Protein–RNA interactions for Protein: Q00341

HDLBP, Vigilin, humanhuman

Known RBP Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBPQ00341 Y_RNA.459-201ENST00000384251 102 ntBASIC4.07□□□□□ -1.76
HDLBPQ00341 MIR128-1-201ENST00000384921 82 ntBASIC4.07□□□□□ -1.76
HDLBPQ00341 SNORA48.5-201ENST00000391143 135 ntBASIC4.07□□□□□ -1.76
HDLBPQ00341 RNU6-985P-201ENST00000410182 104 ntBASIC4.07□□□□□ -1.76
HDLBPQ00341 RNU6-101P-201ENST00000410323 104 ntBASIC4.07□□□□□ -1.76
HDLBPQ00341 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.07□□□□□ -1.76
HDLBPQ00341 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.07□□□□□ -1.76
HDLBPQ00341 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.07□□□□□ -1.76
HDLBPQ00341 RPS4XP22-201ENST00000480755 780 ntBASIC4.07□□□□□ -1.76
HDLBPQ00341 RPL23AP75-201ENST00000491601 451 ntBASIC4.07□□□□□ -1.76
HDLBPQ00341 RPL22P13-201ENST00000493291 347 ntBASIC4.07□□□□□ -1.76
HDLBPQ00341 RN7SL504P-201ENST00000494496 287 ntBASIC4.07□□□□□ -1.76
HDLBPQ00341 AC021146.2-201ENST00000504736 556 ntBASIC4.07□□□□□ -1.76
HDLBPQ00341 MIR2355-201ENST00000517199 87 ntBASIC4.07□□□□□ -1.76
HDLBPQ00341 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.07□□□□□ -1.76
HDLBPQ00341 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HDLBPQ00341 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.07□□□□□ -1.76
HDLBPQ00341 MIR4325-201ENST00000583049 90 ntBASIC4.07□□□□□ -1.76
HDLBPQ00341 MIR3136-201ENST00000583498 78 ntBASIC4.07□□□□□ -1.76
HDLBPQ00341 AC136443.5-201ENST00000603741 370 ntBASIC4.07□□□□□ -1.76
HDLBPQ00341 AC107294.3-201ENST00000609211 526 ntBASIC4.07□□□□□ -1.76
HDLBPQ00341 AL359198.2-201ENST00000611836 194 ntBASIC4.07□□□□□ -1.76
HDLBPQ00341 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.07□□□□□ -1.76
HDLBPQ00341 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.07□□□□□ -1.76
HDLBPQ00341 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.07□□□□□ -1.76
HDLBPQ00341 MIR4272-201ENST00000635924 64 ntBASIC4.07□□□□□ -1.76
HDLBPQ00341 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.07□□□□□ -1.76
HDLBPQ00341 AC068647.1-201ENST00000489539 2265 ntBASIC4.07□□□□□ -1.76
HDLBPQ00341 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.07□□□□□ -1.76
HDLBPQ00341 ZNF826P-207ENST00000622273 1910 ntBASIC4.07□□□□□ -1.76
HDLBPQ00341 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.07□□□□□ -1.76
HDLBPQ00341 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
HDLBPQ00341 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.06□□□□□ -1.76
HDLBPQ00341 AC103988.1-201ENST00000566382 2177 ntBASIC4.06□□□□□ -1.76
HDLBPQ00341 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
HDLBPQ00341 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.06□□□□□ -1.76
HDLBPQ00341 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
HDLBPQ00341 Y_RNA.405-201ENST00000383979 100 ntBASIC4.06□□□□□ -1.76
HDLBPQ00341 SNORA29-201ENST00000384183 140 ntBASIC4.06□□□□□ -1.76
HDLBPQ00341 Y_RNA.451-201ENST00000384200 100 ntBASIC4.06□□□□□ -1.76
HDLBPQ00341 Y_RNA.524-201ENST00000384564 100 ntBASIC4.06□□□□□ -1.76
HDLBPQ00341 Y_RNA.561-201ENST00000384694 100 ntBASIC4.06□□□□□ -1.76
HDLBPQ00341 AC009296.1-201ENST00000443146 155 ntBASIC4.06□□□□□ -1.76
HDLBPQ00341 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.06□□□□□ -1.76
HDLBPQ00341 AC112492.4-201ENST00000456549 352 ntBASIC4.06□□□□□ -1.76
HDLBPQ00341 AC093852.1-201ENST00000503587 266 ntBASIC4.06□□□□□ -1.76
HDLBPQ00341 MTND4LP22-201ENST00000508209 276 ntBASIC4.06□□□□□ -1.76
HDLBPQ00341 RNU6-764P-201ENST00000516396 105 ntBASIC4.06□□□□□ -1.76
HDLBPQ00341 MRPS36P4-201ENST00000534436 298 ntBASIC4.06□□□□□ -1.76
HDLBPQ00341 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.06□□□□□ -1.76
HDLBPQ00341 AC073657.2-201ENST00000605661 303 ntBASIC4.06□□□□□ -1.76
HDLBPQ00341 AL162373.1-201ENST00000620433 407 ntBASIC4.06□□□□□ -1.76
HDLBPQ00341 AL078596.1-201ENST00000624856 447 ntBASIC4.06□□□□□ -1.76
HDLBPQ00341 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HDLBPQ00341 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.06□□□□□ -1.76
HDLBPQ00341 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.05□□□□□ -1.76
HDLBPQ00341 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.05□□□□□ -1.76
HDLBPQ00341 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HDLBPQ00341 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.05□□□□□ -1.76
HDLBPQ00341 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HDLBPQ00341 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.05□□□□□ -1.76
HDLBPQ00341 RNU6-1285P-201ENST00000363480 105 ntBASIC4.05□□□□□ -1.76
HDLBPQ00341 RNU6-283P-201ENST00000364788 107 ntBASIC4.05□□□□□ -1.76
HDLBPQ00341 Y_RNA.455-201ENST00000384230 98 ntBASIC4.05□□□□□ -1.76
HDLBPQ00341 MIR153-2-201ENST00000385225 87 ntBASIC4.05□□□□□ -1.76
HDLBPQ00341 SNORA26.3-201ENST00000391119 136 ntBASIC4.05□□□□□ -1.76
HDLBPQ00341 AL357075.1-201ENST00000404107 726 ntBASIC4.05□□□□□ -1.76
HDLBPQ00341 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.05□□□□□ -1.76
HDLBPQ00341 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.05□□□□□ -1.76
HDLBPQ00341 AC004383.1-201ENST00000438135 289 ntBASIC4.05□□□□□ -1.76
HDLBPQ00341 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.05□□□□□ -1.76
HDLBPQ00341 AL353752.1-201ENST00000454946 260 ntBASIC4.05□□□□□ -1.76
HDLBPQ00341 S100A11P2-201ENST00000467589 312 ntBASIC4.05□□□□□ -1.76
HDLBPQ00341 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.05□□□□□ -1.76
HDLBPQ00341 AC091874.1-201ENST00000511402 339 ntBASIC4.05□□□□□ -1.76
HDLBPQ00341 RNU6-1198P-201ENST00000516904 67 ntBASIC4.05□□□□□ -1.76
HDLBPQ00341 AC022616.4-201ENST00000522985 181 ntBASIC4.05□□□□□ -1.76
HDLBPQ00341 AC110079.1-202ENST00000635213 138 ntBASIC4.05□□□□□ -1.76
HDLBPQ00341 AC110774.1-201ENST00000623567 2018 ntBASIC4.05□□□□□ -1.76
HDLBPQ00341 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HDLBPQ00341 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HDLBPQ00341 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HDLBPQ00341 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
HDLBPQ00341 RNU6-212P-201ENST00000362642 104 ntBASIC4.04□□□□□ -1.76
HDLBPQ00341 RNA5SP374-201ENST00000362939 125 ntBASIC4.04□□□□□ -1.76
HDLBPQ00341 SNORD14.1-201ENST00000365609 90 ntBASIC4.04□□□□□ -1.76
HDLBPQ00341 Y_RNA.389-201ENST00000383924 113 ntBASIC4.04□□□□□ -1.76
HDLBPQ00341 SNORA48.8-201ENST00000391324 134 ntBASIC4.04□□□□□ -1.76
HDLBPQ00341 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.04□□□□□ -1.76
HDLBPQ00341 AC002075.2-201ENST00000425207 252 ntBASIC4.04□□□□□ -1.76
HDLBPQ00341 RPL21P40-201ENST00000428586 483 ntBASIC4.04□□□□□ -1.76
HDLBPQ00341 AP001324.2-201ENST00000461163 319 ntBASIC4.04□□□□□ -1.76
HDLBPQ00341 AC087477.1-201ENST00000465747 340 ntBASIC4.04□□□□□ -1.76
HDLBPQ00341 RPL30P1-201ENST00000488676 339 ntBASIC4.04□□□□□ -1.76
HDLBPQ00341 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.04□□□□□ -1.76
HDLBPQ00341 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.04□□□□□ -1.76
HDLBPQ00341 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.04□□□□□ -1.76
HDLBPQ00341 AC006600.1-201ENST00000572529 153 ntBASIC4.04□□□□□ -1.76
HDLBPQ00341 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.04□□□□□ -1.76
HDLBPQ00341 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms