Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 MIR320C1-201ENST00000408566 88 ntBASIC0.65□□□□□ -2.31
RFX7Q2KHR2 Y_RNA.597-201ENST00000410463 100 ntBASIC0.65□□□□□ -2.31
RFX7Q2KHR2 AL359704.1-201ENST00000411586 781 ntBASIC0.65□□□□□ -2.31
RFX7Q2KHR2 AC016831.2-201ENST00000417179 352 ntBASIC0.65□□□□□ -2.31
RFX7Q2KHR2 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.65□□□□□ -2.31
RFX7Q2KHR2 RSL24D1P8-201ENST00000434442 492 ntBASIC0.65□□□□□ -2.31
RFX7Q2KHR2 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.65□□□□□ -2.31
RFX7Q2KHR2 HSPE1P13-201ENST00000451143 297 ntBASIC0.65□□□□□ -2.31
RFX7Q2KHR2 AC003071.1-201ENST00000451219 789 ntBASIC0.65□□□□□ -2.31
RFX7Q2KHR2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.65□□□□□ -2.31
RFX7Q2KHR2 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
RFX7Q2KHR2 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.65□□□□□ -2.31
RFX7Q2KHR2 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.65□□□□□ -2.31
RFX7Q2KHR2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.65□□□□□ -2.31
RFX7Q2KHR2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.65□□□□□ -2.31
RFX7Q2KHR2 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.65□□□□□ -2.31
RFX7Q2KHR2 HMGB1P33-201ENST00000563485 527 ntBASIC0.65□□□□□ -2.31
RFX7Q2KHR2 MIR3169-201ENST00000578032 83 ntBASIC0.65□□□□□ -2.31
RFX7Q2KHR2 AC063943.3-201ENST00000615562 356 ntBASIC0.65□□□□□ -2.31
RFX7Q2KHR2 AC018926.1-201ENST00000616335 435 ntBASIC0.65□□□□□ -2.31
RFX7Q2KHR2 AC022513.1-201ENST00000624512 117 ntBASIC0.65□□□□□ -2.31
RFX7Q2KHR2 RNU6-112P-201ENST00000363599 104 ntBASIC0.64□□□□□ -2.31
RFX7Q2KHR2 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.64□□□□□ -2.31
RFX7Q2KHR2 RNU6-360P-201ENST00000390944 104 ntBASIC0.64□□□□□ -2.31
RFX7Q2KHR2 RNU2-23P-201ENST00000410545 195 ntBASIC0.64□□□□□ -2.31
RFX7Q2KHR2 RNU2-7P-201ENST00000410794 178 ntBASIC0.64□□□□□ -2.31
RFX7Q2KHR2 MTCO1P17-201ENST00000411522 491 ntBASIC0.64□□□□□ -2.31
RFX7Q2KHR2 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.64□□□□□ -2.31
RFX7Q2KHR2 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.64□□□□□ -2.31
RFX7Q2KHR2 AL591043.1-201ENST00000432461 424 ntBASIC0.64□□□□□ -2.31
RFX7Q2KHR2 UBE2V1P8-201ENST00000437166 265 ntBASIC0.64□□□□□ -2.31
RFX7Q2KHR2 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.64□□□□□ -2.31
RFX7Q2KHR2 AL606517.1-201ENST00000446914 387 ntBASIC0.64□□□□□ -2.31
RFX7Q2KHR2 AC132479.1-201ENST00000449160 144 ntBASIC0.64□□□□□ -2.31
RFX7Q2KHR2 HMGN2P9-201ENST00000476875 229 ntBASIC0.64□□□□□ -2.31
RFX7Q2KHR2 RPL26P26-201ENST00000480251 434 ntBASIC0.64□□□□□ -2.31
RFX7Q2KHR2 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.64□□□□□ -2.31
RFX7Q2KHR2 ACA64.5-201ENST00000516207 127 ntBASIC0.64□□□□□ -2.31
RFX7Q2KHR2 CYCSP23-201ENST00000519781 313 ntBASIC0.64□□□□□ -2.31
RFX7Q2KHR2 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.64□□□□□ -2.31
RFX7Q2KHR2 AC092325.1-201ENST00000566449 554 ntBASIC0.64□□□□□ -2.31
RFX7Q2KHR2 AC025678.1-201ENST00000567861 338 ntBASIC0.64□□□□□ -2.31
RFX7Q2KHR2 AC136618.2-201ENST00000575091 400 ntBASIC0.64□□□□□ -2.31
RFX7Q2KHR2 MIR5094-201ENST00000578766 85 ntBASIC0.64□□□□□ -2.31
RFX7Q2KHR2 AC007792.1-201ENST00000623023 402 ntBASIC0.64□□□□□ -2.31
RFX7Q2KHR2 AC120349.3-201ENST00000624377 529 ntBASIC0.64□□□□□ -2.31
RFX7Q2KHR2 MIR1248-201ENST00000629190 106 ntBASIC0.64□□□□□ -2.31
RFX7Q2KHR2 AC006927.2-201ENST00000639256 389 ntBASIC0.64□□□□□ -2.31
RFX7Q2KHR2 Y_RNA.408-201ENST00000383987 102 ntBASIC0.63□□□□□ -2.31
RFX7Q2KHR2 MIR100-201ENST00000385259 80 ntBASIC0.63□□□□□ -2.31
RFX7Q2KHR2 MRPL35P1-201ENST00000404272 572 ntBASIC0.63□□□□□ -2.31
RFX7Q2KHR2 AL357139.1-201ENST00000407792 426 ntBASIC0.63□□□□□ -2.31
RFX7Q2KHR2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.63□□□□□ -2.31
RFX7Q2KHR2 AC083875.1-201ENST00000419509 405 ntBASIC0.63□□□□□ -2.31
RFX7Q2KHR2 AL953862.1-201ENST00000423016 168 ntBASIC0.63□□□□□ -2.31
RFX7Q2KHR2 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.63□□□□□ -2.31
RFX7Q2KHR2 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.63□□□□□ -2.31
RFX7Q2KHR2 ZNF886P-201ENST00000450781 723 ntBASIC0.63□□□□□ -2.31
RFX7Q2KHR2 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.63□□□□□ -2.31
RFX7Q2KHR2 AC130509.1-201ENST00000464158 433 ntBASIC0.63□□□□□ -2.31
RFX7Q2KHR2 AC145146.1-201ENST00000496370 254 ntBASIC0.63□□□□□ -2.31
RFX7Q2KHR2 PSMC1P5-201ENST00000512850 177 ntBASIC0.63□□□□□ -2.31
RFX7Q2KHR2 AC027338.1-201ENST00000514840 825 ntBASIC0.63□□□□□ -2.31
RFX7Q2KHR2 RNU6-1315P-201ENST00000517187 99 ntBASIC0.63□□□□□ -2.31
RFX7Q2KHR2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.63□□□□□ -2.31
RFX7Q2KHR2 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.63□□□□□ -2.31
RFX7Q2KHR2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.63□□□□□ -2.31
RFX7Q2KHR2 CYP3A52P-201ENST00000563326 91 ntBASIC0.63□□□□□ -2.31
RFX7Q2KHR2 MIR4293-201ENST00000584305 78 ntBASIC0.63□□□□□ -2.31
RFX7Q2KHR2 AL360085.1-201ENST00000604713 532 ntBASIC0.63□□□□□ -2.31
RFX7Q2KHR2 AP000654.2-201ENST00000605633 586 ntBASIC0.63□□□□□ -2.31
RFX7Q2KHR2 AC099785.1-201ENST00000605697 437 ntBASIC0.63□□□□□ -2.31
RFX7Q2KHR2 AC027335.2-201ENST00000624030 375 ntBASIC0.63□□□□□ -2.31
RFX7Q2KHR2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.63□□□□□ -2.31
RFX7Q2KHR2 Y_RNA.33-201ENST00000362591 102 ntBASIC0.62□□□□□ -2.31
RFX7Q2KHR2 snoZ40.1-201ENST00000364540 72 ntBASIC0.62□□□□□ -2.31
RFX7Q2KHR2 Y_RNA.255-201ENST00000364581 97 ntBASIC0.62□□□□□ -2.31
RFX7Q2KHR2 Y_RNA.578-201ENST00000390903 88 ntBASIC0.62□□□□□ -2.31
RFX7Q2KHR2 RPL23AP32-201ENST00000395315 459 ntBASIC0.62□□□□□ -2.31
RFX7Q2KHR2 RNU6-733P-201ENST00000410759 104 ntBASIC0.62□□□□□ -2.31
RFX7Q2KHR2 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.62□□□□□ -2.31
RFX7Q2KHR2 AL161935.2-201ENST00000414627 60 ntBASIC0.62□□□□□ -2.31
RFX7Q2KHR2 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.62□□□□□ -2.31
RFX7Q2KHR2 MTCO2P1-201ENST00000424648 477 ntBASIC0.62□□□□□ -2.31
RFX7Q2KHR2 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
RFX7Q2KHR2 AC013262.1-201ENST00000426710 252 ntBASIC0.62□□□□□ -2.31
RFX7Q2KHR2 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.62□□□□□ -2.31
RFX7Q2KHR2 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.62□□□□□ -2.31
RFX7Q2KHR2 RPS20P10-201ENST00000451209 253 ntBASIC0.62□□□□□ -2.31
RFX7Q2KHR2 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
RFX7Q2KHR2 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.62□□□□□ -2.31
RFX7Q2KHR2 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
RFX7Q2KHR2 DEFB108A-201ENST00000530110 222 ntBASIC0.62□□□□□ -2.31
RFX7Q2KHR2 AL356057.1-201ENST00000533798 831 ntBASIC0.62□□□□□ -2.31
RFX7Q2KHR2 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.62□□□□□ -2.31
RFX7Q2KHR2 AC087897.1-201ENST00000550134 156 ntBASIC0.62□□□□□ -2.31
RFX7Q2KHR2 MTCYBP33-201ENST00000575007 1130 ntBASIC0.62□□□□□ -2.31
RFX7Q2KHR2 MIR1273C-201ENST00000578669 77 ntBASIC0.62□□□□□ -2.31
RFX7Q2KHR2 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.62□□□□□ -2.31
RFX7Q2KHR2 AL358072.1-201ENST00000604156 575 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms