Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.42□□□□□ -1.86
SF3B3Q15393 AC013412.1-201ENST00000610687 192 ntBASIC3.42□□□□□ -1.86
SF3B3Q15393 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.42□□□□□ -1.86
SF3B3Q15393 AC138627.2-201ENST00000624202 601 ntBASIC3.42□□□□□ -1.86
SF3B3Q15393 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
SF3B3Q15393 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
SF3B3Q15393 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SF3B3Q15393 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SF3B3Q15393 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SF3B3Q15393 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SF3B3Q15393 RNU6-799P-201ENST00000363567 107 ntBASIC3.41□□□□□ -1.86
SF3B3Q15393 RNU6-1027P-201ENST00000383998 107 ntBASIC3.41□□□□□ -1.86
SF3B3Q15393 Y_RNA.645-201ENST00000391229 102 ntBASIC3.41□□□□□ -1.86
SF3B3Q15393 HMGB3P2-201ENST00000411913 584 ntBASIC3.41□□□□□ -1.86
SF3B3Q15393 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.41□□□□□ -1.86
SF3B3Q15393 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.41□□□□□ -1.86
SF3B3Q15393 ARL5AP4-201ENST00000430731 512 ntBASIC3.41□□□□□ -1.86
SF3B3Q15393 AC128713.1-201ENST00000471495 306 ntBASIC3.41□□□□□ -1.86
SF3B3Q15393 AC068781.1-201ENST00000488231 618 ntBASIC3.41□□□□□ -1.86
SF3B3Q15393 AC015911.1-201ENST00000495111 156 ntBASIC3.41□□□□□ -1.86
SF3B3Q15393 RNU6-264P-201ENST00000517134 104 ntBASIC3.41□□□□□ -1.86
SF3B3Q15393 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.41□□□□□ -1.86
SF3B3Q15393 GNAI2P1-201ENST00000541815 315 ntBASIC3.41□□□□□ -1.86
SF3B3Q15393 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.41□□□□□ -1.86
SF3B3Q15393 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.41□□□□□ -1.86
SF3B3Q15393 CPDP1-201ENST00000579660 283 ntBASIC3.41□□□□□ -1.86
SF3B3Q15393 AC092447.9-201ENST00000603395 144 ntBASIC3.41□□□□□ -1.86
SF3B3Q15393 AC104695.3-201ENST00000604052 296 ntBASIC3.41□□□□□ -1.86
SF3B3Q15393 AL121917.1-203ENST00000605534 577 ntBASIC3.41□□□□□ -1.86
SF3B3Q15393 AL121655.1-201ENST00000605811 308 ntBASIC3.41□□□□□ -1.86
SF3B3Q15393 Z69720.2-201ENST00000624755 279 ntBASIC3.41□□□□□ -1.86
SF3B3Q15393 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
SF3B3Q15393 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SF3B3Q15393 AC233263.6-201ENST00000631132 1963 ntBASIC3.4□□□□□ -1.86
SF3B3Q15393 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.4□□□□□ -1.86
SF3B3Q15393 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.4□□□□□ -1.86
SF3B3Q15393 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
SF3B3Q15393 RNA5SP68-201ENST00000363885 119 ntBASIC3.4□□□□□ -1.87
SF3B3Q15393 SNORA1.3-201ENST00000384676 136 ntBASIC3.4□□□□□ -1.87
SF3B3Q15393 Y_RNA.557-201ENST00000384680 107 ntBASIC3.4□□□□□ -1.87
SF3B3Q15393 SNORA67.4-201ENST00000384688 142 ntBASIC3.4□□□□□ -1.87
SF3B3Q15393 Y_RNA.623-201ENST00000411128 95 ntBASIC3.4□□□□□ -1.87
SF3B3Q15393 SNORD56-201ENST00000413522 71 ntBASIC3.4□□□□□ -1.87
SF3B3Q15393 MRPS18CP6-201ENST00000423587 223 ntBASIC3.4□□□□□ -1.87
SF3B3Q15393 BX276092.3-201ENST00000424182 230 ntBASIC3.4□□□□□ -1.87
SF3B3Q15393 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SF3B3Q15393 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.4□□□□□ -1.87
SF3B3Q15393 AC007919.1-201ENST00000429380 217 ntBASIC3.4□□□□□ -1.87
SF3B3Q15393 RPL23AP50-201ENST00000434149 455 ntBASIC3.4□□□□□ -1.87
SF3B3Q15393 CECR9-201ENST00000453421 199 ntBASIC3.4□□□□□ -1.87
SF3B3Q15393 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SF3B3Q15393 AL031183.1-201ENST00000457667 207 ntBASIC3.4□□□□□ -1.87
SF3B3Q15393 MTATP8P1-201ENST00000467115 207 ntBASIC3.4□□□□□ -1.87
SF3B3Q15393 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SF3B3Q15393 AC025755.1-201ENST00000521306 278 ntBASIC3.4□□□□□ -1.87
SF3B3Q15393 AC107294.3-201ENST00000609211 526 ntBASIC3.4□□□□□ -1.87
SF3B3Q15393 AC090617.7-201ENST00000623952 126 ntBASIC3.4□□□□□ -1.87
SF3B3Q15393 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.4□□□□□ -1.87
SF3B3Q15393 AC005592.1-201ENST00000566527 1640 ntBASIC3.4□□□□□ -1.87
SF3B3Q15393 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.39□□□□□ -1.87
SF3B3Q15393 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SF3B3Q15393 RNU6-37P-201ENST00000362692 107 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 RNU6-11P-201ENST00000364234 107 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SF3B3Q15393 RNU6-25P-201ENST00000383873 107 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 RNU6-1-201ENST00000383898 107 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 RNU6-48P-201ENST00000384161 107 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 RNU6-36P-201ENST00000384172 107 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 RNU6-4P-201ENST00000384205 107 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 Y_RNA.455-201ENST00000384230 98 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 RNU6-5P-201ENST00000384238 107 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 RNU6-3P-201ENST00000384314 107 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 RNU6-16P-201ENST00000384385 107 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 RNU6-790P-201ENST00000384479 105 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 RNU6-15P-201ENST00000384534 107 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 RNU6-2-201ENST00000384627 107 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 RNU6-29P-201ENST00000384637 107 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 RNU6-9-201ENST00000384776 107 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 RNU6-33P-201ENST00000384793 107 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 SNORA40C-201ENST00000391285 128 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 RN7SKP284-201ENST00000411002 343 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 AL627311.1-201ENST00000431514 115 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 AC112220.1-201ENST00000434628 355 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 AC099799.1-201ENST00000439809 192 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 RPL23AP58-201ENST00000440453 469 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.39□□□□□ -1.87
SF3B3Q15393 PIGFP3-201ENST00000441918 722 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.39□□□□□ -1.87
SF3B3Q15393 AL583843.1-201ENST00000456070 346 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 AC090525.1-201ENST00000479116 478 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 AC022447.4-201ENST00000504053 364 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.39□□□□□ -1.87
SF3B3Q15393 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.39□□□□□ -1.87
SF3B3Q15393 RNU4-77P-201ENST00000516692 156 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 TRAV28-201ENST00000557548 323 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 AC008269.2-201ENST00000561915 1105 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 AC113195.1-201ENST00000579952 141 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 AP000787.2-201ENST00000604432 568 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 RNU6-6P-201ENST00000606623 107 ntBASIC3.39□□□□□ -1.87
SF3B3Q15393 AL138880.2-201ENST00000616214 239 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms