2.5
VPS13CQ709C8 AC105029.1-201ENST00000520250 669 ntBASIC-0.58□□□□□ -2.5
VPS13CQ709C8 MED28P6-201ENST00000558776 231 ntBASIC-0.58□□□□□ -2.5
VPS13CQ709C8 NAMPTP3-201ENST00000569273 224 ntBASIC-0.58□□□□□ -2.5
VPS13CQ709C8 ANKRD36BP2-206ENST00000575193 1245 ntBASIC-0.58□□□□□ -2.5
VPS13CQ709C8 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC-0.58□□□□□ -2.5
VPS13CQ709C8 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.58□□□□□ -2.5
VPS13CQ709C8 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.58□□□□□ -2.5
VPS13CQ709C8 SNORA77B-201ENST00000578179 125 ntBASIC-0.58□□□□□ -2.5
VPS13CQ709C8 AC069304.3-201ENST00000603938 1084 ntBASIC-0.58□□□□□ -2.5
VPS13CQ709C8 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.58□□□□□ -2.5
VPS13CQ709C8 AC116563.2-201ENST00000624751 535 ntBASIC-0.58□□□□□ -2.5
VPS13CQ709C8 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC-0.58□□□□□ -2.5
VPS13CQ709C8 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.58□□□□□ -2.5
VPS13CQ709C8 RNU2-49P-201ENST00000410666 184 ntBASIC-0.58□□□□□ -2.5
VPS13CQ709C8 MTCO2P34-201ENST00000421994 607 ntBASIC-0.58□□□□□ -2.5
VPS13CQ709C8 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC-0.58□□□□□ -2.5
VPS13CQ709C8 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.58□□□□□ -2.5
VPS13CQ709C8 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.58□□□□□ -2.5
VPS13CQ709C8 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.59□□□□□ -2.5
VPS13CQ709C8 RNA5SP100-201ENST00000410903 110 ntBASIC-0.59□□□□□ -2.5
VPS13CQ709C8 RNA5SP59-201ENST00000410922 110 ntBASIC-0.59□□□□□ -2.5
VPS13CQ709C8 5S_rRNA.3-201ENST00000517021 110 ntBASIC-0.59□□□□□ -2.5
VPS13CQ709C8 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC-0.59□□□□□ -2.5
VPS13CQ709C8 5S_rRNA.19-201ENST00000612131 110 ntBASIC-0.59□□□□□ -2.5
VPS13CQ709C8 5S_rRNA.18-201ENST00000621941 110 ntBASIC-0.59□□□□□ -2.5
VPS13CQ709C8 RNU6-910P-201ENST00000390844 107 ntBASIC-0.59□□□□□ -2.5
VPS13CQ709C8 RNU6-269P-201ENST00000391077 97 ntBASIC-0.59□□□□□ -2.5
VPS13CQ709C8 TAF9BP2-201ENST00000400856 499 ntBASIC-0.59□□□□□ -2.5
VPS13CQ709C8 RPS15AP10-201ENST00000432472 382 ntBASIC-0.59□□□□□ -2.5
VPS13CQ709C8 AC023347.2-201ENST00000433994 462 ntBASIC-0.59□□□□□ -2.5
VPS13CQ709C8 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.59□□□□□ -2.5
VPS13CQ709C8 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC-0.59□□□□□ -2.5
VPS13CQ709C8 ADAM3B-201ENST00000569937 840 ntBASIC-0.59□□□□□ -2.5
VPS13CQ709C8 AC007151.1-201ENST00000572774 483 ntBASIC-0.59□□□□□ -2.5
VPS13CQ709C8 AC096586.2-201ENST00000610260 441 ntBASIC-0.59□□□□□ -2.5
VPS13CQ709C8 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.59□□□□□ -2.5
VPS13CQ709C8 DSTNP4-201ENST00000399472 474 ntBASIC-0.59□□□□□ -2.5
VPS13CQ709C8 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.59□□□□□ -2.5
VPS13CQ709C8 AL035398.1-201ENST00000430869 322 ntBASIC-0.59□□□□□ -2.5
VPS13CQ709C8 MIR3664-201ENST00000579074 99 ntBASIC-0.59□□□□□ -2.5
VPS13CQ709C8 MIR4436A-201ENST00000585278 85 ntBASIC-0.59□□□□□ -2.5
VPS13CQ709C8 BNIP3P27-201ENST00000599991 412 ntBASIC-0.59□□□□□ -2.5
VPS13CQ709C8 AC012065.4-201ENST00000602445 679 ntBASIC-0.59□□□□□ -2.5
VPS13CQ709C8 AL009028.1-201ENST00000604895 802 ntBASIC-0.59□□□□□ -2.5
VPS13CQ709C8 MTCO3P43-201ENST00000440974 771 ntBASIC-0.6□□□□□ -2.51
VPS13CQ709C8 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC-0.6□□□□□ -2.51
VPS13CQ709C8 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC-0.6□□□□□ -2.51
VPS13CQ709C8 RNU6-1092P-201ENST00000516955 87 ntBASIC-0.6□□□□□ -2.51
VPS13CQ709C8 AC022616.3-201ENST00000523940 148 ntBASIC-0.6□□□□□ -2.51
VPS13CQ709C8 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC-0.6□□□□□ -2.51
VPS13CQ709C8 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC-0.6□□□□□ -2.51
VPS13CQ709C8 AC019226.1-201ENST00000625666 515 ntBASIC-0.6□□□□□ -2.51
VPS13CQ709C8 RNU4-23P-201ENST00000362839 140 ntBASIC-0.6□□□□□ -2.51
VPS13CQ709C8 AC026271.5-201ENST00000577873 130 ntBASIC-0.6□□□□□ -2.51
VPS13CQ709C8 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC-0.6□□□□□ -2.51
VPS13CQ709C8 AC091057.3-201ENST00000602684 733 ntBASIC-0.6□□□□□ -2.51
VPS13CQ709C8 AC013468.1-201ENST00000608680 598 ntBASIC-0.6□□□□□ -2.51
VPS13CQ709C8 MIR412-201ENST00000362142 91 ntBASIC-0.6□□□□□ -2.51
VPS13CQ709C8 MIR1302-8-201ENST00000408342 128 ntBASIC-0.6□□□□□ -2.51
VPS13CQ709C8 AC024405.2-202ENST00000532731 184 ntBASIC-0.6□□□□□ -2.51
VPS13CQ709C8 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC-0.6□□□□□ -2.51
VPS13CQ709C8 AL353621.1-201ENST00000418219 243 ntBASIC-0.61□□□□□ -2.51
VPS13CQ709C8 NFU1P2-201ENST00000448700 469 ntBASIC-0.61□□□□□ -2.51
VPS13CQ709C8 SNORA27.4-201ENST00000516650 95 ntBASIC-0.61□□□□□ -2.51
VPS13CQ709C8 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC-0.61□□□□□ -2.51
VPS13CQ709C8 NDUFA5P10-201ENST00000432147 357 ntBASIC-0.61□□□□□ -2.51
VPS13CQ709C8 ELOCP30-201ENST00000447108 299 ntBASIC-0.61□□□□□ -2.51
VPS13CQ709C8 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC-0.61□□□□□ -2.51
VPS13CQ709C8 SCARNA3-201ENST00000517097 143 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms