Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 MTCO2P11-201ENST00000431069 680 ntBASIC2.1□□□□□ -2.07
GPC3P51654 AC003989.2-201ENST00000440224 169 ntBASIC2.1□□□□□ -2.07
GPC3P51654 MTND1P29-201ENST00000448112 647 ntBASIC2.1□□□□□ -2.07
GPC3P51654 MTND1P18-201ENST00000448191 573 ntBASIC2.1□□□□□ -2.07
GPC3P51654 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.1□□□□□ -2.07
GPC3P51654 AL356010.1-201ENST00000456364 102 ntBASIC2.1□□□□□ -2.07
GPC3P51654 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.1□□□□□ -2.07
GPC3P51654 AL121594.1-201ENST00000475906 575 ntBASIC2.1□□□□□ -2.07
GPC3P51654 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.1□□□□□ -2.07
GPC3P51654 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.1□□□□□ -2.07
GPC3P51654 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.1□□□□□ -2.07
GPC3P51654 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.1□□□□□ -2.07
GPC3P51654 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.1□□□□□ -2.07
GPC3P51654 AC026585.1-201ENST00000619582 524 ntBASIC2.1□□□□□ -2.07
GPC3P51654 AC048344.4-201ENST00000619744 527 ntBASIC2.1□□□□□ -2.07
GPC3P51654 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.1□□□□□ -2.07
GPC3P51654 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.09□□□□□ -2.07
GPC3P51654 RNU6-371P-201ENST00000364283 108 ntBASIC2.09□□□□□ -2.07
GPC3P51654 RNU6-1119P-201ENST00000384349 108 ntBASIC2.09□□□□□ -2.07
GPC3P51654 MIR29B2-201ENST00000385055 81 ntBASIC2.09□□□□□ -2.07
GPC3P51654 RNU6-482P-201ENST00000391068 107 ntBASIC2.09□□□□□ -2.07
GPC3P51654 CBX3P9-201ENST00000402326 552 ntBASIC2.09□□□□□ -2.07
GPC3P51654 AL356432.1-201ENST00000405809 419 ntBASIC2.09□□□□□ -2.07
GPC3P51654 RNU2-29P-201ENST00000410423 189 ntBASIC2.09□□□□□ -2.07
GPC3P51654 AL158823.1-201ENST00000418441 478 ntBASIC2.09□□□□□ -2.07
GPC3P51654 EIF1AXP1-201ENST00000419267 435 ntBASIC2.09□□□□□ -2.07
GPC3P51654 AC096920.1-201ENST00000423991 241 ntBASIC2.09□□□□□ -2.07
GPC3P51654 HMGN2P19-201ENST00000425149 265 ntBASIC2.09□□□□□ -2.07
GPC3P51654 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.09□□□□□ -2.07
GPC3P51654 AL358934.1-201ENST00000432346 324 ntBASIC2.09□□□□□ -2.07
GPC3P51654 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.09□□□□□ -2.07
GPC3P51654 RN7SKP256-201ENST00000517201 314 ntBASIC2.09□□□□□ -2.07
GPC3P51654 SNORA31.23-201ENST00000517219 133 ntBASIC2.09□□□□□ -2.07
GPC3P51654 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.09□□□□□ -2.07
GPC3P51654 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.09□□□□□ -2.07
GPC3P51654 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.09□□□□□ -2.07
GPC3P51654 AL096840.1-201ENST00000603287 93 ntBASIC2.09□□□□□ -2.07
GPC3P51654 AC008536.2-201ENST00000607284 349 ntBASIC2.09□□□□□ -2.07
GPC3P51654 DUXAP9-208ENST00000622815 614 ntBASIC2.09□□□□□ -2.07
GPC3P51654 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.09□□□□□ -2.07
GPC3P51654 AL359740.1-201ENST00000624340 592 ntBASIC2.09□□□□□ -2.07
GPC3P51654 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
GPC3P51654 Y_RNA.51-201ENST00000362725 102 ntBASIC2.08□□□□□ -2.08
GPC3P51654 RNU6-116P-201ENST00000384042 109 ntBASIC2.08□□□□□ -2.08
GPC3P51654 RNU6-1029P-201ENST00000384109 107 ntBASIC2.08□□□□□ -2.08
GPC3P51654 RNU6-611P-201ENST00000384276 104 ntBASIC2.08□□□□□ -2.08
GPC3P51654 MIR578-201ENST00000384828 96 ntBASIC2.08□□□□□ -2.08
GPC3P51654 RNU6-550P-201ENST00000391057 101 ntBASIC2.08□□□□□ -2.08
GPC3P51654 RNU2-20P-201ENST00000410425 191 ntBASIC2.08□□□□□ -2.08
GPC3P51654 EEF1A1P40-201ENST00000412883 573 ntBASIC2.08□□□□□ -2.08
GPC3P51654 RPL21P90-201ENST00000415692 466 ntBASIC2.08□□□□□ -2.08
GPC3P51654 AC074117.2-201ENST00000417130 397 ntBASIC2.08□□□□□ -2.08
GPC3P51654 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.08□□□□□ -2.08
GPC3P51654 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.08□□□□□ -2.08
GPC3P51654 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.08□□□□□ -2.08
GPC3P51654 RPL7P54-201ENST00000438336 674 ntBASIC2.08□□□□□ -2.08
GPC3P51654 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.08□□□□□ -2.08
GPC3P51654 RPL23AP3-201ENST00000453844 468 ntBASIC2.08□□□□□ -2.08
GPC3P51654 SNORA43.2-201ENST00000516652 128 ntBASIC2.08□□□□□ -2.08
GPC3P51654 RNU2-44P-201ENST00000516795 194 ntBASIC2.08□□□□□ -2.08
GPC3P51654 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.08□□□□□ -2.08
GPC3P51654 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.08□□□□□ -2.08
GPC3P51654 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.08□□□□□ -2.08
GPC3P51654 AGGF1P4-201ENST00000568249 801 ntBASIC2.08□□□□□ -2.08
GPC3P51654 MIR4703-201ENST00000577728 79 ntBASIC2.08□□□□□ -2.08
GPC3P51654 MIR4299-201ENST00000577899 72 ntBASIC2.08□□□□□ -2.08
GPC3P51654 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.08□□□□□ -2.08
GPC3P51654 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.08□□□□□ -2.08
GPC3P51654 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.08□□□□□ -2.08
GPC3P51654 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
GPC3P51654 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.08□□□□□ -2.08
GPC3P51654 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
GPC3P51654 MTND4P14-201ENST00000435799 1354 ntBASIC2.08□□□□□ -2.08
GPC3P51654 SNORD115-3-201ENST00000363100 82 ntBASIC2.07□□□□□ -2.08
GPC3P51654 RNU6-1274P-201ENST00000384557 107 ntBASIC2.07□□□□□ -2.08
GPC3P51654 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
GPC3P51654 AL031779.1-201ENST00000415663 330 ntBASIC2.07□□□□□ -2.08
GPC3P51654 PGBD4P6-201ENST00000421501 610 ntBASIC2.07□□□□□ -2.08
GPC3P51654 AC002486.1-201ENST00000435098 391 ntBASIC2.07□□□□□ -2.08
GPC3P51654 HMGB1P31-201ENST00000437242 427 ntBASIC2.07□□□□□ -2.08
GPC3P51654 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.07□□□□□ -2.08
GPC3P51654 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.07□□□□□ -2.08
GPC3P51654 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.07□□□□□ -2.08
GPC3P51654 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.07□□□□□ -2.08
GPC3P51654 snoU13.14-201ENST00000459372 104 ntBASIC2.07□□□□□ -2.08
GPC3P51654 AP001025.1-201ENST00000486139 332 ntBASIC2.07□□□□□ -2.08
GPC3P51654 RPL23AP63-201ENST00000498752 471 ntBASIC2.07□□□□□ -2.08
GPC3P51654 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.07□□□□□ -2.08
GPC3P51654 RNU6-405P-201ENST00000516637 110 ntBASIC2.07□□□□□ -2.08
GPC3P51654 AP003392.2-201ENST00000527269 208 ntBASIC2.07□□□□□ -2.08
GPC3P51654 AP003034.1-201ENST00000534621 422 ntBASIC2.07□□□□□ -2.08
GPC3P51654 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.07□□□□□ -2.08
GPC3P51654 AC087683.1-201ENST00000591187 441 ntBASIC2.07□□□□□ -2.08
GPC3P51654 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.07□□□□□ -2.08
GPC3P51654 RMST_4.1-201ENST00000616886 107 ntBASIC2.07□□□□□ -2.08
GPC3P51654 AL353997.5-201ENST00000618886 171 ntBASIC2.07□□□□□ -2.08
GPC3P51654 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
GPC3P51654 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
GPC3P51654 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
GPC3P51654 RNA5SP465-201ENST00000391195 109 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms