Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 SNORA32.2-201ENST00000384049 122 ntBASIC1.04□□□□□ -2.24
APOA1P02647 SNORA12.2-201ENST00000391040 156 ntBASIC1.04□□□□□ -2.24
APOA1P02647 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
APOA1P02647 SNX2P2-201ENST00000424553 323 ntBASIC1.04□□□□□ -2.24
APOA1P02647 AC137499.1-201ENST00000427602 88 ntBASIC1.04□□□□□ -2.24
APOA1P02647 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.04□□□□□ -2.24
APOA1P02647 MTND1P20-201ENST00000430341 950 ntBASIC1.04□□□□□ -2.24
APOA1P02647 MTCYBP39-201ENST00000437562 491 ntBASIC1.04□□□□□ -2.24
APOA1P02647 PGBD4P5-201ENST00000445958 426 ntBASIC1.04□□□□□ -2.24
APOA1P02647 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.04□□□□□ -2.24
APOA1P02647 HMGN2P9-201ENST00000476875 229 ntBASIC1.04□□□□□ -2.24
APOA1P02647 AC004223.1-201ENST00000479840 271 ntBASIC1.04□□□□□ -2.24
APOA1P02647 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.04□□□□□ -2.24
APOA1P02647 MTND3P25-201ENST00000509243 135 ntBASIC1.04□□□□□ -2.24
APOA1P02647 RNU6-295P-201ENST00000516901 104 ntBASIC1.04□□□□□ -2.24
APOA1P02647 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.04□□□□□ -2.24
APOA1P02647 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.04□□□□□ -2.24
APOA1P02647 AL512310.8-201ENST00000550183 120 ntBASIC1.04□□□□□ -2.24
APOA1P02647 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
APOA1P02647 AC011494.1-201ENST00000596454 237 ntBASIC1.04□□□□□ -2.24
APOA1P02647 MIR3976-201ENST00000606807 139 ntBASIC1.04□□□□□ -2.24
APOA1P02647 U4.7-201ENST00000638126 106 ntBASIC1.04□□□□□ -2.24
APOA1P02647 RNU6-105P-201ENST00000363909 104 ntBASIC1.03□□□□□ -2.24
APOA1P02647 RNU6-641P-201ENST00000384006 107 ntBASIC1.03□□□□□ -2.24
APOA1P02647 SNORA40.6-201ENST00000391153 128 ntBASIC1.03□□□□□ -2.24
APOA1P02647 CALM2P2-201ENST00000428512 440 ntBASIC1.03□□□□□ -2.24
APOA1P02647 AC119618.1-201ENST00000434191 222 ntBASIC1.03□□□□□ -2.24
APOA1P02647 RPL37P21-201ENST00000435890 276 ntBASIC1.03□□□□□ -2.24
APOA1P02647 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.03□□□□□ -2.24
APOA1P02647 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.03□□□□□ -2.24
APOA1P02647 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.03□□□□□ -2.24
APOA1P02647 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.03□□□□□ -2.24
APOA1P02647 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.03□□□□□ -2.24
APOA1P02647 MTND4LP18-201ENST00000526864 291 ntBASIC1.03□□□□□ -2.24
APOA1P02647 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.03□□□□□ -2.24
APOA1P02647 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.03□□□□□ -2.24
APOA1P02647 MIR3660-201ENST00000584845 100 ntBASIC1.03□□□□□ -2.24
APOA1P02647 AC008521.1-201ENST00000587471 187 ntBASIC1.03□□□□□ -2.24
APOA1P02647 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.03□□□□□ -2.24
APOA1P02647 HSPE1P19-201ENST00000603327 295 ntBASIC1.03□□□□□ -2.24
APOA1P02647 AC012507.3-201ENST00000603556 477 ntBASIC1.03□□□□□ -2.24
APOA1P02647 MZT1P2-201ENST00000604387 248 ntBASIC1.03□□□□□ -2.24
APOA1P02647 SNORA63D-201ENST00000364359 132 ntBASIC1.02□□□□□ -2.25
APOA1P02647 RNA5SP190-201ENST00000365222 118 ntBASIC1.02□□□□□ -2.25
APOA1P02647 SNORA67.5-201ENST00000391036 107 ntBASIC1.02□□□□□ -2.25
APOA1P02647 SNORA26.9-201ENST00000391322 122 ntBASIC1.02□□□□□ -2.25
APOA1P02647 RNU2-39P-201ENST00000410604 198 ntBASIC1.02□□□□□ -2.25
APOA1P02647 MTCO2P21-201ENST00000419780 677 ntBASIC1.02□□□□□ -2.25
APOA1P02647 RPS27AP14-201ENST00000422868 454 ntBASIC1.02□□□□□ -2.25
APOA1P02647 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.02□□□□□ -2.25
APOA1P02647 EXOSC3P1-201ENST00000448649 500 ntBASIC1.02□□□□□ -2.25
APOA1P02647 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.02□□□□□ -2.25
APOA1P02647 RPL31P3-201ENST00000458430 332 ntBASIC1.02□□□□□ -2.25
APOA1P02647 AC114982.1-201ENST00000469402 321 ntBASIC1.02□□□□□ -2.25
APOA1P02647 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.02□□□□□ -2.25
APOA1P02647 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.02□□□□□ -2.25
APOA1P02647 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.02□□□□□ -2.25
APOA1P02647 AC117522.1-201ENST00000509821 380 ntBASIC1.02□□□□□ -2.25
APOA1P02647 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.02□□□□□ -2.25
APOA1P02647 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.02□□□□□ -2.25
APOA1P02647 AC084364.2-201ENST00000546924 395 ntBASIC1.02□□□□□ -2.25
APOA1P02647 BNIP3P8-201ENST00000597863 560 ntBASIC1.02□□□□□ -2.25
APOA1P02647 AC103810.9-201ENST00000606688 112 ntBASIC1.02□□□□□ -2.25
APOA1P02647 AL451064.1-201ENST00000607718 471 ntBASIC1.02□□□□□ -2.25
APOA1P02647 AL365434.2-201ENST00000607979 234 ntBASIC1.02□□□□□ -2.25
APOA1P02647 AL607023.1-201ENST00000620045 248 ntBASIC1.02□□□□□ -2.25
APOA1P02647 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.01□□□□□ -2.25
APOA1P02647 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
APOA1P02647 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
APOA1P02647 RNU1-96P-201ENST00000364163 162 ntBASIC1.01□□□□□ -2.25
APOA1P02647 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
APOA1P02647 RNU6-157P-201ENST00000383957 107 ntBASIC1.01□□□□□ -2.25
APOA1P02647 MTCYBP2-201ENST00000407745 171 ntBASIC1.01□□□□□ -2.25
APOA1P02647 OR6C66P-201ENST00000414917 930 ntBASIC1.01□□□□□ -2.25
APOA1P02647 ARL5AP1-201ENST00000418991 388 ntBASIC1.01□□□□□ -2.25
APOA1P02647 AL590135.1-201ENST00000422215 156 ntBASIC1.01□□□□□ -2.25
APOA1P02647 AC019205.3-201ENST00000424573 156 ntBASIC1.01□□□□□ -2.25
APOA1P02647 AC007283.2-201ENST00000424739 197 ntBASIC1.01□□□□□ -2.25
APOA1P02647 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.01□□□□□ -2.25
APOA1P02647 AC000111.3-201ENST00000433478 193 ntBASIC1.01□□□□□ -2.25
APOA1P02647 RPS24P1-201ENST00000438550 371 ntBASIC1.01□□□□□ -2.25
APOA1P02647 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.01□□□□□ -2.25
APOA1P02647 AC243964.1-201ENST00000441814 261 ntBASIC1.01□□□□□ -2.25
APOA1P02647 AC016700.2-201ENST00000446011 156 ntBASIC1.01□□□□□ -2.25
APOA1P02647 AL031313.1-201ENST00000448435 256 ntBASIC1.01□□□□□ -2.25
APOA1P02647 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.01□□□□□ -2.25
APOA1P02647 snoU13.27-201ENST00000459278 104 ntBASIC1.01□□□□□ -2.25
APOA1P02647 TOMM22P6-201ENST00000465035 409 ntBASIC1.01□□□□□ -2.25
APOA1P02647 AC015911.1-201ENST00000495111 156 ntBASIC1.01□□□□□ -2.25
APOA1P02647 AC112204.1-201ENST00000502591 103 ntBASIC1.01□□□□□ -2.25
APOA1P02647 AC010587.1-201ENST00000505809 469 ntBASIC1.01□□□□□ -2.25
APOA1P02647 RN7SKP88-201ENST00000516847 250 ntBASIC1.01□□□□□ -2.25
APOA1P02647 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.01□□□□□ -2.25
APOA1P02647 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.01□□□□□ -2.25
APOA1P02647 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.01□□□□□ -2.25
APOA1P02647 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.01□□□□□ -2.25
APOA1P02647 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.01□□□□□ -2.25
APOA1P02647 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.01□□□□□ -2.25
APOA1P02647 SNORA59B-202ENST00000578183 701 ntBASIC1.01□□□□□ -2.25
APOA1P02647 AP005136.1-201ENST00000579765 429 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms