Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC104581.2-201ENST00000572227 430 ntBASIC2.78□□□□□ -1.96
SOX2P48431 AC136443.5-201ENST00000603741 370 ntBASIC2.78□□□□□ -1.96
SOX2P48431 AC096772.1-201ENST00000609146 564 ntBASIC2.78□□□□□ -1.96
SOX2P48431 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.78□□□□□ -1.96
SOX2P48431 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.78□□□□□ -1.96
SOX2P48431 AC007792.1-201ENST00000623023 402 ntBASIC2.78□□□□□ -1.96
SOX2P48431 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.78□□□□□ -1.96
SOX2P48431 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SOX2P48431 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
SOX2P48431 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
SOX2P48431 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.77□□□□□ -1.97
SOX2P48431 GABRG2-229ENST00000641017 3628 ntBASIC2.77□□□□□ -1.97
SOX2P48431 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.77□□□□□ -1.97
SOX2P48431 CD24P4-201ENST00000382840 243 ntBASIC2.77□□□□□ -1.97
SOX2P48431 AL133475.1-201ENST00000404414 305 ntBASIC2.77□□□□□ -1.97
SOX2P48431 RN7SKP61-201ENST00000410642 295 ntBASIC2.77□□□□□ -1.97
SOX2P48431 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.77□□□□□ -1.97
SOX2P48431 AL358453.1-201ENST00000422522 250 ntBASIC2.77□□□□□ -1.97
SOX2P48431 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.77□□□□□ -1.97
SOX2P48431 AC078809.1-201ENST00000427601 140 ntBASIC2.77□□□□□ -1.97
SOX2P48431 MTCO3P29-201ENST00000432119 779 ntBASIC2.77□□□□□ -1.97
SOX2P48431 GPM6BP3-201ENST00000442797 145 ntBASIC2.77□□□□□ -1.97
SOX2P48431 AL353752.1-201ENST00000454946 260 ntBASIC2.77□□□□□ -1.97
SOX2P48431 MTND5P22-201ENST00000458380 195 ntBASIC2.77□□□□□ -1.97
SOX2P48431 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SOX2P48431 RN7SL283P-201ENST00000489055 303 ntBASIC2.77□□□□□ -1.97
SOX2P48431 RPS27P26-201ENST00000494583 239 ntBASIC2.77□□□□□ -1.97
SOX2P48431 AC021146.2-201ENST00000504736 556 ntBASIC2.77□□□□□ -1.97
SOX2P48431 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.77□□□□□ -1.97
SOX2P48431 Y_RNA.706-201ENST00000516933 99 ntBASIC2.77□□□□□ -1.97
SOX2P48431 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.77□□□□□ -1.97
SOX2P48431 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.77□□□□□ -1.97
SOX2P48431 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.77□□□□□ -1.97
SOX2P48431 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.77□□□□□ -1.97
SOX2P48431 AC100812.1-201ENST00000607622 580 ntBASIC2.77□□□□□ -1.97
SOX2P48431 uc_338.25-201ENST00000613756 156 ntBASIC2.77□□□□□ -1.97
SOX2P48431 AL162373.1-201ENST00000620433 407 ntBASIC2.77□□□□□ -1.97
SOX2P48431 SCARNA4-201ENST00000629045 128 ntBASIC2.77□□□□□ -1.97
SOX2P48431 MIR4272-201ENST00000635924 64 ntBASIC2.77□□□□□ -1.97
SOX2P48431 AL034408.1-202ENST00000636088 415 ntBASIC2.77□□□□□ -1.97
SOX2P48431 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SOX2P48431 AC002543.1-201ENST00000299783 1954 ntBASIC2.77□□□□□ -1.97
SOX2P48431 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SOX2P48431 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.76□□□□□ -1.97
SOX2P48431 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SOX2P48431 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
SOX2P48431 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
SOX2P48431 AC108206.1-201ENST00000570186 4159 ntBASIC2.76□□□□□ -1.97
SOX2P48431 Y_RNA.126-201ENST00000363382 111 ntBASIC2.76□□□□□ -1.97
SOX2P48431 DYNLT3P1-201ENST00000378574 347 ntBASIC2.76□□□□□ -1.97
SOX2P48431 Y_RNA.405-201ENST00000383979 100 ntBASIC2.76□□□□□ -1.97
SOX2P48431 Y_RNA.424-201ENST00000384063 103 ntBASIC2.76□□□□□ -1.97
SOX2P48431 Y_RNA.451-201ENST00000384200 100 ntBASIC2.76□□□□□ -1.97
SOX2P48431 Y_RNA.485-201ENST00000384395 102 ntBASIC2.76□□□□□ -1.97
SOX2P48431 Y_RNA.524-201ENST00000384564 100 ntBASIC2.76□□□□□ -1.97
SOX2P48431 Y_RNA.527-201ENST00000384573 102 ntBASIC2.76□□□□□ -1.97
SOX2P48431 Y_RNA.561-201ENST00000384694 100 ntBASIC2.76□□□□□ -1.97
SOX2P48431 SNORA69.1-201ENST00000390904 137 ntBASIC2.76□□□□□ -1.97
SOX2P48431 AC138623.1-201ENST00000418060 216 ntBASIC2.76□□□□□ -1.97
SOX2P48431 AC244670.1-201ENST00000436879 112 ntBASIC2.76□□□□□ -1.97
SOX2P48431 AC004383.1-201ENST00000438135 289 ntBASIC2.76□□□□□ -1.97
SOX2P48431 snoU13.30-201ENST00000458951 104 ntBASIC2.76□□□□□ -1.97
SOX2P48431 RNU7-169P-201ENST00000459456 61 ntBASIC2.76□□□□□ -1.97
SOX2P48431 RPL23AP75-201ENST00000491601 451 ntBASIC2.76□□□□□ -1.97
SOX2P48431 RNU6-764P-201ENST00000516396 105 ntBASIC2.76□□□□□ -1.97
SOX2P48431 Y_RNA.721-201ENST00000517207 102 ntBASIC2.76□□□□□ -1.97
SOX2P48431 AC115990.1-201ENST00000526957 301 ntBASIC2.76□□□□□ -1.97
SOX2P48431 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.76□□□□□ -1.97
SOX2P48431 RPS15AP11-201ENST00000594193 385 ntBASIC2.76□□□□□ -1.97
SOX2P48431 RPL23AP78-201ENST00000599928 470 ntBASIC2.76□□□□□ -1.97
SOX2P48431 RPL23AP88-201ENST00000605759 454 ntBASIC2.76□□□□□ -1.97
SOX2P48431 SNORD58B-201ENST00000607313 66 ntBASIC2.76□□□□□ -1.97
SOX2P48431 AC087588.2-201ENST00000617667 426 ntBASIC2.76□□□□□ -1.97
SOX2P48431 SNORA43.4-201ENST00000629559 138 ntBASIC2.76□□□□□ -1.97
SOX2P48431 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.76□□□□□ -1.97
SOX2P48431 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SOX2P48431 AL353743.1-202ENST00000431724 1695 ntBASIC2.76□□□□□ -1.97
SOX2P48431 AC091812.1-201ENST00000432235 1948 ntBASIC2.76□□□□□ -1.97
SOX2P48431 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.76□□□□□ -1.97
SOX2P48431 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
SOX2P48431 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.75□□□□□ -1.97
SOX2P48431 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SOX2P48431 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
SOX2P48431 AC092268.1-201ENST00000342691 405 ntBASIC2.75□□□□□ -1.97
SOX2P48431 RNU6-799P-201ENST00000363567 107 ntBASIC2.75□□□□□ -1.97
SOX2P48431 RNY3P11-201ENST00000364153 102 ntBASIC2.75□□□□□ -1.97
SOX2P48431 Y_RNA.389-201ENST00000383924 113 ntBASIC2.75□□□□□ -1.97
SOX2P48431 SNORA29-201ENST00000384183 140 ntBASIC2.75□□□□□ -1.97
SOX2P48431 Y_RNA.645-201ENST00000391229 102 ntBASIC2.75□□□□□ -1.97
SOX2P48431 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
SOX2P48431 MIR190B-201ENST00000401119 79 ntBASIC2.75□□□□□ -1.97
SOX2P48431 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.75□□□□□ -1.97
SOX2P48431 RNU6-1140P-201ENST00000410517 106 ntBASIC2.75□□□□□ -1.97
SOX2P48431 RN7SKP27-201ENST00000410684 333 ntBASIC2.75□□□□□ -1.97
SOX2P48431 AC096644.2-201ENST00000429278 159 ntBASIC2.75□□□□□ -1.97
SOX2P48431 AC009296.1-201ENST00000443146 155 ntBASIC2.75□□□□□ -1.97
SOX2P48431 OSTCP8-201ENST00000445117 448 ntBASIC2.75□□□□□ -1.97
SOX2P48431 AC112492.4-201ENST00000456549 352 ntBASIC2.75□□□□□ -1.97
SOX2P48431 RPL30P1-201ENST00000488676 339 ntBASIC2.75□□□□□ -1.97
SOX2P48431 AC093663.1-201ENST00000497190 394 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms