Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 SCARNA1-201ENST00000517138 166 ntBASIC1.22□□□□□ -2.21
ZNF404Q494X3 COPS8P3-201ENST00000526024 482 ntBASIC1.22□□□□□ -2.21
ZNF404Q494X3 AC022878.1-201ENST00000530684 149 ntBASIC1.22□□□□□ -2.21
ZNF404Q494X3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.22□□□□□ -2.21
ZNF404Q494X3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.22□□□□□ -2.21
ZNF404Q494X3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.22□□□□□ -2.21
ZNF404Q494X3 TMF1P1-201ENST00000576058 373 ntBASIC1.22□□□□□ -2.21
ZNF404Q494X3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.22□□□□□ -2.21
ZNF404Q494X3 AL121992.2-201ENST00000606262 256 ntBASIC1.22□□□□□ -2.21
ZNF404Q494X3 MIR7844-201ENST00000616161 122 ntBASIC1.22□□□□□ -2.21
ZNF404Q494X3 AL590240.4-201ENST00000616908 390 ntBASIC1.22□□□□□ -2.21
ZNF404Q494X3 AC099654.13-201ENST00000639774 207 ntBASIC1.22□□□□□ -2.21
ZNF404Q494X3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.21□□□□□ -2.22
ZNF404Q494X3 MIR378A-201ENST00000362177 66 ntBASIC1.21□□□□□ -2.22
ZNF404Q494X3 RNA5SP493-201ENST00000364115 91 ntBASIC1.21□□□□□ -2.22
ZNF404Q494X3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.21□□□□□ -2.22
ZNF404Q494X3 RNU6-338P-201ENST00000383888 105 ntBASIC1.21□□□□□ -2.22
ZNF404Q494X3 SNORA20.2-201ENST00000383922 131 ntBASIC1.21□□□□□ -2.22
ZNF404Q494X3 RNU6-439P-201ENST00000384188 106 ntBASIC1.21□□□□□ -2.22
ZNF404Q494X3 RNU2-8P-201ENST00000410727 190 ntBASIC1.21□□□□□ -2.22
ZNF404Q494X3 NCOR1P3-201ENST00000420479 303 ntBASIC1.21□□□□□ -2.22
ZNF404Q494X3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.21□□□□□ -2.22
ZNF404Q494X3 AL356583.2-201ENST00000426536 280 ntBASIC1.21□□□□□ -2.22
ZNF404Q494X3 SDAD1P3-201ENST00000427380 333 ntBASIC1.21□□□□□ -2.22
ZNF404Q494X3 AL603825.1-201ENST00000438481 80 ntBASIC1.21□□□□□ -2.22
ZNF404Q494X3 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.21□□□□□ -2.22
ZNF404Q494X3 Z73417.1-201ENST00000447373 778 ntBASIC1.21□□□□□ -2.22
ZNF404Q494X3 RN7SKP179-201ENST00000516126 217 ntBASIC1.21□□□□□ -2.22
ZNF404Q494X3 RNU6-1220P-201ENST00000517126 108 ntBASIC1.21□□□□□ -2.22
ZNF404Q494X3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.21□□□□□ -2.22
ZNF404Q494X3 AC115990.1-201ENST00000526957 301 ntBASIC1.21□□□□□ -2.22
ZNF404Q494X3 AL161670.1-201ENST00000554348 137 ntBASIC1.21□□□□□ -2.22
ZNF404Q494X3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.21□□□□□ -2.22
ZNF404Q494X3 AC002400.1-201ENST00000569310 726 ntBASIC1.21□□□□□ -2.22
ZNF404Q494X3 MIR3169-201ENST00000578032 83 ntBASIC1.21□□□□□ -2.22
ZNF404Q494X3 VN1R80P-201ENST00000597126 338 ntBASIC1.21□□□□□ -2.22
ZNF404Q494X3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.21□□□□□ -2.22
ZNF404Q494X3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.21□□□□□ -2.22
ZNF404Q494X3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.21□□□□□ -2.22
ZNF404Q494X3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.2□□□□□ -2.22
ZNF404Q494X3 ZNF209P-201ENST00000593450 2304 ntBASIC1.2□□□□□ -2.22
ZNF404Q494X3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
ZNF404Q494X3 Y_RNA.576-201ENST00000384781 102 ntBASIC1.2□□□□□ -2.22
ZNF404Q494X3 RNU2-3P-201ENST00000410144 191 ntBASIC1.2□□□□□ -2.22
ZNF404Q494X3 RNU6-607P-201ENST00000411283 108 ntBASIC1.2□□□□□ -2.22
ZNF404Q494X3 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.2□□□□□ -2.22
ZNF404Q494X3 BTF3P4-201ENST00000418852 495 ntBASIC1.2□□□□□ -2.22
ZNF404Q494X3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.2□□□□□ -2.22
ZNF404Q494X3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.2□□□□□ -2.22
ZNF404Q494X3 ZNF114P1-201ENST00000453500 292 ntBASIC1.2□□□□□ -2.22
ZNF404Q494X3 AC112492.4-201ENST00000456549 352 ntBASIC1.2□□□□□ -2.22
ZNF404Q494X3 RN7SKP210-201ENST00000459176 261 ntBASIC1.2□□□□□ -2.22
ZNF404Q494X3 SNORD11.1-201ENST00000459482 85 ntBASIC1.2□□□□□ -2.22
ZNF404Q494X3 AC116562.3-201ENST00000506136 177 ntBASIC1.2□□□□□ -2.22
ZNF404Q494X3 SCARNA24.1-201ENST00000516465 137 ntBASIC1.2□□□□□ -2.22
ZNF404Q494X3 RNA5SP490-201ENST00000517141 136 ntBASIC1.2□□□□□ -2.22
ZNF404Q494X3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.2□□□□□ -2.22
ZNF404Q494X3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.2□□□□□ -2.22
ZNF404Q494X3 AP001893.2-201ENST00000526949 202 ntBASIC1.2□□□□□ -2.22
ZNF404Q494X3 AC068587.5-201ENST00000528506 175 ntBASIC1.2□□□□□ -2.22
ZNF404Q494X3 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
ZNF404Q494X3 TRAV32-201ENST00000553993 340 ntBASIC1.2□□□□□ -2.22
ZNF404Q494X3 RPL21P5-201ENST00000554662 472 ntBASIC1.2□□□□□ -2.22
ZNF404Q494X3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.2□□□□□ -2.22
ZNF404Q494X3 AL034555.1-201ENST00000604816 211 ntBASIC1.2□□□□□ -2.22
ZNF404Q494X3 AL161722.3-201ENST00000605789 2983 ntBASIC1.2□□□□□ -2.22
ZNF404Q494X3 AC138649.3-201ENST00000622154 254 ntBASIC1.2□□□□□ -2.22
ZNF404Q494X3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
ZNF404Q494X3 RNU6-1214P-201ENST00000363650 109 ntBASIC1.19□□□□□ -2.22
ZNF404Q494X3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
ZNF404Q494X3 RNU6-116P-201ENST00000384042 109 ntBASIC1.19□□□□□ -2.22
ZNF404Q494X3 SNORA12-201ENST00000391162 147 ntBASIC1.19□□□□□ -2.22
ZNF404Q494X3 RNU2-41P-201ENST00000410991 178 ntBASIC1.19□□□□□ -2.22
ZNF404Q494X3 RNU6-1245P-201ENST00000411130 106 ntBASIC1.19□□□□□ -2.22
ZNF404Q494X3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.19□□□□□ -2.22
ZNF404Q494X3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.19□□□□□ -2.22
ZNF404Q494X3 AP1B1P2-201ENST00000416196 106 ntBASIC1.19□□□□□ -2.22
ZNF404Q494X3 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.19□□□□□ -2.22
ZNF404Q494X3 MTATP6P16-201ENST00000434543 526 ntBASIC1.19□□□□□ -2.22
ZNF404Q494X3 EPS15P1-201ENST00000448836 336 ntBASIC1.19□□□□□ -2.22
ZNF404Q494X3 RNU6-333P-201ENST00000459117 107 ntBASIC1.19□□□□□ -2.22
ZNF404Q494X3 RNU7-95P-201ENST00000459222 64 ntBASIC1.19□□□□□ -2.22
ZNF404Q494X3 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.19□□□□□ -2.22
ZNF404Q494X3 MIR449C-201ENST00000516047 92 ntBASIC1.19□□□□□ -2.22
ZNF404Q494X3 SNORA31.17-201ENST00000516953 127 ntBASIC1.19□□□□□ -2.22
ZNF404Q494X3 RNU1-92P-201ENST00000517017 135 ntBASIC1.19□□□□□ -2.22
ZNF404Q494X3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.19□□□□□ -2.22
ZNF404Q494X3 AC005771.1-201ENST00000585581 349 ntBASIC1.19□□□□□ -2.22
ZNF404Q494X3 AC018889.1-201ENST00000605372 397 ntBASIC1.19□□□□□ -2.22
ZNF404Q494X3 AC009159.2-201ENST00000617603 606 ntBASIC1.19□□□□□ -2.22
ZNF404Q494X3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.19□□□□□ -2.22
ZNF404Q494X3 Z69720.2-201ENST00000624755 279 ntBASIC1.19□□□□□ -2.22
ZNF404Q494X3 AC008993.2-201ENST00000631744 806 ntBASIC1.19□□□□□ -2.22
ZNF404Q494X3 U4.7-201ENST00000638126 106 ntBASIC1.19□□□□□ -2.22
ZNF404Q494X3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.18□□□□□ -2.22
ZNF404Q494X3 LINC02555-201ENST00000563933 1951 ntBASIC1.18□□□□□ -2.22
ZNF404Q494X3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
ZNF404Q494X3 RNU6-105P-201ENST00000363909 104 ntBASIC1.18□□□□□ -2.22
ZNF404Q494X3 SNORD114-6-201ENST00000364393 72 ntBASIC1.18□□□□□ -2.22
ZNF404Q494X3 SNORD32B-201ENST00000364460 84 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms