Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.46□□□□□ -2.18
BRCA1P38398 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.46□□□□□ -2.18
BRCA1P38398 AC022960.3-201ENST00000619794 441 ntBASIC1.46□□□□□ -2.18
BRCA1P38398 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
BRCA1P38398 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
BRCA1P38398 SNORD3E-201ENST00000362899 217 ntBASIC1.46□□□□□ -2.18
BRCA1P38398 MIR1-2-201ENST00000384961 85 ntBASIC1.46□□□□□ -2.18
BRCA1P38398 MIR934-201ENST00000401241 83 ntBASIC1.46□□□□□ -2.18
BRCA1P38398 Y_RNA.597-201ENST00000410463 100 ntBASIC1.46□□□□□ -2.18
BRCA1P38398 AL008987.1-201ENST00000415528 237 ntBASIC1.46□□□□□ -2.18
BRCA1P38398 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.46□□□□□ -2.18
BRCA1P38398 MTND5P25-201ENST00000430499 799 ntBASIC1.46□□□□□ -2.18
BRCA1P38398 AL360221.1-201ENST00000445989 335 ntBASIC1.46□□□□□ -2.18
BRCA1P38398 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.46□□□□□ -2.18
BRCA1P38398 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.46□□□□□ -2.18
BRCA1P38398 PTP4A1P4-201ENST00000512479 322 ntBASIC1.46□□□□□ -2.18
BRCA1P38398 AC112206.3-201ENST00000514578 389 ntBASIC1.46□□□□□ -2.18
BRCA1P38398 MIR4714-201ENST00000580728 77 ntBASIC1.46□□□□□ -2.18
BRCA1P38398 RN7SL793P-201ENST00000583259 296 ntBASIC1.46□□□□□ -2.18
BRCA1P38398 VN1R107P-201ENST00000601784 209 ntBASIC1.46□□□□□ -2.18
BRCA1P38398 AC012065.4-201ENST00000602445 679 ntBASIC1.46□□□□□ -2.18
BRCA1P38398 CYP2C61P-201ENST00000604072 290 ntBASIC1.46□□□□□ -2.18
BRCA1P38398 NDUFA8P1-201ENST00000605525 367 ntBASIC1.46□□□□□ -2.18
BRCA1P38398 AC012409.4-201ENST00000612923 249 ntBASIC1.46□□□□□ -2.18
BRCA1P38398 AC122133.1-201ENST00000613964 233 ntBASIC1.46□□□□□ -2.18
BRCA1P38398 AL078595.3-201ENST00000623815 1166 ntBASIC1.46□□□□□ -2.18
BRCA1P38398 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.46□□□□□ -2.18
BRCA1P38398 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
BRCA1P38398 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
BRCA1P38398 RBBP8P1-201ENST00000449447 1844 ntBASIC1.45□□□□□ -2.18
BRCA1P38398 RNU6-527P-201ENST00000363425 104 ntBASIC1.45□□□□□ -2.18
BRCA1P38398 RNU6-843P-201ENST00000384454 104 ntBASIC1.45□□□□□ -2.18
BRCA1P38398 RNU6-1222P-201ENST00000384615 107 ntBASIC1.45□□□□□ -2.18
BRCA1P38398 RNU6-360P-201ENST00000390944 104 ntBASIC1.45□□□□□ -2.18
BRCA1P38398 RN7SKP51-201ENST00000410781 304 ntBASIC1.45□□□□□ -2.18
BRCA1P38398 RNU6-1245P-201ENST00000411130 106 ntBASIC1.45□□□□□ -2.18
BRCA1P38398 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.45□□□□□ -2.18
BRCA1P38398 AL033528.1-201ENST00000453780 140 ntBASIC1.45□□□□□ -2.18
BRCA1P38398 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.45□□□□□ -2.18
BRCA1P38398 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.45□□□□□ -2.18
BRCA1P38398 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.45□□□□□ -2.18
BRCA1P38398 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.45□□□□□ -2.18
BRCA1P38398 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.45□□□□□ -2.18
BRCA1P38398 Y_RNA.324-201ENST00000365165 102 ntBASIC1.44□□□□□ -2.18
BRCA1P38398 SNORA75B-201ENST00000384053 137 ntBASIC1.44□□□□□ -2.18
BRCA1P38398 RNU6-611P-201ENST00000384276 104 ntBASIC1.44□□□□□ -2.18
BRCA1P38398 RNU6-1179P-201ENST00000384667 107 ntBASIC1.44□□□□□ -2.18
BRCA1P38398 MIR544A-201ENST00000384855 91 ntBASIC1.44□□□□□ -2.18
BRCA1P38398 OR51A5P-201ENST00000415429 942 ntBASIC1.44□□□□□ -2.18
BRCA1P38398 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.44□□□□□ -2.18
BRCA1P38398 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.44□□□□□ -2.18
BRCA1P38398 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.44□□□□□ -2.18
BRCA1P38398 DUXAP8-207ENST00000456786 622 ntBASIC1.44□□□□□ -2.18
BRCA1P38398 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.44□□□□□ -2.18
BRCA1P38398 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.44□□□□□ -2.18
BRCA1P38398 AC104136.1-201ENST00000512969 394 ntBASIC1.44□□□□□ -2.18
BRCA1P38398 RNA5SP384-201ENST00000516615 116 ntBASIC1.44□□□□□ -2.18
BRCA1P38398 CYCSP27-201ENST00000527643 293 ntBASIC1.44□□□□□ -2.18
BRCA1P38398 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.44□□□□□ -2.18
BRCA1P38398 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.44□□□□□ -2.18
BRCA1P38398 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.44□□□□□ -2.18
BRCA1P38398 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.44□□□□□ -2.18
BRCA1P38398 AC016597.2-201ENST00000613256 341 ntBASIC1.44□□□□□ -2.18
BRCA1P38398 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
BRCA1P38398 MIR7974-201ENST00000615835 79 ntBASIC1.44□□□□□ -2.18
BRCA1P38398 U1.36-201ENST00000620684 176 ntBASIC1.44□□□□□ -2.18
BRCA1P38398 AC092192.1-201ENST00000633154 1018 ntBASIC1.44□□□□□ -2.18
BRCA1P38398 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.44□□□□□ -2.18
BRCA1P38398 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
BRCA1P38398 RNU6-108P-201ENST00000365558 107 ntBASIC1.43□□□□□ -2.18
BRCA1P38398 AL133475.1-201ENST00000404414 305 ntBASIC1.43□□□□□ -2.18
BRCA1P38398 MIR1262-201ENST00000408276 93 ntBASIC1.43□□□□□ -2.18
BRCA1P38398 AC244636.1-201ENST00000421152 228 ntBASIC1.43□□□□□ -2.18
BRCA1P38398 AC119618.1-201ENST00000434191 222 ntBASIC1.43□□□□□ -2.18
BRCA1P38398 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.43□□□□□ -2.18
BRCA1P38398 AL353752.1-201ENST00000454946 260 ntBASIC1.43□□□□□ -2.18
BRCA1P38398 SNORD42A-201ENST00000459584 64 ntBASIC1.43□□□□□ -2.18
BRCA1P38398 AC079140.5-201ENST00000507882 310 ntBASIC1.43□□□□□ -2.18
BRCA1P38398 MTCYBP40-201ENST00000509390 1135 ntBASIC1.43□□□□□ -2.18
BRCA1P38398 AC093259.1-201ENST00000509755 300 ntBASIC1.43□□□□□ -2.18
BRCA1P38398 AC074344.1-201ENST00000512823 224 ntBASIC1.43□□□□□ -2.18
BRCA1P38398 DEFB131E-202ENST00000602581 683 ntBASIC1.43□□□□□ -2.18
BRCA1P38398 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.43□□□□□ -2.18
BRCA1P38398 AP000648.3-201ENST00000623539 4507 ntBASIC1.43□□□□□ -2.18
BRCA1P38398 RNA5SP276-201ENST00000362580 94 ntBASIC1.43□□□□□ -2.18
BRCA1P38398 SNORA25B-201ENST00000365507 128 ntBASIC1.43□□□□□ -2.18
BRCA1P38398 Y_RNA.560-201ENST00000384689 102 ntBASIC1.43□□□□□ -2.18
BRCA1P38398 MIR518A2-201ENST00000384966 87 ntBASIC1.43□□□□□ -2.18
BRCA1P38398 RPS3AP36-201ENST00000398190 775 ntBASIC1.43□□□□□ -2.18
BRCA1P38398 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.43□□□□□ -2.18
BRCA1P38398 AC007283.2-201ENST00000424739 197 ntBASIC1.43□□□□□ -2.18
BRCA1P38398 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.43□□□□□ -2.18
BRCA1P38398 AL591043.1-201ENST00000432461 424 ntBASIC1.43□□□□□ -2.18
BRCA1P38398 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.43□□□□□ -2.18
BRCA1P38398 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.43□□□□□ -2.18
BRCA1P38398 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.43□□□□□ -2.18
BRCA1P38398 RNU6-965P-201ENST00000516721 96 ntBASIC1.43□□□□□ -2.18
BRCA1P38398 AC090572.1-201ENST00000519251 160 ntBASIC1.43□□□□□ -2.18
BRCA1P38398 AP003181.2-201ENST00000528941 181 ntBASIC1.43□□□□□ -2.18
BRCA1P38398 OR5B19P-201ENST00000531766 928 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms