Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC091179.1-201ENST00000461606 579 ntBASIC2.31□□□□□ -2.04
LMO4P61968 RPS27P29-201ENST00000463110 252 ntBASIC2.31□□□□□ -2.04
LMO4P61968 AC128713.1-201ENST00000471495 306 ntBASIC2.31□□□□□ -2.04
LMO4P61968 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.31□□□□□ -2.04
LMO4P61968 HMGB1P30-201ENST00000492455 606 ntBASIC2.31□□□□□ -2.04
LMO4P61968 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.31□□□□□ -2.04
LMO4P61968 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.31□□□□□ -2.04
LMO4P61968 AC008716.1-201ENST00000511084 513 ntBASIC2.31□□□□□ -2.04
LMO4P61968 SNORD116.3-201ENST00000517176 78 ntBASIC2.31□□□□□ -2.04
LMO4P61968 RNU6-1315P-201ENST00000517187 99 ntBASIC2.31□□□□□ -2.04
LMO4P61968 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.31□□□□□ -2.04
LMO4P61968 AC004817.2-201ENST00000561794 651 ntBASIC2.31□□□□□ -2.04
LMO4P61968 AC113195.1-201ENST00000579952 141 ntBASIC2.31□□□□□ -2.04
LMO4P61968 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.31□□□□□ -2.04
LMO4P61968 MIR4298-201ENST00000584380 73 ntBASIC2.31□□□□□ -2.04
LMO4P61968 HMGN2P15-201ENST00000585707 270 ntBASIC2.31□□□□□ -2.04
LMO4P61968 OR1M4P-201ENST00000589199 287 ntBASIC2.31□□□□□ -2.04
LMO4P61968 AC008739.2-201ENST00000597006 317 ntBASIC2.31□□□□□ -2.04
LMO4P61968 7SK.7-201ENST00000603504 247 ntBASIC2.31□□□□□ -2.04
LMO4P61968 AL355877.2-201ENST00000603670 358 ntBASIC2.31□□□□□ -2.04
LMO4P61968 AC104695.3-201ENST00000604052 296 ntBASIC2.31□□□□□ -2.04
LMO4P61968 AL161798.1-201ENST00000604630 131 ntBASIC2.31□□□□□ -2.04
LMO4P61968 MTND4LP5-201ENST00000605152 292 ntBASIC2.31□□□□□ -2.04
LMO4P61968 AC004805.2-201ENST00000605382 482 ntBASIC2.31□□□□□ -2.04
LMO4P61968 AC123912.5-201ENST00000605470 343 ntBASIC2.31□□□□□ -2.04
LMO4P61968 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
LMO4P61968 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
LMO4P61968 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LMO4P61968 AL359693.1-201ENST00000614959 2407 ntBASIC2.31□□□□□ -2.04
LMO4P61968 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
LMO4P61968 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
LMO4P61968 AC092593.1-201ENST00000515413 1815 ntBASIC2.31□□□□□ -2.04
LMO4P61968 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
LMO4P61968 Y_RNA.47-201ENST00000362697 108 ntBASIC2.3□□□□□ -2.04
LMO4P61968 Y_RNA.149-201ENST00000363558 117 ntBASIC2.3□□□□□ -2.04
LMO4P61968 Y_RNA.401-201ENST00000383965 117 ntBASIC2.3□□□□□ -2.04
LMO4P61968 Y_RNA.428-201ENST00000384078 102 ntBASIC2.3□□□□□ -2.04
LMO4P61968 Y_RNA.455-201ENST00000384230 98 ntBASIC2.3□□□□□ -2.04
LMO4P61968 SNORA41-201ENST00000384675 132 ntBASIC2.3□□□□□ -2.04
LMO4P61968 AL445529.1-201ENST00000398713 389 ntBASIC2.3□□□□□ -2.04
LMO4P61968 RNU2-68P-201ENST00000410878 191 ntBASIC2.3□□□□□ -2.04
LMO4P61968 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.3□□□□□ -2.04
LMO4P61968 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.3□□□□□ -2.04
LMO4P61968 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.3□□□□□ -2.04
LMO4P61968 MRPS18CP6-201ENST00000423587 223 ntBASIC2.3□□□□□ -2.04
LMO4P61968 AC096644.2-201ENST00000429278 159 ntBASIC2.3□□□□□ -2.04
LMO4P61968 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
LMO4P61968 RPL23AP50-201ENST00000434149 455 ntBASIC2.3□□□□□ -2.04
LMO4P61968 AL731563.1-201ENST00000442202 214 ntBASIC2.3□□□□□ -2.04
LMO4P61968 CECR9-201ENST00000453421 199 ntBASIC2.3□□□□□ -2.04
LMO4P61968 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.3□□□□□ -2.04
LMO4P61968 RPS15AP34-201ENST00000487776 387 ntBASIC2.3□□□□□ -2.04
LMO4P61968 AC018437.1-201ENST00000492214 406 ntBASIC2.3□□□□□ -2.04
LMO4P61968 AC015911.1-201ENST00000495111 156 ntBASIC2.3□□□□□ -2.04
LMO4P61968 AC116655.1-201ENST00000508324 901 ntBASIC2.3□□□□□ -2.04
LMO4P61968 RNU6-307P-201ENST00000516743 106 ntBASIC2.3□□□□□ -2.04
LMO4P61968 RNA5SP165-201ENST00000517142 115 ntBASIC2.3□□□□□ -2.04
LMO4P61968 AC245166.1-201ENST00000521012 253 ntBASIC2.3□□□□□ -2.04
LMO4P61968 AL157871.3-201ENST00000557231 293 ntBASIC2.3□□□□□ -2.04
LMO4P61968 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
LMO4P61968 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.3□□□□□ -2.04
LMO4P61968 AC092447.9-201ENST00000603395 144 ntBASIC2.3□□□□□ -2.04
LMO4P61968 AC004832.5-201ENST00000608677 401 ntBASIC2.3□□□□□ -2.04
LMO4P61968 AC090115.4-201ENST00000609970 188 ntBASIC2.3□□□□□ -2.04
LMO4P61968 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.3□□□□□ -2.04
LMO4P61968 RMST_4.1-201ENST00000616886 107 ntBASIC2.3□□□□□ -2.04
LMO4P61968 UCA1.1-201ENST00000620952 75 ntBASIC2.3□□□□□ -2.04
LMO4P61968 AC002064.3-201ENST00000623448 346 ntBASIC2.3□□□□□ -2.04
LMO4P61968 Z69720.2-201ENST00000624755 279 ntBASIC2.3□□□□□ -2.04
LMO4P61968 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LMO4P61968 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
LMO4P61968 AC005592.1-201ENST00000566527 1640 ntBASIC2.3□□□□□ -2.04
LMO4P61968 CDC27P3-201ENST00000635418 1910 ntBASIC2.3□□□□□ -2.04
LMO4P61968 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
LMO4P61968 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LMO4P61968 FAM35CP-201ENST00000554755 2470 ntBASIC2.3□□□□□ -2.04
LMO4P61968 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
LMO4P61968 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.3□□□□□ -2.04
LMO4P61968 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.3□□□□□ -2.04
LMO4P61968 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.3□□□□□ -2.04
LMO4P61968 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LMO4P61968 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LMO4P61968 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LMO4P61968 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
LMO4P61968 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
LMO4P61968 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.29□□□□□ -2.04
LMO4P61968 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
LMO4P61968 Y_RNA.33-201ENST00000362591 102 ntBASIC2.29□□□□□ -2.04
LMO4P61968 Y_RNA.324-201ENST00000365165 102 ntBASIC2.29□□□□□ -2.04
LMO4P61968 SET-203ENST00000372688 801 ntTSL 2 BASIC2.29□□□□□ -2.04
LMO4P61968 SNORD21-201ENST00000383953 95 ntBASIC2.29□□□□□ -2.04
LMO4P61968 MIR196B-201ENST00000384852 84 ntBASIC2.29□□□□□ -2.04
LMO4P61968 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.29□□□□□ -2.04
LMO4P61968 AL030996.1-201ENST00000411430 235 ntBASIC2.29□□□□□ -2.04
LMO4P61968 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
LMO4P61968 AC114482.1-201ENST00000418010 247 ntBASIC2.29□□□□□ -2.04
LMO4P61968 BX276092.3-201ENST00000424182 230 ntBASIC2.29□□□□□ -2.04
LMO4P61968 AC093151.1-201ENST00000427711 313 ntBASIC2.29□□□□□ -2.04
LMO4P61968 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.29□□□□□ -2.04
LMO4P61968 PCMTD1P1-201ENST00000455560 355 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms