Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AC121247.2-201ENST00000604776 136 ntBASIC1.86□□□□□ -2.11
MBD3O95983 Z82243.1-201ENST00000609432 473 ntBASIC1.86□□□□□ -2.11
MBD3O95983 AL773524.1-201ENST00000614065 229 ntBASIC1.86□□□□□ -2.11
MBD3O95983 AC120349.3-201ENST00000624377 529 ntBASIC1.86□□□□□ -2.11
MBD3O95983 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.86□□□□□ -2.11
MBD3O95983 Y_RNA.201-201ENST00000364052 96 ntBASIC1.85□□□□□ -2.11
MBD3O95983 RNU6-1127P-201ENST00000384580 107 ntBASIC1.85□□□□□ -2.11
MBD3O95983 MIR544A-201ENST00000384855 91 ntBASIC1.85□□□□□ -2.11
MBD3O95983 RNA5SP212-201ENST00000391223 107 ntBASIC1.85□□□□□ -2.11
MBD3O95983 RPS29P13-201ENST00000402041 169 ntBASIC1.85□□□□□ -2.11
MBD3O95983 SNORD56-201ENST00000413522 71 ntBASIC1.85□□□□□ -2.11
MBD3O95983 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.85□□□□□ -2.11
MBD3O95983 MTND4P32-201ENST00000437189 1237 ntBASIC1.85□□□□□ -2.11
MBD3O95983 AC243964.1-201ENST00000441814 261 ntBASIC1.85□□□□□ -2.11
MBD3O95983 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.85□□□□□ -2.11
MBD3O95983 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.85□□□□□ -2.11
MBD3O95983 RNU6-333P-201ENST00000459117 107 ntBASIC1.85□□□□□ -2.11
MBD3O95983 RNU2-69P-201ENST00000516061 100 ntBASIC1.85□□□□□ -2.11
MBD3O95983 RNU5F-2P-201ENST00000516066 82 ntBASIC1.85□□□□□ -2.11
MBD3O95983 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.85□□□□□ -2.11
MBD3O95983 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.85□□□□□ -2.11
MBD3O95983 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.85□□□□□ -2.11
MBD3O95983 MIR3136-201ENST00000583498 78 ntBASIC1.85□□□□□ -2.11
MBD3O95983 AL590229.1-201ENST00000603497 542 ntBASIC1.85□□□□□ -2.11
MBD3O95983 AC005296.1-201ENST00000616145 209 ntBASIC1.85□□□□□ -2.11
MBD3O95983 AC008147.4-201ENST00000617570 1204 ntBASIC1.85□□□□□ -2.11
MBD3O95983 SNORD115-3-201ENST00000363100 82 ntBASIC1.84□□□□□ -2.11
MBD3O95983 RNU6-1141P-201ENST00000364520 107 ntBASIC1.84□□□□□ -2.11
MBD3O95983 SNORD14D-201ENST00000384390 87 ntBASIC1.84□□□□□ -2.11
MBD3O95983 MIR1262-201ENST00000408276 93 ntBASIC1.84□□□□□ -2.11
MBD3O95983 MIR1283-2-201ENST00000408621 87 ntBASIC1.84□□□□□ -2.11
MBD3O95983 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.84□□□□□ -2.11
MBD3O95983 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.84□□□□□ -2.11
MBD3O95983 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.84□□□□□ -2.11
MBD3O95983 MTCO2P11-201ENST00000431069 680 ntBASIC1.84□□□□□ -2.11
MBD3O95983 RPL7P54-201ENST00000438336 674 ntBASIC1.84□□□□□ -2.11
MBD3O95983 PRPS1P1-201ENST00000445305 876 ntBASIC1.84□□□□□ -2.11
MBD3O95983 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.84□□□□□ -2.11
MBD3O95983 C1DP4-201ENST00000455429 424 ntBASIC1.84□□□□□ -2.11
MBD3O95983 AL122001.1-201ENST00000457027 370 ntBASIC1.84□□□□□ -2.11
MBD3O95983 RPS29P15-201ENST00000458329 171 ntBASIC1.84□□□□□ -2.11
MBD3O95983 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.84□□□□□ -2.11
MBD3O95983 AC092436.1-201ENST00000506450 503 ntBASIC1.84□□□□□ -2.11
MBD3O95983 ARL2BPP4-201ENST00000506854 471 ntBASIC1.84□□□□□ -2.11
MBD3O95983 AL391840.1-201ENST00000571144 367 ntBASIC1.84□□□□□ -2.11
MBD3O95983 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.84□□□□□ -2.11
MBD3O95983 AC091805.2-201ENST00000603848 235 ntBASIC1.84□□□□□ -2.11
MBD3O95983 RMST_6.1-201ENST00000611980 203 ntBASIC1.84□□□□□ -2.11
MBD3O95983 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
MBD3O95983 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
MBD3O95983 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
MBD3O95983 AP000648.3-201ENST00000623539 4507 ntBASIC1.83□□□□□ -2.12
MBD3O95983 snoU2_19.1-201ENST00000362361 80 ntBASIC1.83□□□□□ -2.12
MBD3O95983 RNU6-37P-201ENST00000362692 107 ntBASIC1.83□□□□□ -2.12
MBD3O95983 Y_RNA.99-201ENST00000363138 105 ntBASIC1.83□□□□□ -2.12
MBD3O95983 RNU6-11P-201ENST00000364234 107 ntBASIC1.83□□□□□ -2.12
MBD3O95983 RNU6-25P-201ENST00000383873 107 ntBASIC1.83□□□□□ -2.12
MBD3O95983 RNU6-1-201ENST00000383898 107 ntBASIC1.83□□□□□ -2.12
MBD3O95983 RNU6-142P-201ENST00000384019 107 ntBASIC1.83□□□□□ -2.12
MBD3O95983 RNU6-1103P-201ENST00000384150 107 ntBASIC1.83□□□□□ -2.12
MBD3O95983 RNU6-48P-201ENST00000384161 107 ntBASIC1.83□□□□□ -2.12
MBD3O95983 RNU6-36P-201ENST00000384172 107 ntBASIC1.83□□□□□ -2.12
MBD3O95983 RNU6-4P-201ENST00000384205 107 ntBASIC1.83□□□□□ -2.12
MBD3O95983 RNU6-5P-201ENST00000384238 107 ntBASIC1.83□□□□□ -2.12
MBD3O95983 RNU6-3P-201ENST00000384314 107 ntBASIC1.83□□□□□ -2.12
MBD3O95983 SNORD116-8-201ENST00000384365 95 ntBASIC1.83□□□□□ -2.12
MBD3O95983 RNU6-16P-201ENST00000384385 107 ntBASIC1.83□□□□□ -2.12
MBD3O95983 RNU6-15P-201ENST00000384534 107 ntBASIC1.83□□□□□ -2.12
MBD3O95983 RNU6-2-201ENST00000384627 107 ntBASIC1.83□□□□□ -2.12
MBD3O95983 RNU6-29P-201ENST00000384637 107 ntBASIC1.83□□□□□ -2.12
MBD3O95983 RNU6-9-201ENST00000384776 107 ntBASIC1.83□□□□□ -2.12
MBD3O95983 RNU6-33P-201ENST00000384793 107 ntBASIC1.83□□□□□ -2.12
MBD3O95983 MIR320A-201ENST00000385302 82 ntBASIC1.83□□□□□ -2.12
MBD3O95983 SNORD70.1-201ENST00000391007 85 ntBASIC1.83□□□□□ -2.12
MBD3O95983 AL356432.1-201ENST00000405809 419 ntBASIC1.83□□□□□ -2.12
MBD3O95983 EIF4EP2-201ENST00000422816 654 ntBASIC1.83□□□□□ -2.12
MBD3O95983 AL590556.1-201ENST00000423231 483 ntBASIC1.83□□□□□ -2.12
MBD3O95983 FDX1P2-201ENST00000450769 375 ntBASIC1.83□□□□□ -2.12
MBD3O95983 RPS27AP8-201ENST00000452665 445 ntBASIC1.83□□□□□ -2.12
MBD3O95983 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.83□□□□□ -2.12
MBD3O95983 AC132942.1-201ENST00000486753 483 ntBASIC1.83□□□□□ -2.12
MBD3O95983 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.83□□□□□ -2.12
MBD3O95983 RNU6-430P-201ENST00000517078 107 ntBASIC1.83□□□□□ -2.12
MBD3O95983 SNORA25.17-201ENST00000517184 124 ntBASIC1.83□□□□□ -2.12
MBD3O95983 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.83□□□□□ -2.12
MBD3O95983 AP001893.2-201ENST00000526949 202 ntBASIC1.83□□□□□ -2.12
MBD3O95983 AP005639.2-201ENST00000527592 928 ntBASIC1.83□□□□□ -2.12
MBD3O95983 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.83□□□□□ -2.12
MBD3O95983 AC103987.3-201ENST00000582071 292 ntBASIC1.83□□□□□ -2.12
MBD3O95983 RNU6-6P-201ENST00000606623 107 ntBASIC1.83□□□□□ -2.12
MBD3O95983 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.83□□□□□ -2.12
MBD3O95983 AC013412.1-201ENST00000610687 192 ntBASIC1.83□□□□□ -2.12
MBD3O95983 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
MBD3O95983 AC087241.4-201ENST00000612441 480 ntBASIC1.83□□□□□ -2.12
MBD3O95983 AL590808.1-201ENST00000618696 141 ntBASIC1.83□□□□□ -2.12
MBD3O95983 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.83□□□□□ -2.12
MBD3O95983 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
MBD3O95983 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
MBD3O95983 SNORA8-201ENST00000384574 139 ntBASIC1.82□□□□□ -2.12
MBD3O95983 RNU6-997P-201ENST00000384725 107 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms