Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 Y_RNA.597-201ENST00000410463 100 ntBASIC1.78□□□□□ -2.12
RAB40BQ12829 AL117339.3-201ENST00000418733 162 ntBASIC1.78□□□□□ -2.12
RAB40BQ12829 AL353193.1-201ENST00000421444 268 ntBASIC1.78□□□□□ -2.12
RAB40BQ12829 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.78□□□□□ -2.12
RAB40BQ12829 AL356320.1-201ENST00000429616 163 ntBASIC1.78□□□□□ -2.12
RAB40BQ12829 TPT1P7-201ENST00000458300 517 ntBASIC1.78□□□□□ -2.12
RAB40BQ12829 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.78□□□□□ -2.12
RAB40BQ12829 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.78□□□□□ -2.12
RAB40BQ12829 AL163973.1-201ENST00000484753 577 ntBASIC1.78□□□□□ -2.12
RAB40BQ12829 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
RAB40BQ12829 RNU5F-2P-201ENST00000516066 82 ntBASIC1.78□□□□□ -2.12
RAB40BQ12829 IGKV3-31-201ENST00000523109 329 ntBASIC1.78□□□□□ -2.12
RAB40BQ12829 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.78□□□□□ -2.12
RAB40BQ12829 AC018630.3-201ENST00000542637 96 ntBASIC1.78□□□□□ -2.12
RAB40BQ12829 MIR3941-201ENST00000582572 103 ntBASIC1.78□□□□□ -2.12
RAB40BQ12829 AC012507.3-201ENST00000603556 477 ntBASIC1.78□□□□□ -2.12
RAB40BQ12829 AL132822.1-201ENST00000617063 513 ntBASIC1.78□□□□□ -2.12
RAB40BQ12829 uc_338.34-201ENST00000617467 174 ntBASIC1.78□□□□□ -2.12
RAB40BQ12829 AC064859.1-201ENST00000624741 174 ntBASIC1.78□□□□□ -2.12
RAB40BQ12829 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.78□□□□□ -2.13
RAB40BQ12829 MTND5P6-201ENST00000422338 1798 ntBASIC1.77□□□□□ -2.13
RAB40BQ12829 RNU6-1159P-201ENST00000362933 107 ntBASIC1.77□□□□□ -2.13
RAB40BQ12829 RNU6-1285P-201ENST00000363480 105 ntBASIC1.77□□□□□ -2.13
RAB40BQ12829 MIR518A2-201ENST00000384966 87 ntBASIC1.77□□□□□ -2.13
RAB40BQ12829 SNORA40.19-201ENST00000390846 128 ntBASIC1.77□□□□□ -2.13
RAB40BQ12829 RNU6-1158P-201ENST00000391167 107 ntBASIC1.77□□□□□ -2.13
RAB40BQ12829 AL606923.1-201ENST00000406616 190 ntBASIC1.77□□□□□ -2.13
RAB40BQ12829 RNU4-55P-201ENST00000410731 137 ntBASIC1.77□□□□□ -2.13
RAB40BQ12829 AL139156.1-201ENST00000412785 841 ntBASIC1.77□□□□□ -2.13
RAB40BQ12829 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.77□□□□□ -2.13
RAB40BQ12829 RPL32P28-201ENST00000443577 397 ntBASIC1.77□□□□□ -2.13
RAB40BQ12829 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.77□□□□□ -2.13
RAB40BQ12829 FDX1P2-201ENST00000450769 375 ntBASIC1.77□□□□□ -2.13
RAB40BQ12829 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.77□□□□□ -2.13
RAB40BQ12829 AC013470.1-201ENST00000453438 462 ntBASIC1.77□□□□□ -2.13
RAB40BQ12829 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.77□□□□□ -2.13
RAB40BQ12829 RNU7-180P-201ENST00000459240 63 ntBASIC1.77□□□□□ -2.13
RAB40BQ12829 AK3P2-201ENST00000507976 429 ntBASIC1.77□□□□□ -2.13
RAB40BQ12829 AC091133.4-201ENST00000511142 308 ntBASIC1.77□□□□□ -2.13
RAB40BQ12829 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.77□□□□□ -2.13
RAB40BQ12829 COPS8P3-201ENST00000526024 482 ntBASIC1.77□□□□□ -2.13
RAB40BQ12829 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.77□□□□□ -2.13
RAB40BQ12829 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.77□□□□□ -2.13
RAB40BQ12829 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.77□□□□□ -2.13
RAB40BQ12829 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.77□□□□□ -2.13
RAB40BQ12829 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.77□□□□□ -2.13
RAB40BQ12829 AC026464.5-201ENST00000562497 722 ntBASIC1.77□□□□□ -2.13
RAB40BQ12829 AC103987.3-201ENST00000582071 292 ntBASIC1.77□□□□□ -2.13
RAB40BQ12829 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.77□□□□□ -2.13
RAB40BQ12829 YWHAEP7-203ENST00000622054 312 ntBASIC1.77□□□□□ -2.13
RAB40BQ12829 AC241585.2-209ENST00000638217 143 ntBASIC1.77□□□□□ -2.13
RAB40BQ12829 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
RAB40BQ12829 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
RAB40BQ12829 RNU6-743P-201ENST00000364151 106 ntBASIC1.76□□□□□ -2.13
RAB40BQ12829 RNU6-827P-201ENST00000365553 106 ntBASIC1.76□□□□□ -2.13
RAB40BQ12829 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
RAB40BQ12829 XGY1-201ENST00000381172 446 ntBASIC1.76□□□□□ -2.13
RAB40BQ12829 RNU6-43P-201ENST00000384302 107 ntBASIC1.76□□□□□ -2.13
RAB40BQ12829 SNORD116-1-201ENST00000384335 95 ntBASIC1.76□□□□□ -2.13
RAB40BQ12829 RNU6-1119P-201ENST00000384349 108 ntBASIC1.76□□□□□ -2.13
RAB40BQ12829 RNA5SP425-201ENST00000410336 112 ntBASIC1.76□□□□□ -2.13
RAB40BQ12829 IFNA20P-201ENST00000436840 528 ntBASIC1.76□□□□□ -2.13
RAB40BQ12829 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.76□□□□□ -2.13
RAB40BQ12829 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.76□□□□□ -2.13
RAB40BQ12829 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.76□□□□□ -2.13
RAB40BQ12829 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.76□□□□□ -2.13
RAB40BQ12829 PRELID3BP1-201ENST00000457142 540 ntBASIC1.76□□□□□ -2.13
RAB40BQ12829 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.76□□□□□ -2.13
RAB40BQ12829 MIR514B-201ENST00000516774 80 ntBASIC1.76□□□□□ -2.13
RAB40BQ12829 MTND4P7-201ENST00000523876 130 ntBASIC1.76□□□□□ -2.13
RAB40BQ12829 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.76□□□□□ -2.13
RAB40BQ12829 AC103996.1-201ENST00000555468 102 ntBASIC1.76□□□□□ -2.13
RAB40BQ12829 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.76□□□□□ -2.13
RAB40BQ12829 MIR4287-201ENST00000579398 78 ntBASIC1.76□□□□□ -2.13
RAB40BQ12829 MIR5089-201ENST00000580047 84 ntBASIC1.76□□□□□ -2.13
RAB40BQ12829 VN1R107P-201ENST00000601784 209 ntBASIC1.76□□□□□ -2.13
RAB40BQ12829 AL034555.1-201ENST00000604816 211 ntBASIC1.76□□□□□ -2.13
RAB40BQ12829 AL162373.1-201ENST00000620433 407 ntBASIC1.76□□□□□ -2.13
RAB40BQ12829 SNORD98-201ENST00000636377 67 ntBASIC1.76□□□□□ -2.13
RAB40BQ12829 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
RAB40BQ12829 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
RAB40BQ12829 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.75□□□□□ -2.13
RAB40BQ12829 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
RAB40BQ12829 RNU6-1141P-201ENST00000364520 107 ntBASIC1.75□□□□□ -2.13
RAB40BQ12829 Y_RNA.255-201ENST00000364581 97 ntBASIC1.75□□□□□ -2.13
RAB40BQ12829 RNA5SP126-201ENST00000365092 109 ntBASIC1.75□□□□□ -2.13
RAB40BQ12829 RNU6-1042P-201ENST00000384204 107 ntBASIC1.75□□□□□ -2.13
RAB40BQ12829 SNORD116-2-201ENST00000384274 95 ntBASIC1.75□□□□□ -2.13
RAB40BQ12829 SNORD116-6-201ENST00000384711 96 ntBASIC1.75□□□□□ -2.13
RAB40BQ12829 SNORD37.1-201ENST00000390968 65 ntBASIC1.75□□□□□ -2.13
RAB40BQ12829 BTF3L4P2-201ENST00000392798 346 ntBASIC1.75□□□□□ -2.13
RAB40BQ12829 RPS29P13-201ENST00000402041 169 ntBASIC1.75□□□□□ -2.13
RAB40BQ12829 MIR1262-201ENST00000408276 93 ntBASIC1.75□□□□□ -2.13
RAB40BQ12829 RNA5SP450-201ENST00000411206 102 ntBASIC1.75□□□□□ -2.13
RAB40BQ12829 RN7SKP192-201ENST00000411291 327 ntBASIC1.75□□□□□ -2.13
RAB40BQ12829 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.75□□□□□ -2.13
RAB40BQ12829 HMGN2P19-201ENST00000425149 265 ntBASIC1.75□□□□□ -2.13
RAB40BQ12829 AC010975.2-201ENST00000427781 588 ntBASIC1.75□□□□□ -2.13
RAB40BQ12829 CBX3P6-201ENST00000430257 527 ntBASIC1.75□□□□□ -2.13
RAB40BQ12829 VN1R108P-201ENST00000431580 830 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms