Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 AL021397.1-201ENST00000451806 248 ntBASIC2.22□□□□□ -2.05
VIMP08670 MTND3P16-201ENST00000452205 344 ntBASIC2.22□□□□□ -2.05
VIMP08670 RNU7-138P-201ENST00000459479 64 ntBASIC2.22□□□□□ -2.05
VIMP08670 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
VIMP08670 Y_RNA.704-201ENST00000516851 102 ntBASIC2.22□□□□□ -2.05
VIMP08670 AC021269.2-201ENST00000532318 330 ntBASIC2.22□□□□□ -2.05
VIMP08670 AP000763.2-201ENST00000540641 163 ntBASIC2.22□□□□□ -2.05
VIMP08670 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.22□□□□□ -2.05
VIMP08670 AC027807.1-201ENST00000559921 996 ntBASIC2.22□□□□□ -2.05
VIMP08670 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.22□□□□□ -2.05
VIMP08670 LARP7P3-201ENST00000579888 337 ntBASIC2.22□□□□□ -2.05
VIMP08670 VN1R107P-201ENST00000601784 209 ntBASIC2.22□□□□□ -2.05
VIMP08670 AL160281.1-201ENST00000605307 311 ntBASIC2.22□□□□□ -2.05
VIMP08670 AC063943.3-201ENST00000615562 356 ntBASIC2.22□□□□□ -2.05
VIMP08670 AC103705.1-201ENST00000619013 241 ntBASIC2.22□□□□□ -2.05
VIMP08670 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.22□□□□□ -2.05
VIMP08670 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
VIMP08670 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VIMP08670 MIR676-201ENST00000390702 67 ntBASIC2.21□□□□□ -2.06
VIMP08670 RNU2-52P-201ENST00000410680 190 ntBASIC2.21□□□□□ -2.06
VIMP08670 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.21□□□□□ -2.06
VIMP08670 USP9YP18-201ENST00000425912 695 ntBASIC2.21□□□□□ -2.06
VIMP08670 AC006946.1-201ENST00000429106 328 ntBASIC2.21□□□□□ -2.06
VIMP08670 AL589823.1-201ENST00000429577 183 ntBASIC2.21□□□□□ -2.06
VIMP08670 RPS15AP10-201ENST00000432472 382 ntBASIC2.21□□□□□ -2.06
VIMP08670 SNAP23P1-201ENST00000433229 246 ntBASIC2.21□□□□□ -2.06
VIMP08670 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.21□□□□□ -2.06
VIMP08670 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.21□□□□□ -2.06
VIMP08670 RPS3P1-201ENST00000456781 192 ntBASIC2.21□□□□□ -2.06
VIMP08670 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.21□□□□□ -2.06
VIMP08670 AC025033.1-201ENST00000463883 194 ntBASIC2.21□□□□□ -2.06
VIMP08670 RPL21P99-201ENST00000480369 423 ntBASIC2.21□□□□□ -2.06
VIMP08670 RNA5SP364-201ENST00000516938 78 ntBASIC2.21□□□□□ -2.06
VIMP08670 RNU6-667P-201ENST00000517186 102 ntBASIC2.21□□□□□ -2.06
VIMP08670 AC115990.1-201ENST00000526957 301 ntBASIC2.21□□□□□ -2.06
VIMP08670 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.21□□□□□ -2.06
VIMP08670 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.21□□□□□ -2.06
VIMP08670 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.21□□□□□ -2.06
VIMP08670 AC015540.1-201ENST00000615828 501 ntBASIC2.21□□□□□ -2.06
VIMP08670 MIR6132-201ENST00000622083 109 ntBASIC2.21□□□□□ -2.06
VIMP08670 AC099654.12-201ENST00000639868 649 ntBASIC2.21□□□□□ -2.06
VIMP08670 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.21□□□□□ -2.06
VIMP08670 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
VIMP08670 RNU6-623P-201ENST00000363143 105 ntBASIC2.2□□□□□ -2.06
VIMP08670 RNU6-1141P-201ENST00000364520 107 ntBASIC2.2□□□□□ -2.06
VIMP08670 RNA5SP160-201ENST00000364866 120 ntBASIC2.2□□□□□ -2.06
VIMP08670 RNU6-546P-201ENST00000383991 107 ntBASIC2.2□□□□□ -2.06
VIMP08670 RNU6-483P-201ENST00000384088 108 ntBASIC2.2□□□□□ -2.06
VIMP08670 MIR483-201ENST00000385070 76 ntBASIC2.2□□□□□ -2.06
VIMP08670 RPL17P50-201ENST00000396131 546 ntBASIC2.2□□□□□ -2.06
VIMP08670 RNU2-48P-201ENST00000410694 191 ntBASIC2.2□□□□□ -2.06
VIMP08670 RNU6-1068P-201ENST00000410958 103 ntBASIC2.2□□□□□ -2.06
VIMP08670 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.2□□□□□ -2.06
VIMP08670 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
VIMP08670 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.2□□□□□ -2.06
VIMP08670 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
VIMP08670 HMGB1P35-201ENST00000503360 598 ntBASIC2.2□□□□□ -2.06
VIMP08670 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.2□□□□□ -2.06
VIMP08670 AC107953.1-201ENST00000522216 297 ntBASIC2.2□□□□□ -2.06
VIMP08670 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.2□□□□□ -2.06
VIMP08670 AK6P1-201ENST00000540219 478 ntBASIC2.2□□□□□ -2.06
VIMP08670 NDUFA5P6-201ENST00000542110 379 ntBASIC2.2□□□□□ -2.06
VIMP08670 AL512310.1-201ENST00000548639 172 ntBASIC2.2□□□□□ -2.06
VIMP08670 HMGB1P33-201ENST00000563485 527 ntBASIC2.2□□□□□ -2.06
VIMP08670 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.2□□□□□ -2.06
VIMP08670 AC103810.6-201ENST00000606708 136 ntBASIC2.2□□□□□ -2.06
VIMP08670 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.2□□□□□ -2.06
VIMP08670 AF250324.2-201ENST00000608299 610 ntBASIC2.2□□□□□ -2.06
VIMP08670 AC092807.2-201ENST00000609367 243 ntBASIC2.2□□□□□ -2.06
VIMP08670 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
VIMP08670 AC087241.4-201ENST00000612441 480 ntBASIC2.2□□□□□ -2.06
VIMP08670 YWHAEP7-203ENST00000622054 312 ntBASIC2.2□□□□□ -2.06
VIMP08670 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
VIMP08670 RNA5SP68-201ENST00000363885 119 ntBASIC2.19□□□□□ -2.06
VIMP08670 SNORD32A-201ENST00000364805 84 ntBASIC2.19□□□□□ -2.06
VIMP08670 MIR128-1-201ENST00000384921 82 ntBASIC2.19□□□□□ -2.06
VIMP08670 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
VIMP08670 Y_RNA.597-201ENST00000410463 100 ntBASIC2.19□□□□□ -2.06
VIMP08670 AC244670.1-201ENST00000436879 112 ntBASIC2.19□□□□□ -2.06
VIMP08670 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.19□□□□□ -2.06
VIMP08670 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.19□□□□□ -2.06
VIMP08670 Y_RNA.654-201ENST00000497848 106 ntBASIC2.19□□□□□ -2.06
VIMP08670 AC091885.1-201ENST00000506658 268 ntBASIC2.19□□□□□ -2.06
VIMP08670 RNU6-1281P-201ENST00000516223 105 ntBASIC2.19□□□□□ -2.06
VIMP08670 RNU6-506P-201ENST00000516553 94 ntBASIC2.19□□□□□ -2.06
VIMP08670 RNU6-314P-201ENST00000516574 104 ntBASIC2.19□□□□□ -2.06
VIMP08670 RNU6-1069P-201ENST00000516612 133 ntBASIC2.19□□□□□ -2.06
VIMP08670 RNU6-965P-201ENST00000516721 96 ntBASIC2.19□□□□□ -2.06
VIMP08670 SNORA31.25-201ENST00000517242 134 ntBASIC2.19□□□□□ -2.06
VIMP08670 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.19□□□□□ -2.06
VIMP08670 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.19□□□□□ -2.06
VIMP08670 MIR5007-201ENST00000583098 95 ntBASIC2.19□□□□□ -2.06
VIMP08670 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.19□□□□□ -2.06
VIMP08670 MIR5002-201ENST00000584713 97 ntBASIC2.19□□□□□ -2.06
VIMP08670 AL031274.2-201ENST00000599419 203 ntBASIC2.19□□□□□ -2.06
VIMP08670 AL096840.1-201ENST00000603287 93 ntBASIC2.19□□□□□ -2.06
VIMP08670 AL034555.1-201ENST00000604816 211 ntBASIC2.19□□□□□ -2.06
VIMP08670 AC046143.2-201ENST00000609789 160 ntBASIC2.19□□□□□ -2.06
VIMP08670 AL121757.2-201ENST00000611223 313 ntBASIC2.19□□□□□ -2.06
VIMP08670 SDR42E1P4-201ENST00000620894 481 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms