Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.12□□□□□ -2.39
TNFP01375 MIR6718-201ENST00000616153 80 ntBASIC0.12□□□□□ -2.39
TNFP01375 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.12□□□□□ -2.39
TNFP01375 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.12□□□□□ -2.39
TNFP01375 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
TNFP01375 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.11□□□□□ -2.39
TNFP01375 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.11□□□□□ -2.39
TNFP01375 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
TNFP01375 RNU6-432P-201ENST00000384196 109 ntBASIC0.11□□□□□ -2.39
TNFP01375 RNA5SP127-201ENST00000411051 133 ntBASIC0.11□□□□□ -2.39
TNFP01375 BX119904.4-201ENST00000424402 301 ntBASIC0.11□□□□□ -2.39
TNFP01375 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.11□□□□□ -2.39
TNFP01375 RAB28P5-201ENST00000427490 651 ntBASIC0.11□□□□□ -2.39
TNFP01375 MTCO3P18-201ENST00000440206 761 ntBASIC0.11□□□□□ -2.39
TNFP01375 AC048334.1-201ENST00000477975 159 ntBASIC0.11□□□□□ -2.39
TNFP01375 MTND1P3-201ENST00000484956 952 ntBASIC0.11□□□□□ -2.39
TNFP01375 AC108740.1-201ENST00000498629 225 ntBASIC0.11□□□□□ -2.39
TNFP01375 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.11□□□□□ -2.39
TNFP01375 AC091860.1-201ENST00000505723 432 ntBASIC0.11□□□□□ -2.39
TNFP01375 MTCO3P7-201ENST00000510008 774 ntBASIC0.11□□□□□ -2.39
TNFP01375 SNORA68.3-201ENST00000515906 83 ntBASIC0.11□□□□□ -2.39
TNFP01375 SNORD79.1-201ENST00000516069 84 ntBASIC0.11□□□□□ -2.39
TNFP01375 RNU6-714P-201ENST00000516963 103 ntBASIC0.11□□□□□ -2.39
TNFP01375 AC136618.2-201ENST00000575091 400 ntBASIC0.11□□□□□ -2.39
TNFP01375 MIR4637-201ENST00000582405 84 ntBASIC0.11□□□□□ -2.39
TNFP01375 BNIP3P30-201ENST00000601184 574 ntBASIC0.11□□□□□ -2.39
TNFP01375 AL451064.1-201ENST00000607718 471 ntBASIC0.11□□□□□ -2.39
TNFP01375 AC008759.3-201ENST00000613300 508 ntBASIC0.11□□□□□ -2.39
TNFP01375 AC126177.8-201ENST00000618339 1015 ntBASIC0.11□□□□□ -2.39
TNFP01375 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.11□□□□□ -2.39
TNFP01375 MIR3529-201ENST00000637713 78 ntBASIC0.11□□□□□ -2.39
TNFP01375 AC073544.1-201ENST00000600110 1595 ntBASIC0.11□□□□□ -2.39
TNFP01375 MIR340-201ENST00000362125 95 ntBASIC0.1□□□□□ -2.39
TNFP01375 snoU2_19.1-201ENST00000362361 80 ntBASIC0.1□□□□□ -2.39
TNFP01375 RNU6-1066P-201ENST00000363573 105 ntBASIC0.1□□□□□ -2.39
TNFP01375 SNORD115-48-201ENST00000364764 76 ntBASIC0.1□□□□□ -2.39
TNFP01375 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
TNFP01375 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.1□□□□□ -2.39
TNFP01375 TPMTP2-201ENST00000414372 726 ntBASIC0.1□□□□□ -2.39
TNFP01375 UBE2V1P10-201ENST00000414685 269 ntBASIC0.1□□□□□ -2.39
TNFP01375 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.1□□□□□ -2.39
TNFP01375 TPTE2P1-204ENST00000435256 593 ntBASIC0.1□□□□□ -2.39
TNFP01375 MTND1P30-201ENST00000441241 901 ntBASIC0.1□□□□□ -2.39
TNFP01375 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.1□□□□□ -2.39
TNFP01375 AC104629.1-201ENST00000494226 508 ntBASIC0.1□□□□□ -2.39
TNFP01375 AC022493.2-201ENST00000506122 481 ntBASIC0.1□□□□□ -2.39
TNFP01375 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.1□□□□□ -2.39
TNFP01375 RNU6-572P-201ENST00000516724 80 ntBASIC0.1□□□□□ -2.39
TNFP01375 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.1□□□□□ -2.39
TNFP01375 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.1□□□□□ -2.39
TNFP01375 AC133794.1-201ENST00000602731 914 ntBASIC0.1□□□□□ -2.39
TNFP01375 AC078795.2-201ENST00000602835 1252 ntBASIC0.1□□□□□ -2.39
TNFP01375 AC022022.2-201ENST00000602989 360 ntBASIC0.1□□□□□ -2.39
TNFP01375 AC063943.3-201ENST00000615562 356 ntBASIC0.1□□□□□ -2.39
TNFP01375 SNORA63D-201ENST00000364359 132 ntBASIC0.09□□□□□ -2.4
TNFP01375 RNU6-1335P-201ENST00000365426 107 ntBASIC0.09□□□□□ -2.4
TNFP01375 RNU6-359P-201ENST00000365466 108 ntBASIC0.09□□□□□ -2.4
TNFP01375 RAP1BP3-201ENST00000407180 549 ntBASIC0.09□□□□□ -2.4
TNFP01375 MTND1P21-201ENST00000412991 285 ntBASIC0.09□□□□□ -2.4
TNFP01375 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.09□□□□□ -2.4
TNFP01375 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.09□□□□□ -2.4
TNFP01375 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.09□□□□□ -2.4
TNFP01375 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.09□□□□□ -2.4
TNFP01375 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.09□□□□□ -2.4
TNFP01375 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.09□□□□□ -2.4
TNFP01375 AL353752.1-201ENST00000454946 260 ntBASIC0.09□□□□□ -2.4
TNFP01375 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.09□□□□□ -2.4
TNFP01375 RPS26P48-201ENST00000491713 339 ntBASIC0.09□□□□□ -2.4
TNFP01375 CYCTP-201ENST00000504253 315 ntBASIC0.09□□□□□ -2.4
TNFP01375 AC105313.1-201ENST00000509121 353 ntBASIC0.09□□□□□ -2.4
TNFP01375 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.09□□□□□ -2.4
TNFP01375 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.09□□□□□ -2.4
TNFP01375 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.09□□□□□ -2.4
TNFP01375 AP003327.1-201ENST00000529684 127 ntBASIC0.09□□□□□ -2.4
TNFP01375 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.09□□□□□ -2.4
TNFP01375 AC091805.2-201ENST00000603848 235 ntBASIC0.09□□□□□ -2.4
TNFP01375 AP001033.2-201ENST00000609701 1003 ntBASIC0.09□□□□□ -2.4
TNFP01375 RMST_10.1-201ENST00000616309 154 ntBASIC0.09□□□□□ -2.4
TNFP01375 AC132825.7-201ENST00000638744 335 ntBASIC0.09□□□□□ -2.4
TNFP01375 AC090625.1-201ENST00000357130 210 ntBASIC0.08□□□□□ -2.4
TNFP01375 AF228730.1-201ENST00000397972 663 ntBASIC0.08□□□□□ -2.4
TNFP01375 COX6CP10-201ENST00000416832 224 ntBASIC0.08□□□□□ -2.4
TNFP01375 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.08□□□□□ -2.4
TNFP01375 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.08□□□□□ -2.4
TNFP01375 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.08□□□□□ -2.4
TNFP01375 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.08□□□□□ -2.4
TNFP01375 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.08□□□□□ -2.4
TNFP01375 RN7SKP12-201ENST00000516275 143 ntBASIC0.08□□□□□ -2.4
TNFP01375 MIR4431-201ENST00000579990 94 ntBASIC0.08□□□□□ -2.4
TNFP01375 AC098483.2-201ENST00000603158 454 ntBASIC0.08□□□□□ -2.4
TNFP01375 MIR371B-201ENST00000638082 66 ntBASIC0.08□□□□□ -2.4
TNFP01375 RNU6-212P-201ENST00000362642 104 ntBASIC0.07□□□□□ -2.4
TNFP01375 RNU6-97P-201ENST00000363387 104 ntBASIC0.07□□□□□ -2.4
TNFP01375 RNU6-1019P-201ENST00000364424 107 ntBASIC0.07□□□□□ -2.4
TNFP01375 RNU6-1176P-201ENST00000390955 107 ntBASIC0.07□□□□□ -2.4
TNFP01375 RNU6-796P-201ENST00000391086 107 ntBASIC0.07□□□□□ -2.4
TNFP01375 RPS3AP37-201ENST00000419176 745 ntBASIC0.07□□□□□ -2.4
TNFP01375 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.07□□□□□ -2.4
TNFP01375 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.07□□□□□ -2.4
TNFP01375 AC092427.1-201ENST00000439177 601 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms