Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RNU6-1237P-201ENST00000384777 107 ntBASIC0.21□□□□□ -2.38
RPS28P62857 RNU4-22P-201ENST00000411058 166 ntBASIC0.21□□□□□ -2.38
RPS28P62857 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.21□□□□□ -2.38
RPS28P62857 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.21□□□□□ -2.38
RPS28P62857 AC108667.1-201ENST00000428618 249 ntBASIC0.21□□□□□ -2.38
RPS28P62857 FO393414.1-201ENST00000428697 1184 ntBASIC0.21□□□□□ -2.38
RPS28P62857 AL035398.1-201ENST00000430869 322 ntBASIC0.21□□□□□ -2.38
RPS28P62857 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.21□□□□□ -2.38
RPS28P62857 FABP5P4-201ENST00000437203 171 ntBASIC0.21□□□□□ -2.38
RPS28P62857 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.21□□□□□ -2.38
RPS28P62857 AC116337.1-201ENST00000509680 687 ntBASIC0.21□□□□□ -2.38
RPS28P62857 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.21□□□□□ -2.38
RPS28P62857 MTND2P7-201ENST00000521337 640 ntBASIC0.21□□□□□ -2.38
RPS28P62857 AP000907.2-201ENST00000530827 353 ntBASIC0.21□□□□□ -2.38
RPS28P62857 AC007834.2-201ENST00000536310 343 ntBASIC0.21□□□□□ -2.38
RPS28P62857 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.21□□□□□ -2.38
RPS28P62857 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.21□□□□□ -2.38
RPS28P62857 AC008147.4-201ENST00000617570 1204 ntBASIC0.21□□□□□ -2.38
RPS28P62857 SNORA72.2-201ENST00000365028 127 ntBASIC0.2□□□□□ -2.38
RPS28P62857 Y_RNA.363-201ENST00000365529 113 ntBASIC0.2□□□□□ -2.38
RPS28P62857 SNORA50A-201ENST00000384225 134 ntBASIC0.2□□□□□ -2.38
RPS28P62857 U8.10-201ENST00000384260 133 ntBASIC0.2□□□□□ -2.38
RPS28P62857 SNORA12.2-201ENST00000391040 156 ntBASIC0.2□□□□□ -2.38
RPS28P62857 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.2□□□□□ -2.38
RPS28P62857 RPL23AP95-201ENST00000426806 265 ntBASIC0.2□□□□□ -2.38
RPS28P62857 AC004941.2-201ENST00000427009 228 ntBASIC0.2□□□□□ -2.38
RPS28P62857 MTCO2P12-201ENST00000427426 682 ntBASIC0.2□□□□□ -2.38
RPS28P62857 RPEP5-201ENST00000441137 268 ntBASIC0.2□□□□□ -2.38
RPS28P62857 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.2□□□□□ -2.38
RPS28P62857 NDUFB1P2-201ENST00000449477 176 ntBASIC0.2□□□□□ -2.38
RPS28P62857 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
RPS28P62857 AL162395.1-201ENST00000457882 422 ntBASIC0.2□□□□□ -2.38
RPS28P62857 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.2□□□□□ -2.38
RPS28P62857 AL163540.1-201ENST00000485382 386 ntBASIC0.2□□□□□ -2.38
RPS28P62857 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.2□□□□□ -2.38
RPS28P62857 AC005840.1-201ENST00000498412 377 ntBASIC0.2□□□□□ -2.38
RPS28P62857 AC119751.4-201ENST00000507498 357 ntBASIC0.2□□□□□ -2.38
RPS28P62857 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
RPS28P62857 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.2□□□□□ -2.38
RPS28P62857 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC0.2□□□□□ -2.38
RPS28P62857 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.2□□□□□ -2.38
RPS28P62857 AC110760.3-201ENST00000598794 467 ntBASIC0.2□□□□□ -2.38
RPS28P62857 DLEU1_1.1-201ENST00000618107 190 ntBASIC0.2□□□□□ -2.38
RPS28P62857 U3.8-201ENST00000363675 217 ntBASIC0.19□□□□□ -2.38
RPS28P62857 RNU6-534P-201ENST00000364877 106 ntBASIC0.19□□□□□ -2.38
RPS28P62857 SMIM11P1-201ENST00000369586 178 ntBASIC0.19□□□□□ -2.38
RPS28P62857 MIR320C1-201ENST00000408566 88 ntBASIC0.19□□□□□ -2.38
RPS28P62857 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC0.19□□□□□ -2.38
RPS28P62857 AC114737.2-201ENST00000421583 173 ntBASIC0.19□□□□□ -2.38
RPS28P62857 MTND4P20-201ENST00000424125 869 ntBASIC0.19□□□□□ -2.38
RPS28P62857 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.19□□□□□ -2.38
RPS28P62857 AL606662.1-201ENST00000445763 553 ntBASIC0.19□□□□□ -2.38
RPS28P62857 AC007395.1-201ENST00000451333 677 ntBASIC0.19□□□□□ -2.38
RPS28P62857 AC233266.1-201ENST00000454518 96 ntBASIC0.19□□□□□ -2.38
RPS28P62857 AC010531.2-201ENST00000465012 153 ntBASIC0.19□□□□□ -2.38
RPS28P62857 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.19□□□□□ -2.38
RPS28P62857 HMGN1P12-201ENST00000499125 195 ntBASIC0.19□□□□□ -2.38
RPS28P62857 AC034244.1-201ENST00000507687 207 ntBASIC0.19□□□□□ -2.38
RPS28P62857 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC0.19□□□□□ -2.38
RPS28P62857 MTND3P5-201ENST00000512798 333 ntBASIC0.19□□□□□ -2.38
RPS28P62857 AP003355.1-201ENST00000518956 587 ntBASIC0.19□□□□□ -2.38
RPS28P62857 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.19□□□□□ -2.38
RPS28P62857 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.19□□□□□ -2.38
RPS28P62857 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
RPS28P62857 AL022154.1-201ENST00000604698 785 ntBASIC0.19□□□□□ -2.38
RPS28P62857 AL360219.1-201ENST00000610230 366 ntBASIC0.19□□□□□ -2.38
RPS28P62857 AC242852.1-201ENST00000612151 96 ntBASIC0.19□□□□□ -2.38
RPS28P62857 U6.42-201ENST00000618440 107 ntBASIC0.19□□□□□ -2.38
RPS28P62857 AC244015.1-201ENST00000622301 99 ntBASIC0.19□□□□□ -2.38
RPS28P62857 FRG1KP-201ENST00000623592 341 ntBASIC0.19□□□□□ -2.38
RPS28P62857 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
RPS28P62857 RNU6-1026P-201ENST00000384465 108 ntBASIC0.18□□□□□ -2.38
RPS28P62857 MIR544A-201ENST00000384855 91 ntBASIC0.18□□□□□ -2.38
RPS28P62857 UBE2V1P2-201ENST00000397758 440 ntBASIC0.18□□□□□ -2.38
RPS28P62857 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.18□□□□□ -2.38
RPS28P62857 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.18□□□□□ -2.38
RPS28P62857 MTCYBP42-201ENST00000444653 1130 ntBASIC0.18□□□□□ -2.38
RPS28P62857 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.18□□□□□ -2.38
RPS28P62857 RPS29P21-201ENST00000496272 170 ntBASIC0.18□□□□□ -2.38
RPS28P62857 AC113410.1-201ENST00000505029 247 ntBASIC0.18□□□□□ -2.38
RPS28P62857 AC091435.1-201ENST00000505442 584 ntBASIC0.18□□□□□ -2.38
RPS28P62857 AC022493.2-201ENST00000506122 481 ntBASIC0.18□□□□□ -2.38
RPS28P62857 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.18□□□□□ -2.38
RPS28P62857 AC112206.3-201ENST00000514578 389 ntBASIC0.18□□□□□ -2.38
RPS28P62857 SNORA31.16-201ENST00000516773 139 ntBASIC0.18□□□□□ -2.38
RPS28P62857 HSPE1P4-201ENST00000550617 308 ntBASIC0.18□□□□□ -2.38
RPS28P62857 AC021231.3-201ENST00000558497 370 ntBASIC0.18□□□□□ -2.38
RPS28P62857 AC109446.1-201ENST00000566172 220 ntBASIC0.18□□□□□ -2.38
RPS28P62857 AC133485.1-201ENST00000567176 124 ntBASIC0.18□□□□□ -2.38
RPS28P62857 AC138907.6-201ENST00000568401 126 ntBASIC0.18□□□□□ -2.38
RPS28P62857 AL513534.2-201ENST00000603836 250 ntBASIC0.18□□□□□ -2.38
RPS28P62857 AC078880.5-201ENST00000617845 421 ntBASIC0.18□□□□□ -2.38
RPS28P62857 SNORD98-201ENST00000636377 67 ntBASIC0.18□□□□□ -2.38
RPS28P62857 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.17□□□□□ -2.38
RPS28P62857 SNORD31B-201ENST00000364977 69 ntBASIC0.17□□□□□ -2.38
RPS28P62857 RNU6-950P-201ENST00000384651 107 ntBASIC0.17□□□□□ -2.38
RPS28P62857 MIR508-201ENST00000384857 115 ntBASIC0.17□□□□□ -2.38
RPS28P62857 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.17□□□□□ -2.38
RPS28P62857 AC073614.1-201ENST00000438690 650 ntBASIC0.17□□□□□ -2.38
RPS28P62857 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms