Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 RNU5E-7P-201ENST00000365290 117 ntBASIC1.39□□□□□ -2.19
CLDN6P56747 RNU6-160P-201ENST00000384591 107 ntBASIC1.39□□□□□ -2.19
CLDN6P56747 Y_RNA.540-201ENST00000384638 111 ntBASIC1.39□□□□□ -2.19
CLDN6P56747 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CLDN6P56747 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.39□□□□□ -2.19
CLDN6P56747 AL035666.1-201ENST00000446195 348 ntBASIC1.39□□□□□ -2.19
CLDN6P56747 MTND2P39-201ENST00000457230 764 ntBASIC1.39□□□□□ -2.19
CLDN6P56747 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.39□□□□□ -2.19
CLDN6P56747 AC009646.1-201ENST00000510455 318 ntBASIC1.39□□□□□ -2.19
CLDN6P56747 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.39□□□□□ -2.19
CLDN6P56747 RNU6-970P-201ENST00000516312 107 ntBASIC1.39□□□□□ -2.19
CLDN6P56747 RNVU1-2-201ENST00000516326 135 ntBASIC1.39□□□□□ -2.19
CLDN6P56747 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.39□□□□□ -2.19
CLDN6P56747 MTND2P7-201ENST00000521337 640 ntBASIC1.39□□□□□ -2.19
CLDN6P56747 AP005435.4-201ENST00000529514 284 ntBASIC1.39□□□□□ -2.19
CLDN6P56747 AP005136.1-201ENST00000579765 429 ntBASIC1.39□□□□□ -2.19
CLDN6P56747 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.39□□□□□ -2.19
CLDN6P56747 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.39□□□□□ -2.19
CLDN6P56747 AC008521.1-201ENST00000587471 187 ntBASIC1.39□□□□□ -2.19
CLDN6P56747 AC136443.5-201ENST00000603741 370 ntBASIC1.39□□□□□ -2.19
CLDN6P56747 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.39□□□□□ -2.19
CLDN6P56747 AC092140.2-201ENST00000618027 521 ntBASIC1.39□□□□□ -2.19
CLDN6P56747 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.39□□□□□ -2.19
CLDN6P56747 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.39□□□□□ -2.19
CLDN6P56747 AC007671.2-201ENST00000637344 619 ntBASIC1.39□□□□□ -2.19
CLDN6P56747 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
CLDN6P56747 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CLDN6P56747 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.39□□□□□ -2.19
CLDN6P56747 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CLDN6P56747 RNU6-61P-201ENST00000365528 109 ntBASIC1.38□□□□□ -2.19
CLDN6P56747 RNU6-338P-201ENST00000383888 105 ntBASIC1.38□□□□□ -2.19
CLDN6P56747 RNA5SP100-201ENST00000410903 110 ntBASIC1.38□□□□□ -2.19
CLDN6P56747 RNA5SP59-201ENST00000410922 110 ntBASIC1.38□□□□□ -2.19
CLDN6P56747 RPS6P15-201ENST00000431996 751 ntBASIC1.38□□□□□ -2.19
CLDN6P56747 AL591043.1-201ENST00000432461 424 ntBASIC1.38□□□□□ -2.19
CLDN6P56747 AC007969.2-201ENST00000441891 191 ntBASIC1.38□□□□□ -2.19
CLDN6P56747 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.38□□□□□ -2.19
CLDN6P56747 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.38□□□□□ -2.19
CLDN6P56747 RNU1-98P-201ENST00000458992 160 ntBASIC1.38□□□□□ -2.19
CLDN6P56747 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.38□□□□□ -2.19
CLDN6P56747 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.38□□□□□ -2.19
CLDN6P56747 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.38□□□□□ -2.19
CLDN6P56747 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.38□□□□□ -2.19
CLDN6P56747 AC010900.2-201ENST00000604508 210 ntBASIC1.38□□□□□ -2.19
CLDN6P56747 AP000654.2-201ENST00000605633 586 ntBASIC1.38□□□□□ -2.19
CLDN6P56747 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.38□□□□□ -2.19
CLDN6P56747 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.38□□□□□ -2.19
CLDN6P56747 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.38□□□□□ -2.19
CLDN6P56747 AC006927.3-201ENST00000638789 384 ntBASIC1.38□□□□□ -2.19
CLDN6P56747 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CLDN6P56747 RNU1-22P-201ENST00000363334 158 ntBASIC1.37□□□□□ -2.19
CLDN6P56747 RNU6-527P-201ENST00000363425 104 ntBASIC1.37□□□□□ -2.19
CLDN6P56747 RNU5F-7P-201ENST00000363696 115 ntBASIC1.37□□□□□ -2.19
CLDN6P56747 RNA5SP493-201ENST00000364115 91 ntBASIC1.37□□□□□ -2.19
CLDN6P56747 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.37□□□□□ -2.19
CLDN6P56747 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.37□□□□□ -2.19
CLDN6P56747 RNU6-439P-201ENST00000384188 106 ntBASIC1.37□□□□□ -2.19
CLDN6P56747 MIR544A-201ENST00000384855 91 ntBASIC1.37□□□□□ -2.19
CLDN6P56747 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.37□□□□□ -2.19
CLDN6P56747 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.37□□□□□ -2.19
CLDN6P56747 CALM2P2-201ENST00000428512 440 ntBASIC1.37□□□□□ -2.19
CLDN6P56747 MTCYBP39-201ENST00000437562 491 ntBASIC1.37□□□□□ -2.19
CLDN6P56747 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.37□□□□□ -2.19
CLDN6P56747 KATNBL1P3-201ENST00000443475 909 ntBASIC1.37□□□□□ -2.19
CLDN6P56747 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.37□□□□□ -2.19
CLDN6P56747 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.37□□□□□ -2.19
CLDN6P56747 RNA5SP220-201ENST00000516298 104 ntBASIC1.37□□□□□ -2.19
CLDN6P56747 RNA5SP480-201ENST00000516840 109 ntBASIC1.37□□□□□ -2.19
CLDN6P56747 AC008015.1-201ENST00000555505 465 ntBASIC1.37□□□□□ -2.19
CLDN6P56747 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.37□□□□□ -2.19
CLDN6P56747 AC005014.3-201ENST00000605985 190 ntBASIC1.37□□□□□ -2.19
CLDN6P56747 AL590240.4-201ENST00000616908 390 ntBASIC1.37□□□□□ -2.19
CLDN6P56747 AC097372.5-201ENST00000623665 376 ntBASIC1.37□□□□□ -2.19
CLDN6P56747 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CLDN6P56747 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CLDN6P56747 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CLDN6P56747 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CLDN6P56747 Y_RNA.22-201ENST00000362492 102 ntBASIC1.36□□□□□ -2.19
CLDN6P56747 SNORA62.1-201ENST00000364287 154 ntBASIC1.36□□□□□ -2.19
CLDN6P56747 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CLDN6P56747 AL357139.1-201ENST00000407792 426 ntBASIC1.36□□□□□ -2.19
CLDN6P56747 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.36□□□□□ -2.19
CLDN6P56747 NCOR1P3-201ENST00000420479 303 ntBASIC1.36□□□□□ -2.19
CLDN6P56747 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.36□□□□□ -2.19
CLDN6P56747 AC000111.3-201ENST00000433478 193 ntBASIC1.36□□□□□ -2.19
CLDN6P56747 AL512286.1-201ENST00000439244 400 ntBASIC1.36□□□□□ -2.19
CLDN6P56747 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.36□□□□□ -2.19
CLDN6P56747 AC021146.2-201ENST00000504736 556 ntBASIC1.36□□□□□ -2.19
CLDN6P56747 MTND3P25-201ENST00000509243 135 ntBASIC1.36□□□□□ -2.19
CLDN6P56747 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.36□□□□□ -2.19
CLDN6P56747 COPS8P3-201ENST00000526024 482 ntBASIC1.36□□□□□ -2.19
CLDN6P56747 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.36□□□□□ -2.19
CLDN6P56747 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.36□□□□□ -2.19
CLDN6P56747 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.36□□□□□ -2.19
CLDN6P56747 ELOCP32-201ENST00000548625 324 ntBASIC1.36□□□□□ -2.19
CLDN6P56747 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.36□□□□□ -2.19
CLDN6P56747 HMGN1P30-201ENST00000589286 268 ntBASIC1.36□□□□□ -2.19
CLDN6P56747 MIR6078-201ENST00000611069 100 ntBASIC1.36□□□□□ -2.19
CLDN6P56747 AC138749.5-201ENST00000611461 208 ntBASIC1.36□□□□□ -2.19
CLDN6P56747 AC116165.2-201ENST00000616705 206 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms