Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 ACA59.1-201ENST00000515966 143 ntBASIC3.13□□□□□ -1.91
COPAP53621 Y_RNA.670-201ENST00000516255 105 ntBASIC3.13□□□□□ -1.91
COPAP53621 RPPH1-2P-201ENST00000516688 293 ntBASIC3.13□□□□□ -1.91
COPAP53621 RNU6-1213P-201ENST00000517075 94 ntBASIC3.13□□□□□ -1.91
COPAP53621 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.13□□□□□ -1.91
COPAP53621 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.13□□□□□ -1.91
COPAP53621 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.13□□□□□ -1.91
COPAP53621 AC007536.1-201ENST00000533382 349 ntBASIC3.13□□□□□ -1.91
COPAP53621 AL391813.1-201ENST00000603098 260 ntBASIC3.13□□□□□ -1.91
COPAP53621 AC018889.1-201ENST00000605372 397 ntBASIC3.13□□□□□ -1.91
COPAP53621 MIR1302-2-201ENST00000607096 138 ntBASIC3.13□□□□□ -1.91
COPAP53621 AC005046.1-201ENST00000608515 625 ntBASIC3.13□□□□□ -1.91
COPAP53621 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.13□□□□□ -1.91
COPAP53621 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.13□□□□□ -1.91
COPAP53621 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
COPAP53621 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
COPAP53621 Y_RNA.2-201ENST00000362330 96 ntBASIC3.12□□□□□ -1.91
COPAP53621 XGY1-201ENST00000381172 446 ntBASIC3.12□□□□□ -1.91
COPAP53621 Y_RNA.473-201ENST00000384333 102 ntBASIC3.12□□□□□ -1.91
COPAP53621 RNU6-843P-201ENST00000384454 104 ntBASIC3.12□□□□□ -1.91
COPAP53621 RNU6-310P-201ENST00000384655 107 ntBASIC3.12□□□□□ -1.91
COPAP53621 SNORD67-201ENST00000390833 111 ntBASIC3.12□□□□□ -1.91
COPAP53621 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COPAP53621 RPS29P13-201ENST00000402041 169 ntBASIC3.12□□□□□ -1.91
COPAP53621 Z82205.1-201ENST00000428456 297 ntBASIC3.12□□□□□ -1.91
COPAP53621 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COPAP53621 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.12□□□□□ -1.91
COPAP53621 AC008571.1-201ENST00000467232 300 ntBASIC3.12□□□□□ -1.91
COPAP53621 RNU6-1153P-201ENST00000516760 105 ntBASIC3.12□□□□□ -1.91
COPAP53621 SNORA31.18-201ENST00000517043 134 ntBASIC3.12□□□□□ -1.91
COPAP53621 AC093249.1-201ENST00000567049 203 ntBASIC3.12□□□□□ -1.91
COPAP53621 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.12□□□□□ -1.91
COPAP53621 AC011494.1-201ENST00000596454 237 ntBASIC3.12□□□□□ -1.91
COPAP53621 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.12□□□□□ -1.91
COPAP53621 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.12□□□□□ -1.91
COPAP53621 AC024581.2-201ENST00000619986 252 ntBASIC3.12□□□□□ -1.91
COPAP53621 AL137790.1-201ENST00000634283 177 ntBASIC3.12□□□□□ -1.91
COPAP53621 RBBP8P1-201ENST00000449447 1844 ntBASIC3.12□□□□□ -1.91
COPAP53621 MTND5P10-201ENST00000603719 1809 ntBASIC3.12□□□□□ -1.91
COPAP53621 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.11□□□□□ -1.91
COPAP53621 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
COPAP53621 Y_RNA.187-201ENST00000363918 113 ntBASIC3.11□□□□□ -1.91
COPAP53621 MIR521-1-201ENST00000384902 87 ntBASIC3.11□□□□□ -1.91
COPAP53621 AL133475.1-201ENST00000404414 305 ntBASIC3.11□□□□□ -1.91
COPAP53621 RN7SKP123-201ENST00000410732 291 ntBASIC3.11□□□□□ -1.91
COPAP53621 Y_RNA.646-201ENST00000410980 101 ntBASIC3.11□□□□□ -1.91
COPAP53621 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.11□□□□□ -1.91
COPAP53621 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.11□□□□□ -1.91
COPAP53621 AL133396.1-201ENST00000432048 687 ntBASIC3.11□□□□□ -1.91
COPAP53621 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.11□□□□□ -1.91
COPAP53621 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.11□□□□□ -1.91
COPAP53621 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.11□□□□□ -1.91
COPAP53621 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.11□□□□□ -1.91
COPAP53621 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.11□□□□□ -1.91
COPAP53621 ELOCP24-201ENST00000456370 334 ntBASIC3.11□□□□□ -1.91
COPAP53621 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.11□□□□□ -1.91
COPAP53621 RNU7-152P-201ENST00000458982 64 ntBASIC3.11□□□□□ -1.91
COPAP53621 RPL7P42-201ENST00000481005 679 ntBASIC3.11□□□□□ -1.91
COPAP53621 AC027575.1-201ENST00000481064 460 ntBASIC3.11□□□□□ -1.91
COPAP53621 AC005741.1-201ENST00000511094 432 ntBASIC3.11□□□□□ -1.91
COPAP53621 MRPS36P2-201ENST00000512569 299 ntBASIC3.11□□□□□ -1.91
COPAP53621 AC093303.1-201ENST00000514549 295 ntBASIC3.11□□□□□ -1.91
COPAP53621 SMURF2P1-201ENST00000514992 481 ntBASIC3.11□□□□□ -1.91
COPAP53621 RNU6-307P-201ENST00000516743 106 ntBASIC3.11□□□□□ -1.91
COPAP53621 RNU6-612P-201ENST00000516909 102 ntBASIC3.11□□□□□ -1.91
COPAP53621 SNORA31.23-201ENST00000517219 133 ntBASIC3.11□□□□□ -1.91
COPAP53621 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.11□□□□□ -1.91
COPAP53621 AC109446.1-201ENST00000566172 220 ntBASIC3.11□□□□□ -1.91
COPAP53621 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.11□□□□□ -1.91
COPAP53621 CPDP1-201ENST00000579660 283 ntBASIC3.11□□□□□ -1.91
COPAP53621 BNIP3P16-201ENST00000589779 534 ntBASIC3.11□□□□□ -1.91
COPAP53621 CYP2C61P-201ENST00000604072 290 ntBASIC3.11□□□□□ -1.91
COPAP53621 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.11□□□□□ -1.91
COPAP53621 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
COPAP53621 HAUS6P2-201ENST00000433254 2404 ntBASIC3.1□□□□□ -1.91
COPAP53621 MIR22-201ENST00000362190 85 ntBASIC3.1□□□□□ -1.91
COPAP53621 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
COPAP53621 AL354751.2-201ENST00000415471 210 ntBASIC3.1□□□□□ -1.91
COPAP53621 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.1□□□□□ -1.91
COPAP53621 AC005534.2-201ENST00000431047 433 ntBASIC3.1□□□□□ -1.91
COPAP53621 AC004383.1-201ENST00000438135 289 ntBASIC3.1□□□□□ -1.91
COPAP53621 OSTCP8-201ENST00000445117 448 ntBASIC3.1□□□□□ -1.91
COPAP53621 FTH1P25-201ENST00000447665 469 ntBASIC3.1□□□□□ -1.91
COPAP53621 MTCO3P10-201ENST00000455912 772 ntBASIC3.1□□□□□ -1.91
COPAP53621 AC097473.1-201ENST00000508142 408 ntBASIC3.1□□□□□ -1.91
COPAP53621 PTP4A1P4-201ENST00000512479 322 ntBASIC3.1□□□□□ -1.91
COPAP53621 RN7SKP43-201ENST00000516173 320 ntBASIC3.1□□□□□ -1.91
COPAP53621 VN1R107P-201ENST00000601784 209 ntBASIC3.1□□□□□ -1.91
COPAP53621 MIR3976-201ENST00000606807 139 ntBASIC3.1□□□□□ -1.91
COPAP53621 MIR7106-201ENST00000612419 65 ntBASIC3.1□□□□□ -1.91
COPAP53621 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
COPAP53621 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.09□□□□□ -1.91
COPAP53621 RNU6-1059P-201ENST00000363752 98 ntBASIC3.09□□□□□ -1.91
COPAP53621 Y_RNA.394-201ENST00000383942 103 ntBASIC3.09□□□□□ -1.91
COPAP53621 Y_RNA.404-201ENST00000383978 102 ntBASIC3.09□□□□□ -1.91
COPAP53621 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.09□□□□□ -1.91
COPAP53621 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.09□□□□□ -1.91
COPAP53621 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.09□□□□□ -1.91
COPAP53621 USMG5P1-201ENST00000425964 177 ntBASIC3.09□□□□□ -1.91
COPAP53621 MTND3P9-201ENST00000429526 346 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms