Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2□□□□□ -2.09
ZNF544Q6NX49 MIR7515-201ENST00000637837 67 ntBASIC2□□□□□ -2.09
ZNF544Q6NX49 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2□□□□□ -2.09
ZNF544Q6NX49 AL359851.1-201ENST00000569460 4997 ntBASIC2□□□□□ -2.09
ZNF544Q6NX49 Y_RNA.100-201ENST00000363141 102 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 RNU6-266P-201ENST00000364225 107 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 Y_RNA.324-201ENST00000365165 102 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 RNU6-72P-201ENST00000384285 79 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 MIR10A-201ENST00000385043 110 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 RNU6-750P-201ENST00000390946 107 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 SNORA48.3-201ENST00000391081 134 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 EIF4E2P1-201ENST00000393781 255 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 RAP1BP3-201ENST00000407180 549 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 MIR1261-201ENST00000408659 82 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 RNU4-26P-201ENST00000410270 107 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 RN7SKP223-201ENST00000410582 62 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.99□□□□□ -2.09
ZNF544Q6NX49 RPL30P16-201ENST00000419341 429 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.99□□□□□ -2.09
ZNF544Q6NX49 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.99□□□□□ -2.09
ZNF544Q6NX49 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.99□□□□□ -2.09
ZNF544Q6NX49 HMGB1P31-201ENST00000437242 427 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.99□□□□□ -2.09
ZNF544Q6NX49 AL121601.2-201ENST00000438019 707 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 RNU7-66P-201ENST00000459469 62 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 RPL31P58-201ENST00000469001 379 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.99□□□□□ -2.09
ZNF544Q6NX49 FAM206BP-201ENST00000510179 541 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 RNU6-1069P-201ENST00000516612 133 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 COPS8P3-201ENST00000526024 482 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.99□□□□□ -2.09
ZNF544Q6NX49 AC026464.5-201ENST00000562497 722 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 MIR4648-201ENST00000580107 72 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 MIR3935-201ENST00000583472 104 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.99□□□□□ -2.09
ZNF544Q6NX49 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
ZNF544Q6NX49 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 AC010378.1-201ENST00000619270 362 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
ZNF544Q6NX49 AP006437.1-201ENST00000641440 3685 ntBASIC1.99□□□□□ -2.09
ZNF544Q6NX49 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.99□□□□□ -2.09
ZNF544Q6NX49 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
ZNF544Q6NX49 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
ZNF544Q6NX49 RNU6-942P-201ENST00000363002 107 ntBASIC1.98□□□□□ -2.09
ZNF544Q6NX49 RNU6-898P-201ENST00000365627 104 ntBASIC1.98□□□□□ -2.09
ZNF544Q6NX49 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
ZNF544Q6NX49 RNA5SP219-201ENST00000390940 113 ntBASIC1.98□□□□□ -2.09
ZNF544Q6NX49 RNU6-332P-201ENST00000391193 108 ntBASIC1.98□□□□□ -2.09
ZNF544Q6NX49 Y_RNA.615-201ENST00000410769 117 ntBASIC1.98□□□□□ -2.09
ZNF544Q6NX49 AL356379.1-201ENST00000414105 126 ntBASIC1.98□□□□□ -2.09
ZNF544Q6NX49 AC016831.2-201ENST00000417179 352 ntBASIC1.98□□□□□ -2.09
ZNF544Q6NX49 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.98□□□□□ -2.09
ZNF544Q6NX49 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.98□□□□□ -2.09
ZNF544Q6NX49 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
ZNF544Q6NX49 RPL23AP7-203ENST00000449021 469 ntBASIC1.98□□□□□ -2.09
ZNF544Q6NX49 AL021397.1-201ENST00000451806 248 ntBASIC1.98□□□□□ -2.09
ZNF544Q6NX49 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.98□□□□□ -2.09
ZNF544Q6NX49 BTF3P15-201ENST00000455606 336 ntBASIC1.98□□□□□ -2.09
ZNF544Q6NX49 AC087884.1-201ENST00000469738 328 ntBASIC1.98□□□□□ -2.09
ZNF544Q6NX49 YWHAEP4-201ENST00000505390 198 ntBASIC1.98□□□□□ -2.09
ZNF544Q6NX49 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.98□□□□□ -2.09
ZNF544Q6NX49 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.98□□□□□ -2.09
ZNF544Q6NX49 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.98□□□□□ -2.09
ZNF544Q6NX49 AC018638.8-201ENST00000588755 281 ntBASIC1.98□□□□□ -2.09
ZNF544Q6NX49 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.98□□□□□ -2.09
ZNF544Q6NX49 AL391813.1-201ENST00000603098 260 ntBASIC1.98□□□□□ -2.09
ZNF544Q6NX49 AC092747.3-201ENST00000603769 301 ntBASIC1.98□□□□□ -2.09
ZNF544Q6NX49 AC091152.3-201ENST00000604227 325 ntBASIC1.98□□□□□ -2.09
ZNF544Q6NX49 AC002044.1-201ENST00000606707 158 ntBASIC1.98□□□□□ -2.09
ZNF544Q6NX49 Z82243.1-201ENST00000609432 473 ntBASIC1.98□□□□□ -2.09
ZNF544Q6NX49 RMST_7.1-201ENST00000621935 268 ntBASIC1.98□□□□□ -2.09
ZNF544Q6NX49 MIR6873-201ENST00000622788 63 ntBASIC1.98□□□□□ -2.09
ZNF544Q6NX49 MIR3199-2-201ENST00000636243 86 ntBASIC1.98□□□□□ -2.09
ZNF544Q6NX49 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.98□□□□□ -2.09
ZNF544Q6NX49 KPNA2P1-201ENST00000458289 1591 ntBASIC1.98□□□□□ -2.09
ZNF544Q6NX49 CENPCP1-201ENST00000533085 2578 ntBASIC1.97□□□□□ -2.09
ZNF544Q6NX49 SNORA16B-201ENST00000364674 135 ntBASIC1.97□□□□□ -2.09
ZNF544Q6NX49 Y_RNA.530-201ENST00000384587 101 ntBASIC1.97□□□□□ -2.09
ZNF544Q6NX49 RNU2-49P-201ENST00000410666 184 ntBASIC1.97□□□□□ -2.09
ZNF544Q6NX49 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.97□□□□□ -2.09
ZNF544Q6NX49 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.97□□□□□ -2.09
ZNF544Q6NX49 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.97□□□□□ -2.09
ZNF544Q6NX49 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.97□□□□□ -2.09
ZNF544Q6NX49 GPM6BP3-201ENST00000442797 145 ntBASIC1.97□□□□□ -2.09
ZNF544Q6NX49 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.97□□□□□ -2.09
ZNF544Q6NX49 AC107626.1-201ENST00000471084 183 ntBASIC1.97□□□□□ -2.09
ZNF544Q6NX49 PRDX4P1-201ENST00000507189 574 ntBASIC1.97□□□□□ -2.09
ZNF544Q6NX49 RNU6-1038P-201ENST00000516516 104 ntBASIC1.97□□□□□ -2.09
ZNF544Q6NX49 AC069113.1-201ENST00000517763 267 ntBASIC1.97□□□□□ -2.09
ZNF544Q6NX49 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.97□□□□□ -2.09
ZNF544Q6NX49 IGKV3-31-201ENST00000523109 329 ntBASIC1.97□□□□□ -2.09
ZNF544Q6NX49 AP004607.1-201ENST00000524456 203 ntBASIC1.97□□□□□ -2.09
ZNF544Q6NX49 AC118273.2-201ENST00000532092 465 ntBASIC1.97□□□□□ -2.09
ZNF544Q6NX49 AC023050.3-201ENST00000541142 333 ntBASIC1.97□□□□□ -2.09
ZNF544Q6NX49 PSMA3P-201ENST00000555485 635 ntBASIC1.97□□□□□ -2.09
ZNF544Q6NX49 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.97□□□□□ -2.09
ZNF544Q6NX49 AC104984.5-201ENST00000586878 94 ntBASIC1.97□□□□□ -2.09
ZNF544Q6NX49 AC021646.1-201ENST00000605469 484 ntBASIC1.97□□□□□ -2.09
ZNF544Q6NX49 FAM157A-202ENST00000615155 405 ntBASIC1.97□□□□□ -2.09
ZNF544Q6NX49 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms