Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 MIR6857-201ENST00000613267 93 ntBASIC0.66□□□□□ -2.3
AP3S2P59780 AC083806.3-201ENST00000614016 455 ntBASIC0.66□□□□□ -2.3
AP3S2P59780 U6.42-201ENST00000618440 107 ntBASIC0.66□□□□□ -2.3
AP3S2P59780 RNU6-462P-201ENST00000362659 105 ntBASIC0.65□□□□□ -2.31
AP3S2P59780 RNU6-384P-201ENST00000364900 104 ntBASIC0.65□□□□□ -2.31
AP3S2P59780 RNU6-438P-201ENST00000365561 103 ntBASIC0.65□□□□□ -2.31
AP3S2P59780 RNU5E-6P-201ENST00000365574 115 ntBASIC0.65□□□□□ -2.31
AP3S2P59780 RNU6-769P-201ENST00000384407 104 ntBASIC0.65□□□□□ -2.31
AP3S2P59780 RNU4-62P-201ENST00000410125 130 ntBASIC0.65□□□□□ -2.31
AP3S2P59780 COX6CP10-201ENST00000416832 224 ntBASIC0.65□□□□□ -2.31
AP3S2P59780 ARL5AP1-201ENST00000418991 388 ntBASIC0.65□□□□□ -2.31
AP3S2P59780 RPL23AP30-201ENST00000432419 501 ntBASIC0.65□□□□□ -2.31
AP3S2P59780 AL591806.2-201ENST00000433122 173 ntBASIC0.65□□□□□ -2.31
AP3S2P59780 RNU7-95P-201ENST00000459222 64 ntBASIC0.65□□□□□ -2.31
AP3S2P59780 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.65□□□□□ -2.31
AP3S2P59780 MTCO3P9-201ENST00000506989 781 ntBASIC0.65□□□□□ -2.31
AP3S2P59780 ATP5EP1-201ENST00000510257 156 ntBASIC0.65□□□□□ -2.31
AP3S2P59780 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.65□□□□□ -2.31
AP3S2P59780 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.65□□□□□ -2.31
AP3S2P59780 AC013828.2-201ENST00000532487 235 ntBASIC0.65□□□□□ -2.31
AP3S2P59780 AC008751.2-201ENST00000597885 980 ntBASIC0.65□□□□□ -2.31
AP3S2P59780 BCRP9-201ENST00000605312 388 ntBASIC0.65□□□□□ -2.31
AP3S2P59780 AL158032.1-201ENST00000605401 106 ntBASIC0.65□□□□□ -2.31
AP3S2P59780 AC091965.4-201ENST00000607691 587 ntBASIC0.65□□□□□ -2.31
AP3S2P59780 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.65□□□□□ -2.31
AP3S2P59780 AC097372.5-201ENST00000623665 376 ntBASIC0.65□□□□□ -2.31
AP3S2P59780 AL159152.1-201ENST00000635019 2587 ntBASIC0.64□□□□□ -2.31
AP3S2P59780 RNU4-15P-201ENST00000362613 141 ntBASIC0.64□□□□□ -2.31
AP3S2P59780 Y_RNA.192-201ENST00000363977 102 ntBASIC0.64□□□□□ -2.31
AP3S2P59780 Y_RNA.472-201ENST00000384322 102 ntBASIC0.64□□□□□ -2.31
AP3S2P59780 RNU6-1179P-201ENST00000384667 107 ntBASIC0.64□□□□□ -2.31
AP3S2P59780 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.64□□□□□ -2.31
AP3S2P59780 MTCO1P21-201ENST00000416634 589 ntBASIC0.64□□□□□ -2.31
AP3S2P59780 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.64□□□□□ -2.31
AP3S2P59780 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.64□□□□□ -2.31
AP3S2P59780 AL008629.1-201ENST00000438615 184 ntBASIC0.64□□□□□ -2.31
AP3S2P59780 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.64□□□□□ -2.31
AP3S2P59780 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.64□□□□□ -2.31
AP3S2P59780 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.64□□□□□ -2.31
AP3S2P59780 AC109445.1-201ENST00000512356 383 ntBASIC0.64□□□□□ -2.31
AP3S2P59780 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.64□□□□□ -2.31
AP3S2P59780 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.64□□□□□ -2.31
AP3S2P59780 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.64□□□□□ -2.31
AP3S2P59780 AC009712.1-201ENST00000564938 316 ntBASIC0.64□□□□□ -2.31
AP3S2P59780 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
AP3S2P59780 SNORA63.3-201ENST00000362682 132 ntBASIC0.63□□□□□ -2.31
AP3S2P59780 RNU6-511P-201ENST00000363496 107 ntBASIC0.63□□□□□ -2.31
AP3S2P59780 RNU1-96P-201ENST00000364163 162 ntBASIC0.63□□□□□ -2.31
AP3S2P59780 RNA5SP259-201ENST00000365541 109 ntBASIC0.63□□□□□ -2.31
AP3S2P59780 MIR544A-201ENST00000384855 91 ntBASIC0.63□□□□□ -2.31
AP3S2P59780 SNORA12.2-201ENST00000391040 156 ntBASIC0.63□□□□□ -2.31
AP3S2P59780 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.63□□□□□ -2.31
AP3S2P59780 GTF2IP13-201ENST00000438487 386 ntBASIC0.63□□□□□ -2.31
AP3S2P59780 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.63□□□□□ -2.31
AP3S2P59780 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.63□□□□□ -2.31
AP3S2P59780 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.63□□□□□ -2.31
AP3S2P59780 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.63□□□□□ -2.31
AP3S2P59780 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.63□□□□□ -2.31
AP3S2P59780 MIR3146-201ENST00000580367 79 ntBASIC0.63□□□□□ -2.31
AP3S2P59780 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.63□□□□□ -2.31
AP3S2P59780 AC009977.1-201ENST00000586015 570 ntBASIC0.63□□□□□ -2.31
AP3S2P59780 AL353997.5-201ENST00000618886 171 ntBASIC0.63□□□□□ -2.31
AP3S2P59780 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.63□□□□□ -2.31
AP3S2P59780 AP002782.1-201ENST00000623107 614 ntBASIC0.63□□□□□ -2.31
AP3S2P59780 AL356596.1-201ENST00000624230 379 ntBASIC0.63□□□□□ -2.31
AP3S2P59780 AC241585.2-209ENST00000638217 143 ntBASIC0.63□□□□□ -2.31
AP3S2P59780 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
AP3S2P59780 RNU11-5P-201ENST00000391216 129 ntBASIC0.62□□□□□ -2.31
AP3S2P59780 RNU2-62P-201ENST00000410868 191 ntBASIC0.62□□□□□ -2.31
AP3S2P59780 AC114482.1-201ENST00000418010 247 ntBASIC0.62□□□□□ -2.31
AP3S2P59780 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.62□□□□□ -2.31
AP3S2P59780 AC007969.2-201ENST00000441891 191 ntBASIC0.62□□□□□ -2.31
AP3S2P59780 AC108210.2-201ENST00000503681 201 ntBASIC0.62□□□□□ -2.31
AP3S2P59780 AC090142.3-201ENST00000519012 385 ntBASIC0.62□□□□□ -2.31
AP3S2P59780 CBX3P8-201ENST00000532412 525 ntBASIC0.62□□□□□ -2.31
AP3S2P59780 AC004817.2-201ENST00000561794 651 ntBASIC0.62□□□□□ -2.31
AP3S2P59780 MIR4709-201ENST00000577272 72 ntBASIC0.62□□□□□ -2.31
AP3S2P59780 MIR3945-201ENST00000581853 98 ntBASIC0.62□□□□□ -2.31
AP3S2P59780 MIR548AC-201ENST00000585049 88 ntBASIC0.62□□□□□ -2.31
AP3S2P59780 AC110760.3-201ENST00000598794 467 ntBASIC0.62□□□□□ -2.31
AP3S2P59780 AL034555.1-201ENST00000604816 211 ntBASIC0.62□□□□□ -2.31
AP3S2P59780 AC105129.3-201ENST00000605455 485 ntBASIC0.62□□□□□ -2.31
AP3S2P59780 AC131159.1-201ENST00000621854 213 ntBASIC0.62□□□□□ -2.31
AP3S2P59780 AC091895.1-201ENST00000624494 256 ntBASIC0.62□□□□□ -2.31
AP3S2P59780 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
AP3S2P59780 Y_RNA.140-201ENST00000363474 103 ntBASIC0.61□□□□□ -2.31
AP3S2P59780 SNORA32.2-201ENST00000384049 122 ntBASIC0.61□□□□□ -2.31
AP3S2P59780 RNU6-413P-201ENST00000384115 107 ntBASIC0.61□□□□□ -2.31
AP3S2P59780 MIR578-201ENST00000384828 96 ntBASIC0.61□□□□□ -2.31
AP3S2P59780 AL136310.1-201ENST00000404926 654 ntBASIC0.61□□□□□ -2.31
AP3S2P59780 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.61□□□□□ -2.31
AP3S2P59780 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.61□□□□□ -2.31
AP3S2P59780 AC063976.4-201ENST00000421971 163 ntBASIC0.61□□□□□ -2.31
AP3S2P59780 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.61□□□□□ -2.31
AP3S2P59780 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.61□□□□□ -2.31
AP3S2P59780 SNORD124-201ENST00000459577 104 ntBASIC0.61□□□□□ -2.31
AP3S2P59780 AC022447.4-201ENST00000504053 364 ntBASIC0.61□□□□□ -2.31
AP3S2P59780 SNORA31.4-201ENST00000516049 129 ntBASIC0.61□□□□□ -2.31
AP3S2P59780 RNU6-165P-201ENST00000517170 99 ntBASIC0.61□□□□□ -2.31
AP3S2P59780 AC023050.2-201ENST00000544968 387 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms