Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.46□□□□□ -2.34
SRP9P49458 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.46□□□□□ -2.34
SRP9P49458 RNA5SP168-201ENST00000516642 112 ntBASIC0.46□□□□□ -2.34
SRP9P49458 RNA5SP481-201ENST00000516814 122 ntBASIC0.46□□□□□ -2.34
SRP9P49458 RNU6-165P-201ENST00000517170 99 ntBASIC0.46□□□□□ -2.34
SRP9P49458 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.46□□□□□ -2.34
SRP9P49458 AC091163.3-201ENST00000518269 1144 ntBASIC0.46□□□□□ -2.34
SRP9P49458 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.46□□□□□ -2.34
SRP9P49458 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.46□□□□□ -2.34
SRP9P49458 AL157871.3-201ENST00000557231 293 ntBASIC0.46□□□□□ -2.34
SRP9P49458 SNORA4-201ENST00000584302 138 ntBASIC0.46□□□□□ -2.34
SRP9P49458 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.46□□□□□ -2.34
SRP9P49458 MIR3976-201ENST00000606807 139 ntBASIC0.46□□□□□ -2.34
SRP9P49458 RNU6-87P-201ENST00000607561 108 ntBASIC0.46□□□□□ -2.34
SRP9P49458 AL355816.2-201ENST00000610049 647 ntBASIC0.46□□□□□ -2.34
SRP9P49458 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.46□□□□□ -2.34
SRP9P49458 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.46□□□□□ -2.34
SRP9P49458 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
SRP9P49458 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.46□□□□□ -2.34
SRP9P49458 AC068700.1-201ENST00000565862 3754 ntBASIC0.46□□□□□ -2.34
SRP9P49458 OR4G2P-201ENST00000328113 903 ntBASIC0.45□□□□□ -2.34
SRP9P49458 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
SRP9P49458 RNU6-862P-201ENST00000362804 105 ntBASIC0.45□□□□□ -2.34
SRP9P49458 Y_RNA.122-201ENST00000363331 96 ntBASIC0.45□□□□□ -2.34
SRP9P49458 RNU6-1284P-201ENST00000363701 100 ntBASIC0.45□□□□□ -2.34
SRP9P49458 RNU6-777P-201ENST00000364265 104 ntBASIC0.45□□□□□ -2.34
SRP9P49458 RNA5SP259-201ENST00000365541 109 ntBASIC0.45□□□□□ -2.34
SRP9P49458 RNU6-1235P-201ENST00000384559 107 ntBASIC0.45□□□□□ -2.34
SRP9P49458 Y_RNA.534-201ENST00000384599 112 ntBASIC0.45□□□□□ -2.34
SRP9P49458 RNU6-817P-201ENST00000391083 104 ntBASIC0.45□□□□□ -2.34
SRP9P49458 AL365338.1-201ENST00000422282 858 ntBASIC0.45□□□□□ -2.34
SRP9P49458 AL590556.1-201ENST00000423231 483 ntBASIC0.45□□□□□ -2.34
SRP9P49458 CETN4P-201ENST00000432407 469 ntBASIC0.45□□□□□ -2.34
SRP9P49458 SNRPEP8-201ENST00000442866 260 ntBASIC0.45□□□□□ -2.34
SRP9P49458 EEF1E1P1-201ENST00000446998 430 ntBASIC0.45□□□□□ -2.34
SRP9P49458 TPRKBP1-201ENST00000456243 481 ntBASIC0.45□□□□□ -2.34
SRP9P49458 RNU6-498P-201ENST00000459468 107 ntBASIC0.45□□□□□ -2.34
SRP9P49458 RNU4-54P-201ENST00000516428 129 ntBASIC0.45□□□□□ -2.34
SRP9P49458 RNA5SP121-201ENST00000516537 101 ntBASIC0.45□□□□□ -2.34
SRP9P49458 AC104417.1-201ENST00000523974 751 ntBASIC0.45□□□□□ -2.34
SRP9P49458 DEFB131D-201ENST00000526803 184 ntBASIC0.45□□□□□ -2.34
SRP9P49458 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.45□□□□□ -2.34
SRP9P49458 AC016957.1-201ENST00000534895 309 ntBASIC0.45□□□□□ -2.34
SRP9P49458 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.45□□□□□ -2.34
SRP9P49458 AC107304.1-201ENST00000604229 296 ntBASIC0.45□□□□□ -2.34
SRP9P49458 AC090186.1-201ENST00000605991 572 ntBASIC0.45□□□□□ -2.34
SRP9P49458 AC007792.1-201ENST00000623023 402 ntBASIC0.45□□□□□ -2.34
SRP9P49458 PCMTD1P7-201ENST00000634506 357 ntBASIC0.45□□□□□ -2.34
SRP9P49458 Y_RNA.33-201ENST00000362591 102 ntBASIC0.44□□□□□ -2.34
SRP9P49458 RNA5SP361-201ENST00000362686 118 ntBASIC0.44□□□□□ -2.34
SRP9P49458 SNORD3E-201ENST00000362899 217 ntBASIC0.44□□□□□ -2.34
SRP9P49458 Y_RNA.124-201ENST00000363339 93 ntBASIC0.44□□□□□ -2.34
SRP9P49458 SNORA12-201ENST00000391162 147 ntBASIC0.44□□□□□ -2.34
SRP9P49458 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.44□□□□□ -2.34
SRP9P49458 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.44□□□□□ -2.34
SRP9P49458 RPS3AP1-201ENST00000413190 320 ntBASIC0.44□□□□□ -2.34
SRP9P49458 AC123900.1-201ENST00000420390 96 ntBASIC0.44□□□□□ -2.34
SRP9P49458 MRPS36P1-201ENST00000421291 307 ntBASIC0.44□□□□□ -2.34
SRP9P49458 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.44□□□□□ -2.34
SRP9P49458 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.44□□□□□ -2.34
SRP9P49458 MTND1P30-201ENST00000441241 901 ntBASIC0.44□□□□□ -2.34
SRP9P49458 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.44□□□□□ -2.34
SRP9P49458 RNU6-953P-201ENST00000459154 107 ntBASIC0.44□□□□□ -2.34
SRP9P49458 snoU13.27-201ENST00000459278 104 ntBASIC0.44□□□□□ -2.34
SRP9P49458 RPS26P45-201ENST00000471748 340 ntBASIC0.44□□□□□ -2.34
SRP9P49458 MTND1P3-201ENST00000484956 952 ntBASIC0.44□□□□□ -2.34
SRP9P49458 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.44□□□□□ -2.34
SRP9P49458 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.44□□□□□ -2.34
SRP9P49458 BNIP3P16-201ENST00000589779 534 ntBASIC0.44□□□□□ -2.34
SRP9P49458 AC009229.3-201ENST00000608056 282 ntBASIC0.44□□□□□ -2.34
SRP9P49458 AC097460.3-201ENST00000623099 442 ntBASIC0.44□□□□□ -2.34
SRP9P49458 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.44□□□□□ -2.34
SRP9P49458 RNU1-133P-201ENST00000364867 167 ntBASIC0.43□□□□□ -2.34
SRP9P49458 RNU6-354P-201ENST00000383862 107 ntBASIC0.43□□□□□ -2.34
SRP9P49458 RNU6-610P-201ENST00000384264 107 ntBASIC0.43□□□□□ -2.34
SRP9P49458 RNU6-72P-201ENST00000384285 79 ntBASIC0.43□□□□□ -2.34
SRP9P49458 RNU6-910P-201ENST00000390844 107 ntBASIC0.43□□□□□ -2.34
SRP9P49458 RNA5SP390-201ENST00000410191 113 ntBASIC0.43□□□□□ -2.34
SRP9P49458 MTCYBP5-201ENST00000423752 1135 ntBASIC0.43□□□□□ -2.34
SRP9P49458 AL591704.1-201ENST00000432574 275 ntBASIC0.43□□□□□ -2.34
SRP9P49458 AC092628.1-201ENST00000436250 252 ntBASIC0.43□□□□□ -2.34
SRP9P49458 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.43□□□□□ -2.34
SRP9P49458 LARP1BP3-201ENST00000437229 869 ntBASIC0.43□□□□□ -2.34
SRP9P49458 ZNF886P-201ENST00000450781 723 ntBASIC0.43□□□□□ -2.34
SRP9P49458 AL122001.1-201ENST00000457027 370 ntBASIC0.43□□□□□ -2.34
SRP9P49458 COX6CP6-201ENST00000490840 228 ntBASIC0.43□□□□□ -2.34
SRP9P49458 AC079140.3-201ENST00000511111 550 ntBASIC0.43□□□□□ -2.34
SRP9P49458 RNU6-914P-201ENST00000516749 109 ntBASIC0.43□□□□□ -2.34
SRP9P49458 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.43□□□□□ -2.34
SRP9P49458 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.43□□□□□ -2.34
SRP9P49458 MIR1273C-201ENST00000578669 77 ntBASIC0.43□□□□□ -2.34
SRP9P49458 AC022432.1-201ENST00000595739 310 ntBASIC0.43□□□□□ -2.34
SRP9P49458 AC105129.3-201ENST00000605455 485 ntBASIC0.43□□□□□ -2.34
SRP9P49458 RMST_2.1-201ENST00000617263 136 ntBASIC0.43□□□□□ -2.34
SRP9P49458 AL159153.1-201ENST00000619688 317 ntBASIC0.43□□□□□ -2.34
SRP9P49458 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.43□□□□□ -2.34
SRP9P49458 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
SRP9P49458 MTND5P33-201ENST00000571250 1450 ntBASIC0.42□□□□□ -2.34
SRP9P49458 SNORA63D-201ENST00000364359 132 ntBASIC0.42□□□□□ -2.34
SRP9P49458 RNU4-12P-201ENST00000365233 139 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms