Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC008716.1-201ENST00000511084 513 ntBASIC3.3□□□□□ -1.88
POLR2AP24928 RNU1-86P-201ENST00000516108 154 ntBASIC3.3□□□□□ -1.88
POLR2AP24928 Y_RNA.687-201ENST00000516558 91 ntBASIC3.3□□□□□ -1.88
POLR2AP24928 RNU1-107P-201ENST00000516617 154 ntBASIC3.3□□□□□ -1.88
POLR2AP24928 RNU6-914P-201ENST00000516749 109 ntBASIC3.3□□□□□ -1.88
POLR2AP24928 RNU6-143P-201ENST00000516942 93 ntBASIC3.3□□□□□ -1.88
POLR2AP24928 SNORD116.3-201ENST00000517176 78 ntBASIC3.3□□□□□ -1.88
POLR2AP24928 AP002770.2-201ENST00000543613 532 ntBASIC3.3□□□□□ -1.88
POLR2AP24928 MIR4273-201ENST00000582824 84 ntBASIC3.3□□□□□ -1.88
POLR2AP24928 AC008962.1-201ENST00000605729 304 ntBASIC3.3□□□□□ -1.88
POLR2AP24928 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.3□□□□□ -1.88
POLR2AP24928 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
POLR2AP24928 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
POLR2AP24928 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
POLR2AP24928 Y_RNA.64-201ENST00000362845 102 ntBASIC3.29□□□□□ -1.88
POLR2AP24928 RNU6-166P-201ENST00000384371 107 ntBASIC3.29□□□□□ -1.88
POLR2AP24928 MIR578-201ENST00000384828 96 ntBASIC3.29□□□□□ -1.88
POLR2AP24928 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.29□□□□□ -1.88
POLR2AP24928 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.29□□□□□ -1.88
POLR2AP24928 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.29□□□□□ -1.88
POLR2AP24928 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.29□□□□□ -1.88
POLR2AP24928 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
POLR2AP24928 AC107016.2-201ENST00000547968 190 ntBASIC3.29□□□□□ -1.88
POLR2AP24928 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.29□□□□□ -1.88
POLR2AP24928 SNRPGP15-201ENST00000600149 222 ntBASIC3.29□□□□□ -1.88
POLR2AP24928 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.29□□□□□ -1.88
POLR2AP24928 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
POLR2AP24928 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
POLR2AP24928 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
POLR2AP24928 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
POLR2AP24928 Y_RNA.276-201ENST00000364732 109 ntBASIC3.29□□□□□ -1.88
POLR2AP24928 U3.13-201ENST00000364804 214 ntBASIC3.29□□□□□ -1.88
POLR2AP24928 RNU5E-7P-201ENST00000365290 117 ntBASIC3.29□□□□□ -1.88
POLR2AP24928 Y_RNA.541-201ENST00000384640 113 ntBASIC3.29□□□□□ -1.88
POLR2AP24928 RNA5SP508-201ENST00000411327 119 ntBASIC3.29□□□□□ -1.88
POLR2AP24928 SNORD56-201ENST00000413522 71 ntBASIC3.29□□□□□ -1.88
POLR2AP24928 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
POLR2AP24928 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.29□□□□□ -1.88
POLR2AP24928 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.29□□□□□ -1.88
POLR2AP24928 snoU13.30-201ENST00000458951 104 ntBASIC3.29□□□□□ -1.88
POLR2AP24928 TRBVB-201ENST00000477100 408 ntBASIC3.29□□□□□ -1.88
POLR2AP24928 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.29□□□□□ -1.88
POLR2AP24928 MTND1P19-201ENST00000511780 315 ntBASIC3.29□□□□□ -1.88
POLR2AP24928 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.29□□□□□ -1.88
POLR2AP24928 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.29□□□□□ -1.88
POLR2AP24928 RNU4-71P-201ENST00000516258 113 ntBASIC3.29□□□□□ -1.88
POLR2AP24928 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.29□□□□□ -1.88
POLR2AP24928 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.29□□□□□ -1.88
POLR2AP24928 AC006023.2-201ENST00000609916 167 ntBASIC3.29□□□□□ -1.88
POLR2AP24928 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
POLR2AP24928 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
POLR2AP24928 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
POLR2AP24928 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
POLR2AP24928 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.28□□□□□ -1.88
POLR2AP24928 RNU6-770P-201ENST00000363929 105 ntBASIC3.28□□□□□ -1.88
POLR2AP24928 SNORD114-30-201ENST00000364448 72 ntBASIC3.28□□□□□ -1.88
POLR2AP24928 Y_RNA.552-201ENST00000384665 112 ntBASIC3.28□□□□□ -1.88
POLR2AP24928 MIR512-1-201ENST00000384913 84 ntBASIC3.28□□□□□ -1.88
POLR2AP24928 Y_RNA.623-201ENST00000411128 95 ntBASIC3.28□□□□□ -1.88
POLR2AP24928 RN7SKP192-201ENST00000411291 327 ntBASIC3.28□□□□□ -1.88
POLR2AP24928 SDAD1P3-201ENST00000427380 333 ntBASIC3.28□□□□□ -1.88
POLR2AP24928 SUMO1P3-201ENST00000439961 304 ntBASIC3.28□□□□□ -1.88
POLR2AP24928 RNU7-169P-201ENST00000459456 61 ntBASIC3.28□□□□□ -1.88
POLR2AP24928 RPL39P38-201ENST00000467018 153 ntBASIC3.28□□□□□ -1.88
POLR2AP24928 MLLT10P2-201ENST00000506434 249 ntBASIC3.28□□□□□ -1.88
POLR2AP24928 RNU6-897P-201ENST00000517135 105 ntBASIC3.28□□□□□ -1.88
POLR2AP24928 AC123912.5-201ENST00000605470 343 ntBASIC3.28□□□□□ -1.88
POLR2AP24928 AC006065.5-201ENST00000623427 349 ntBASIC3.28□□□□□ -1.88
POLR2AP24928 CTSLP2-204ENST00000629029 392 ntBASIC3.28□□□□□ -1.88
POLR2AP24928 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
POLR2AP24928 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
POLR2AP24928 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
POLR2AP24928 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
POLR2AP24928 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
POLR2AP24928 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.27□□□□□ -1.89
POLR2AP24928 AC008725.1-201ENST00000605123 2263 ntBASIC3.27□□□□□ -1.89
POLR2AP24928 MTND5P6-201ENST00000422338 1798 ntBASIC3.27□□□□□ -1.89
POLR2AP24928 MIR592-201ENST00000384959 97 ntBASIC3.27□□□□□ -1.89
POLR2AP24928 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
POLR2AP24928 MTCYBP2-201ENST00000407745 171 ntBASIC3.27□□□□□ -1.89
POLR2AP24928 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.27□□□□□ -1.89
POLR2AP24928 AL359273.1-201ENST00000510918 627 ntBASIC3.27□□□□□ -1.89
POLR2AP24928 RNU6-406P-201ENST00000516470 107 ntBASIC3.27□□□□□ -1.89
POLR2AP24928 AC022868.1-201ENST00000517767 391 ntBASIC3.27□□□□□ -1.89
POLR2AP24928 AL590705.4-201ENST00000532209 134 ntBASIC3.27□□□□□ -1.89
POLR2AP24928 AC103996.1-201ENST00000555468 102 ntBASIC3.27□□□□□ -1.89
POLR2AP24928 RAC1P9-201ENST00000604990 392 ntBASIC3.27□□□□□ -1.89
POLR2AP24928 AL121917.1-203ENST00000605534 577 ntBASIC3.27□□□□□ -1.89
POLR2AP24928 AL450472.1-202ENST00000637286 180 ntBASIC3.27□□□□□ -1.89
POLR2AP24928 AL049555.1-201ENST00000562834 1933 ntBASIC3.27□□□□□ -1.89
POLR2AP24928 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
POLR2AP24928 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.27□□□□□ -1.89
POLR2AP24928 Y_RNA.60-201ENST00000362831 98 ntBASIC3.27□□□□□ -1.89
POLR2AP24928 RNU6-700P-201ENST00000391043 107 ntBASIC3.27□□□□□ -1.89
POLR2AP24928 RN7SKP210-201ENST00000459176 261 ntBASIC3.27□□□□□ -1.89
POLR2AP24928 RN7SL330P-201ENST00000469709 307 ntBASIC3.27□□□□□ -1.89
POLR2AP24928 Y_RNA.713-201ENST00000517013 96 ntBASIC3.27□□□□□ -1.89
POLR2AP24928 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.27□□□□□ -1.89
POLR2AP24928 ATP5F1P5-201ENST00000526403 760 ntBASIC3.27□□□□□ -1.89
POLR2AP24928 AC090517.1-201ENST00000569307 266 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms