Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.01□□□□□ -2.09
TOP1P11387 AC099654.12-201ENST00000639868 649 ntBASIC2.01□□□□□ -2.09
TOP1P11387 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
TOP1P11387 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
TOP1P11387 MTND5P17-201ENST00000418405 1603 ntBASIC2□□□□□ -2.09
TOP1P11387 Y_RNA.1-201ENST00000352915 104 ntBASIC2□□□□□ -2.09
TOP1P11387 RNA5SP190-201ENST00000365222 118 ntBASIC2□□□□□ -2.09
TOP1P11387 Y_RNA.409-201ENST00000383990 98 ntBASIC2□□□□□ -2.09
TOP1P11387 Y_RNA.576-201ENST00000384781 102 ntBASIC2□□□□□ -2.09
TOP1P11387 MIR454-201ENST00000390180 115 ntBASIC2□□□□□ -2.09
TOP1P11387 RNU4-55P-201ENST00000410731 137 ntBASIC2□□□□□ -2.09
TOP1P11387 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2□□□□□ -2.09
TOP1P11387 AC244636.1-201ENST00000421152 228 ntBASIC2□□□□□ -2.09
TOP1P11387 AC002486.1-201ENST00000435098 391 ntBASIC2□□□□□ -2.09
TOP1P11387 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2□□□□□ -2.09
TOP1P11387 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2□□□□□ -2.09
TOP1P11387 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2□□□□□ -2.09
TOP1P11387 AC093899.1-201ENST00000457984 376 ntBASIC2□□□□□ -2.09
TOP1P11387 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2□□□□□ -2.09
TOP1P11387 RNU6-914P-201ENST00000516749 109 ntBASIC2□□□□□ -2.09
TOP1P11387 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2□□□□□ -2.09
TOP1P11387 NTS-203ENST00000551529 801 ntTSL 3 BASIC2□□□□□ -2.09
TOP1P11387 MIR3122-201ENST00000577243 73 ntBASIC2□□□□□ -2.09
TOP1P11387 MIR3618-201ENST00000580330 88 ntBASIC2□□□□□ -2.09
TOP1P11387 MIR15A-201ENST00000607334 83 ntBASIC2□□□□□ -2.09
TOP1P11387 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2□□□□□ -2.09
TOP1P11387 AL158209.2-201ENST00000619266 216 ntBASIC2□□□□□ -2.09
TOP1P11387 AL359740.1-201ENST00000624340 592 ntBASIC2□□□□□ -2.09
TOP1P11387 MIR6863-201ENST00000636112 90 ntBASIC2□□□□□ -2.09
TOP1P11387 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TOP1P11387 ZNF680P1-201ENST00000436625 1469 ntBASIC2□□□□□ -2.09
TOP1P11387 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2□□□□□ -2.09
TOP1P11387 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.99□□□□□ -2.09
TOP1P11387 RNU6-1120P-201ENST00000362988 108 ntBASIC1.99□□□□□ -2.09
TOP1P11387 Y_RNA.381-201ENST00000365666 102 ntBASIC1.99□□□□□ -2.09
TOP1P11387 RNU6-641P-201ENST00000384006 107 ntBASIC1.99□□□□□ -2.09
TOP1P11387 RNU6-780P-201ENST00000391030 104 ntBASIC1.99□□□□□ -2.09
TOP1P11387 RNA5SP213-201ENST00000391031 106 ntBASIC1.99□□□□□ -2.09
TOP1P11387 RNU6-1158P-201ENST00000391167 107 ntBASIC1.99□□□□□ -2.09
TOP1P11387 MTCO3P40-201ENST00000392516 676 ntBASIC1.99□□□□□ -2.09
TOP1P11387 RNU2-9P-201ENST00000410194 145 ntBASIC1.99□□□□□ -2.09
TOP1P11387 Y_RNA.599-201ENST00000410489 109 ntBASIC1.99□□□□□ -2.09
TOP1P11387 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.99□□□□□ -2.09
TOP1P11387 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.99□□□□□ -2.09
TOP1P11387 CALM2P2-201ENST00000428512 440 ntBASIC1.99□□□□□ -2.09
TOP1P11387 AC073464.1-201ENST00000429823 534 ntBASIC1.99□□□□□ -2.09
TOP1P11387 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.99□□□□□ -2.09
TOP1P11387 AL591704.1-201ENST00000432574 275 ntBASIC1.99□□□□□ -2.09
TOP1P11387 AL591212.2-201ENST00000433923 257 ntBASIC1.99□□□□□ -2.09
TOP1P11387 MTND1P1-201ENST00000445453 368 ntBASIC1.99□□□□□ -2.09
TOP1P11387 AL137159.1-201ENST00000452808 512 ntBASIC1.99□□□□□ -2.09
TOP1P11387 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.99□□□□□ -2.09
TOP1P11387 AC019235.1-201ENST00000503847 207 ntBASIC1.99□□□□□ -2.09
TOP1P11387 HMGB3P17-201ENST00000504195 649 ntBASIC1.99□□□□□ -2.09
TOP1P11387 AC109927.2-201ENST00000506416 303 ntBASIC1.99□□□□□ -2.09
TOP1P11387 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.99□□□□□ -2.09
TOP1P11387 RNU6-123P-201ENST00000516163 102 ntBASIC1.99□□□□□ -2.09
TOP1P11387 RNU6-685P-201ENST00000517088 95 ntBASIC1.99□□□□□ -2.09
TOP1P11387 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.99□□□□□ -2.09
TOP1P11387 AP005639.2-201ENST00000527592 928 ntBASIC1.99□□□□□ -2.09
TOP1P11387 AP005435.4-201ENST00000529514 284 ntBASIC1.99□□□□□ -2.09
TOP1P11387 AC016957.1-201ENST00000534895 309 ntBASIC1.99□□□□□ -2.09
TOP1P11387 AC104581.2-201ENST00000572227 430 ntBASIC1.99□□□□□ -2.09
TOP1P11387 AC008752.3-201ENST00000588113 712 ntBASIC1.99□□□□□ -2.09
TOP1P11387 AC068790.6-201ENST00000602558 258 ntBASIC1.99□□□□□ -2.09
TOP1P11387 AC012557.2-201ENST00000605919 418 ntBASIC1.99□□□□□ -2.09
TOP1P11387 MIR502-201ENST00000606349 86 ntBASIC1.99□□□□□ -2.09
TOP1P11387 AP001596.2-201ENST00000608410 312 ntBASIC1.99□□□□□ -2.09
TOP1P11387 AC012409.4-201ENST00000612923 249 ntBASIC1.99□□□□□ -2.09
TOP1P11387 AC005609.4-201ENST00000625071 447 ntBASIC1.99□□□□□ -2.09
TOP1P11387 Z99571.1-201ENST00000636677 394 ntBASIC1.99□□□□□ -2.09
TOP1P11387 ZNF72P-201ENST00000425869 1908 ntBASIC1.98□□□□□ -2.09
TOP1P11387 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TOP1P11387 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TOP1P11387 OR4G2P-201ENST00000328113 903 ntBASIC1.98□□□□□ -2.09
TOP1P11387 SNORA62.1-201ENST00000364287 154 ntBASIC1.98□□□□□ -2.09
TOP1P11387 SNORD48-201ENST00000364953 64 ntBASIC1.98□□□□□ -2.09
TOP1P11387 RNU4-48P-201ENST00000365559 182 ntBASIC1.98□□□□□ -2.09
TOP1P11387 SNORA75B-201ENST00000384053 137 ntBASIC1.98□□□□□ -2.09
TOP1P11387 Y_RNA.554-201ENST00000384672 102 ntBASIC1.98□□□□□ -2.09
TOP1P11387 RNU6-606P-201ENST00000384721 111 ntBASIC1.98□□□□□ -2.09
TOP1P11387 RNA5SP212-201ENST00000391223 107 ntBASIC1.98□□□□□ -2.09
TOP1P11387 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TOP1P11387 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TOP1P11387 AL133475.1-201ENST00000404414 305 ntBASIC1.98□□□□□ -2.09
TOP1P11387 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.98□□□□□ -2.09
TOP1P11387 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.98□□□□□ -2.09
TOP1P11387 MTCYBP5-201ENST00000423752 1135 ntBASIC1.98□□□□□ -2.09
TOP1P11387 MTND2P29-201ENST00000438595 412 ntBASIC1.98□□□□□ -2.09
TOP1P11387 AC104058.1-201ENST00000448028 297 ntBASIC1.98□□□□□ -2.09
TOP1P11387 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.98□□□□□ -2.09
TOP1P11387 AL162395.1-201ENST00000457882 422 ntBASIC1.98□□□□□ -2.09
TOP1P11387 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.98□□□□□ -2.09
TOP1P11387 AC009646.1-201ENST00000510455 318 ntBASIC1.98□□□□□ -2.09
TOP1P11387 RNU6-506P-201ENST00000516553 94 ntBASIC1.98□□□□□ -2.09
TOP1P11387 RNU6-677P-201ENST00000516914 101 ntBASIC1.98□□□□□ -2.09
TOP1P11387 AP003033.1-201ENST00000527244 415 ntBASIC1.98□□□□□ -2.09
TOP1P11387 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.98□□□□□ -2.09
TOP1P11387 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.98□□□□□ -2.09
TOP1P11387 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms