Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXD8P13378 BTF3P11-201ENST00000426582 477 ntBASIC4.28□□□□□ -1.72
HOXD8P13378 AC112220.1-201ENST00000434628 355 ntBASIC4.28□□□□□ -1.72
HOXD8P13378 AL356535.1-201ENST00000440335 398 ntBASIC4.28□□□□□ -1.72
HOXD8P13378 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXD8P13378 AC140059.1-201ENST00000489238 361 ntBASIC4.28□□□□□ -1.72
HOXD8P13378 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.28□□□□□ -1.72
HOXD8P13378 AC069240.1-201ENST00000548774 375 ntBASIC4.28□□□□□ -1.72
HOXD8P13378 MIR5692C2-201ENST00000577959 77 ntBASIC4.28□□□□□ -1.72
HOXD8P13378 AC011471.1-201ENST00000585766 187 ntBASIC4.28□□□□□ -1.72
HOXD8P13378 AC096577.2-201ENST00000611455 153 ntBASIC4.28□□□□□ -1.72
HOXD8P13378 snoU18.1-201ENST00000629629 71 ntBASIC4.28□□□□□ -1.72
HOXD8P13378 AL049781.1-201ENST00000623195 3585 ntBASIC4.28□□□□□ -1.72
HOXD8P13378 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXD8P13378 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.28□□□□□ -1.72
HOXD8P13378 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXD8P13378 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXD8P13378 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXD8P13378 MTND5P35-201ENST00000557537 1720 ntBASIC4.27□□□□□ -1.73
HOXD8P13378 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXD8P13378 RNU6-1290P-201ENST00000362957 109 ntBASIC4.27□□□□□ -1.73
HOXD8P13378 RNU6-778P-201ENST00000363269 103 ntBASIC4.27□□□□□ -1.73
HOXD8P13378 SNORD115-8-201ENST00000363856 82 ntBASIC4.27□□□□□ -1.73
HOXD8P13378 SNORD115-38-201ENST00000365037 82 ntBASIC4.27□□□□□ -1.73
HOXD8P13378 RNU6-217P-201ENST00000384164 104 ntBASIC4.27□□□□□ -1.73
HOXD8P13378 RNU6-22P-201ENST00000384355 107 ntBASIC4.27□□□□□ -1.73
HOXD8P13378 RNU5E-9P-201ENST00000411164 104 ntBASIC4.27□□□□□ -1.73
HOXD8P13378 AC244670.1-201ENST00000436879 112 ntBASIC4.27□□□□□ -1.73
HOXD8P13378 AC007969.2-201ENST00000441891 191 ntBASIC4.27□□□□□ -1.73
HOXD8P13378 AC010469.1-201ENST00000463864 576 ntBASIC4.27□□□□□ -1.73
HOXD8P13378 RNU6-1282P-201ENST00000516735 96 ntBASIC4.27□□□□□ -1.73
HOXD8P13378 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.27□□□□□ -1.73
HOXD8P13378 CR383656.8-201ENST00000549046 145 ntBASIC4.27□□□□□ -1.73
HOXD8P13378 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.27□□□□□ -1.73
HOXD8P13378 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.27□□□□□ -1.73
HOXD8P13378 MIR6134-201ENST00000617606 109 ntBASIC4.27□□□□□ -1.73
HOXD8P13378 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXD8P13378 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXD8P13378 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HOXD8P13378 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.27□□□□□ -1.73
HOXD8P13378 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
HOXD8P13378 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXD8P13378 AC110491.1-201ENST00000562191 2010 ntBASIC4.26□□□□□ -1.73
HOXD8P13378 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.26□□□□□ -1.73
HOXD8P13378 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.26□□□□□ -1.73
HOXD8P13378 RNU6-600P-201ENST00000362524 99 ntBASIC4.26□□□□□ -1.73
HOXD8P13378 RN7SKP61-201ENST00000410642 295 ntBASIC4.26□□□□□ -1.73
HOXD8P13378 NDUFB4P6-201ENST00000436819 366 ntBASIC4.26□□□□□ -1.73
HOXD8P13378 RPL31P61-201ENST00000496160 376 ntBASIC4.26□□□□□ -1.73
HOXD8P13378 RNU6-191P-201ENST00000516295 94 ntBASIC4.26□□□□□ -1.73
HOXD8P13378 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.26□□□□□ -1.73
HOXD8P13378 CYCSP23-201ENST00000519781 313 ntBASIC4.26□□□□□ -1.73
HOXD8P13378 AC018448.1-201ENST00000552843 316 ntBASIC4.26□□□□□ -1.73
HOXD8P13378 AC233702.2-202ENST00000562547 291 ntBASIC4.26□□□□□ -1.73
HOXD8P13378 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
HOXD8P13378 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HOXD8P13378 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HOXD8P13378 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HOXD8P13378 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXD8P13378 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXD8P13378 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HOXD8P13378 RNU6-50P-201ENST00000362356 103 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 RNU6-1285P-201ENST00000363480 105 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 MIR186-201ENST00000384988 86 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 RNU6-1248P-201ENST00000391096 64 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXD8P13378 AL512633.1-201ENST00000399931 655 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 RNU2-2P-201ENST00000410396 191 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 ATP5A1P2-201ENST00000412323 255 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 AL035423.1-201ENST00000420331 213 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 IFNA11P-201ENST00000446352 526 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 ADAM3A-203ENST00000461344 2157 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 RPL30P12-201ENST00000474666 353 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 AL121594.1-201ENST00000475906 575 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 AL049830.2-201ENST00000480072 201 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 AC106707.2-201ENST00000484182 374 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXD8P13378 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.25□□□□□ -1.73
HOXD8P13378 RNU6-479P-201ENST00000516348 105 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXD8P13378 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HOXD8P13378 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXD8P13378 AC055872.1-201ENST00000570978 278 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 RNU2-4P-201ENST00000606190 192 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 U2.15-201ENST00000611544 191 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 U2.16-201ENST00000613119 191 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 U2.12-201ENST00000613778 191 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXD8P13378 U2.9-201ENST00000615427 191 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 U2.11-201ENST00000616345 191 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 U2.2-201ENST00000616535 191 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 U2.3-201ENST00000617785 191 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 U2.19-201ENST00000618602 191 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 RNU2-1-201ENST00000618664 191 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
HOXD8P13378 U2.6-201ENST00000619225 191 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 U2.5-201ENST00000619465 191 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 U2.10-201ENST00000620268 191 ntBASIC4.25□□□□□ -1.73
HOXD8P13378 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms