Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
NEK3P51956 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
NEK3P51956 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
NEK3P51956 AC009541.1-201ENST00000438279 2662 ntBASIC3.03□□□□□ -1.92
NEK3P51956 RNU1-109P-201ENST00000383960 147 ntBASIC3.03□□□□□ -1.92
NEK3P51956 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.03□□□□□ -1.92
NEK3P51956 AL139281.1-201ENST00000422120 335 ntBASIC3.03□□□□□ -1.92
NEK3P51956 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.03□□□□□ -1.92
NEK3P51956 PMCHL2-203ENST00000457791 237 ntBASIC3.03□□□□□ -1.92
NEK3P51956 RNU7-187P-201ENST00000458985 68 ntBASIC3.03□□□□□ -1.92
NEK3P51956 AC117440.1-201ENST00000474107 571 ntBASIC3.03□□□□□ -1.92
NEK3P51956 RN7SL499P-201ENST00000481141 276 ntBASIC3.03□□□□□ -1.92
NEK3P51956 HMGB1P35-201ENST00000503360 598 ntBASIC3.03□□□□□ -1.92
NEK3P51956 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.03□□□□□ -1.92
NEK3P51956 RNU5F-2P-201ENST00000516066 82 ntBASIC3.03□□□□□ -1.92
NEK3P51956 SNORA48.11-201ENST00000517015 89 ntBASIC3.03□□□□□ -1.92
NEK3P51956 RNU6-586P-201ENST00000517265 104 ntBASIC3.03□□□□□ -1.92
NEK3P51956 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.03□□□□□ -1.92
NEK3P51956 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.03□□□□□ -1.92
NEK3P51956 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.03□□□□□ -1.92
NEK3P51956 EIF4BP1-201ENST00000554881 351 ntBASIC3.03□□□□□ -1.92
NEK3P51956 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.03□□□□□ -1.92
NEK3P51956 AC026464.5-201ENST00000562497 722 ntBASIC3.03□□□□□ -1.92
NEK3P51956 AC093249.1-201ENST00000567049 203 ntBASIC3.03□□□□□ -1.92
NEK3P51956 AC005668.1-201ENST00000571142 476 ntBASIC3.03□□□□□ -1.92
NEK3P51956 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.03□□□□□ -1.92
NEK3P51956 AC060766.3-201ENST00000591442 263 ntBASIC3.03□□□□□ -1.92
NEK3P51956 uc_338.5-201ENST00000611839 155 ntBASIC3.03□□□□□ -1.92
NEK3P51956 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.03□□□□□ -1.92
NEK3P51956 AC006386.2-201ENST00000624491 75 ntBASIC3.03□□□□□ -1.92
NEK3P51956 AC012005.1-201ENST00000624575 75 ntBASIC3.03□□□□□ -1.92
NEK3P51956 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.03□□□□□ -1.92
NEK3P51956 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.03□□□□□ -1.92
NEK3P51956 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
NEK3P51956 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.02□□□□□ -1.93
NEK3P51956 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.02□□□□□ -1.93
NEK3P51956 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
NEK3P51956 AL451074.5-201ENST00000415894 435 ntBASIC3.02□□□□□ -1.93
NEK3P51956 AL590556.1-201ENST00000423231 483 ntBASIC3.02□□□□□ -1.93
NEK3P51956 AC236972.1-201ENST00000433225 199 ntBASIC3.02□□□□□ -1.93
NEK3P51956 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.02□□□□□ -1.93
NEK3P51956 AC104564.1-201ENST00000493028 407 ntBASIC3.02□□□□□ -1.93
NEK3P51956 RPL39P5-202ENST00000512505 151 ntBASIC3.02□□□□□ -1.93
NEK3P51956 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.02□□□□□ -1.93
NEK3P51956 AC007536.1-201ENST00000533382 349 ntBASIC3.02□□□□□ -1.93
NEK3P51956 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.02□□□□□ -1.93
NEK3P51956 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.02□□□□□ -1.93
NEK3P51956 AC007375.1-201ENST00000554513 578 ntBASIC3.02□□□□□ -1.93
NEK3P51956 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.02□□□□□ -1.93
NEK3P51956 AL034555.1-201ENST00000604816 211 ntBASIC3.02□□□□□ -1.93
NEK3P51956 AC124303.1-201ENST00000605703 360 ntBASIC3.02□□□□□ -1.93
NEK3P51956 AC007318.2-201ENST00000620999 243 ntBASIC3.02□□□□□ -1.93
NEK3P51956 SNORD98-201ENST00000636377 67 ntBASIC3.02□□□□□ -1.93
NEK3P51956 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
NEK3P51956 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
NEK3P51956 AL161431.1-201ENST00000618966 4205 ntBASIC3.01□□□□□ -1.93
NEK3P51956 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
NEK3P51956 RNU6-593P-201ENST00000364716 112 ntBASIC3.01□□□□□ -1.93
NEK3P51956 U3.13-201ENST00000364804 214 ntBASIC3.01□□□□□ -1.93
NEK3P51956 RNU6-790P-201ENST00000384479 105 ntBASIC3.01□□□□□ -1.93
NEK3P51956 AL590004.2-201ENST00000404787 371 ntBASIC3.01□□□□□ -1.93
NEK3P51956 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.01□□□□□ -1.93
NEK3P51956 AL590632.1-201ENST00000424289 371 ntBASIC3.01□□□□□ -1.93
NEK3P51956 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.01□□□□□ -1.93
NEK3P51956 AC107016.2-201ENST00000547968 190 ntBASIC3.01□□□□□ -1.93
NEK3P51956 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.01□□□□□ -1.93
NEK3P51956 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.01□□□□□ -1.93
NEK3P51956 AC019193.3-201ENST00000609144 554 ntBASIC3.01□□□□□ -1.93
NEK3P51956 AL161423.1-201ENST00000613700 262 ntBASIC3.01□□□□□ -1.93
NEK3P51956 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NEK3P51956 Y_RNA.88-201ENST00000363029 99 ntBASIC3□□□□□ -1.93
NEK3P51956 U8.8-201ENST00000365399 135 ntBASIC3□□□□□ -1.93
NEK3P51956 RNU6-784P-201ENST00000384330 106 ntBASIC3□□□□□ -1.93
NEK3P51956 EEF1A1P41-201ENST00000414667 207 ntBASIC3□□□□□ -1.93
NEK3P51956 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3□□□□□ -1.93
NEK3P51956 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3□□□□□ -1.93
NEK3P51956 MTND3P9-201ENST00000429526 346 ntBASIC3□□□□□ -1.93
NEK3P51956 AC107083.1-201ENST00000439643 279 ntBASIC3□□□□□ -1.93
NEK3P51956 AL353572.1-201ENST00000442490 417 ntBASIC3□□□□□ -1.93
NEK3P51956 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3□□□□□ -1.93
NEK3P51956 AC090515.1-201ENST00000465295 476 ntBASIC3□□□□□ -1.93
NEK3P51956 SNRPGP7-201ENST00000469016 106 ntBASIC3□□□□□ -1.93
NEK3P51956 AC083906.5-201ENST00000503722 328 ntBASIC3□□□□□ -1.93
NEK3P51956 ACA59.1-201ENST00000515966 143 ntBASIC3□□□□□ -1.93
NEK3P51956 RNU1-54P-201ENST00000517181 120 ntBASIC3□□□□□ -1.93
NEK3P51956 MIR4790-201ENST00000577799 79 ntBASIC3□□□□□ -1.93
NEK3P51956 AL359198.2-201ENST00000611836 194 ntBASIC3□□□□□ -1.93
NEK3P51956 AL137790.1-201ENST00000634283 177 ntBASIC3□□□□□ -1.93
NEK3P51956 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3□□□□□ -1.93
NEK3P51956 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3□□□□□ -1.93
NEK3P51956 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
NEK3P51956 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3□□□□□ -1.93
NEK3P51956 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3□□□□□ -1.93
NEK3P51956 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.99□□□□□ -1.93
NEK3P51956 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NEK3P51956 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NEK3P51956 Y_RNA.151-201ENST00000363566 112 ntBASIC2.99□□□□□ -1.93
NEK3P51956 SNORA38-201ENST00000363946 132 ntBASIC2.99□□□□□ -1.93
NEK3P51956 RNA5SP125-201ENST00000364843 120 ntBASIC2.99□□□□□ -1.93
NEK3P51956 RNU6-596P-201ENST00000365395 98 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms