Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.22□□□□□ -2.21
COL11A1P12107 MIR548AB-201ENST00000584917 84 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 AC110760.3-201ENST00000598794 467 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 AL109918.3-201ENST00000603072 338 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 MIR15A-201ENST00000607334 83 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 AC130324.3-201ENST00000614165 542 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 AC011155.2-201ENST00000623202 216 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 AC092656.1-203ENST00000624134 423 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 AC009161.2-201ENST00000624626 138 ntBASIC1.22□□□□□ -2.21
COL11A1P12107 ZNF702P-202ENST00000434269 1966 ntBASIC1.21□□□□□ -2.22
COL11A1P12107 RNU6-960P-201ENST00000364056 120 ntBASIC1.21□□□□□ -2.22
COL11A1P12107 MIR150-201ENST00000385048 84 ntBASIC1.21□□□□□ -2.22
COL11A1P12107 RPL23AP30-201ENST00000432419 501 ntBASIC1.21□□□□□ -2.22
COL11A1P12107 GPR143P-201ENST00000434155 205 ntBASIC1.21□□□□□ -2.22
COL11A1P12107 MTCYBP1-201ENST00000454315 1119 ntBASIC1.21□□□□□ -2.22
COL11A1P12107 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.21□□□□□ -2.22
COL11A1P12107 RPL31P58-201ENST00000469001 379 ntBASIC1.21□□□□□ -2.22
COL11A1P12107 AC010424.1-201ENST00000506336 297 ntBASIC1.21□□□□□ -2.22
COL11A1P12107 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
COL11A1P12107 AC022616.6-201ENST00000520479 119 ntBASIC1.21□□□□□ -2.22
COL11A1P12107 AC024909.2-201ENST00000553035 286 ntBASIC1.21□□□□□ -2.22
COL11A1P12107 AL157871.3-201ENST00000557231 293 ntBASIC1.21□□□□□ -2.22
COL11A1P12107 MIR5000-201ENST00000577717 103 ntBASIC1.21□□□□□ -2.22
COL11A1P12107 AC105245.1-201ENST00000581934 244 ntBASIC1.21□□□□□ -2.22
COL11A1P12107 AC002545.1-201ENST00000592511 181 ntBASIC1.21□□□□□ -2.22
COL11A1P12107 AL391813.1-201ENST00000603098 260 ntBASIC1.21□□□□□ -2.22
COL11A1P12107 AC004805.2-201ENST00000605382 482 ntBASIC1.21□□□□□ -2.22
COL11A1P12107 AC080013.6-201ENST00000606185 215 ntBASIC1.21□□□□□ -2.22
COL11A1P12107 AC069294.1-201ENST00000608397 350 ntBASIC1.21□□□□□ -2.22
COL11A1P12107 AC004223.4-201ENST00000612426 332 ntBASIC1.21□□□□□ -2.22
COL11A1P12107 AC008250.2-201ENST00000615261 205 ntBASIC1.21□□□□□ -2.22
COL11A1P12107 AC139792.2-201ENST00000624218 587 ntBASIC1.21□□□□□ -2.22
COL11A1P12107 AP003400.5-201ENST00000624827 617 ntBASIC1.21□□□□□ -2.22
COL11A1P12107 MTND5P30-201ENST00000452896 1731 ntBASIC1.21□□□□□ -2.22
COL11A1P12107 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
COL11A1P12107 RNU4-21P-201ENST00000362802 126 ntBASIC1.2□□□□□ -2.22
COL11A1P12107 Y_RNA.318-201ENST00000365131 97 ntBASIC1.2□□□□□ -2.22
COL11A1P12107 RNU6-1105P-201ENST00000384774 107 ntBASIC1.2□□□□□ -2.22
COL11A1P12107 MIR95-201ENST00000385072 81 ntBASIC1.2□□□□□ -2.22
COL11A1P12107 NDUFS5P1-201ENST00000405668 289 ntBASIC1.2□□□□□ -2.22
COL11A1P12107 RNA5SP111-201ENST00000411386 101 ntBASIC1.2□□□□□ -2.22
COL11A1P12107 CYCSP48-201ENST00000417124 323 ntBASIC1.2□□□□□ -2.22
COL11A1P12107 BX295541.1-201ENST00000417774 250 ntBASIC1.2□□□□□ -2.22
COL11A1P12107 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.2□□□□□ -2.22
COL11A1P12107 ISCA1P1-201ENST00000426679 387 ntBASIC1.2□□□□□ -2.22
COL11A1P12107 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.2□□□□□ -2.22
COL11A1P12107 SNRPEP9-201ENST00000436794 238 ntBASIC1.2□□□□□ -2.22
COL11A1P12107 AC117522.1-201ENST00000509821 380 ntBASIC1.2□□□□□ -2.22
COL11A1P12107 RNA5SP384-201ENST00000516615 116 ntBASIC1.2□□□□□ -2.22
COL11A1P12107 RNU6-572P-201ENST00000516724 80 ntBASIC1.2□□□□□ -2.22
COL11A1P12107 RNU6-143P-201ENST00000516942 93 ntBASIC1.2□□□□□ -2.22
COL11A1P12107 RNA5SP291-201ENST00000517222 105 ntBASIC1.2□□□□□ -2.22
COL11A1P12107 ADI1P3-201ENST00000549509 470 ntBASIC1.2□□□□□ -2.22
COL11A1P12107 LINC00933-203ENST00000559812 219 ntBASIC1.2□□□□□ -2.22
COL11A1P12107 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.2□□□□□ -2.22
COL11A1P12107 AF038458.1-201ENST00000588406 262 ntBASIC1.2□□□□□ -2.22
COL11A1P12107 AC008749.1-201ENST00000597650 306 ntBASIC1.2□□□□□ -2.22
COL11A1P12107 AL022154.1-201ENST00000604698 785 ntBASIC1.2□□□□□ -2.22
COL11A1P12107 AC064872.1-201ENST00000604823 1072 ntBASIC1.2□□□□□ -2.22
COL11A1P12107 AL021997.1-201ENST00000605757 193 ntBASIC1.2□□□□□ -2.22
COL11A1P12107 AL627230.6-201ENST00000611129 280 ntBASIC1.2□□□□□ -2.22
COL11A1P12107 AC138649.3-201ENST00000622154 254 ntBASIC1.2□□□□□ -2.22
COL11A1P12107 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.2□□□□□ -2.22
COL11A1P12107 RNU6-1097P-201ENST00000363586 107 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 RNU6-884P-201ENST00000363889 107 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 SNORA62.1-201ENST00000364287 154 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 U3.13-201ENST00000364804 214 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 Y_RNA.296-201ENST00000364930 108 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 Y_RNA.436-201ENST00000384097 102 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 RNU6-517P-201ENST00000384362 110 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
COL11A1P12107 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
COL11A1P12107 NDUFS5P4-201ENST00000412983 318 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 SNRPEP10-201ENST00000420249 274 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.19□□□□□ -2.22
COL11A1P12107 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.19□□□□□ -2.22
COL11A1P12107 GPM6BP2-201ENST00000432046 144 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 AC119618.1-201ENST00000434191 222 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 AC073614.1-201ENST00000438690 650 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 GPM6BP1-201ENST00000446387 144 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.19□□□□□ -2.22
COL11A1P12107 MTND1P29-201ENST00000448112 647 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 USP9YP12-201ENST00000450481 570 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 AL049874.1-201ENST00000489560 388 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.19□□□□□ -2.22
COL11A1P12107 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.19□□□□□ -2.22
COL11A1P12107 SNORA31.6-201ENST00000516241 130 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 RNA5SP476-201ENST00000516613 103 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.19□□□□□ -2.22
COL11A1P12107 AC060788.1-201ENST00000521318 469 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 AP002453.2-201ENST00000533503 320 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
COL11A1P12107 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.19□□□□□ -2.22
COL11A1P12107 MIR4765-201ENST00000585007 77 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 AC005261.5-201ENST00000596280 355 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 Z99129.1-201ENST00000612510 255 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 TUG1_2.1-201ENST00000614234 87 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 AC093648.1-201ENST00000623546 606 ntBASIC1.19□□□□□ -2.22
COL11A1P12107 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.19□□□□□ -2.22
COL11A1P12107 MIR6863-201ENST00000636112 90 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms