Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 MIR6513-201ENST00000621188 64 ntBASIC0.09□□□□□ -2.4
SIX6O95475 AC244015.1-201ENST00000622301 99 ntBASIC0.09□□□□□ -2.4
SIX6O95475 SNORA80D-201ENST00000384488 135 ntBASIC0.08□□□□□ -2.4
SIX6O95475 RNU6-952P-201ENST00000391164 108 ntBASIC0.08□□□□□ -2.4
SIX6O95475 ARL5AP1-201ENST00000418991 388 ntBASIC0.08□□□□□ -2.4
SIX6O95475 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.08□□□□□ -2.4
SIX6O95475 USP9YP14-201ENST00000430663 563 ntBASIC0.08□□□□□ -2.4
SIX6O95475 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.08□□□□□ -2.4
SIX6O95475 AC073910.1-201ENST00000445047 438 ntBASIC0.08□□□□□ -2.4
SIX6O95475 ELOCP30-201ENST00000447108 299 ntBASIC0.08□□□□□ -2.4
SIX6O95475 TPRKBP1-201ENST00000456243 481 ntBASIC0.08□□□□□ -2.4
SIX6O95475 RNU7-136P-201ENST00000458819 69 ntBASIC0.08□□□□□ -2.4
SIX6O95475 AC105758.1-201ENST00000506038 399 ntBASIC0.08□□□□□ -2.4
SIX6O95475 AC022493.2-201ENST00000506122 481 ntBASIC0.08□□□□□ -2.4
SIX6O95475 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.08□□□□□ -2.4
SIX6O95475 SNORA76.2-201ENST00000517095 137 ntBASIC0.08□□□□□ -2.4
SIX6O95475 AC023632.1-201ENST00000518463 375 ntBASIC0.08□□□□□ -2.4
SIX6O95475 SUMO2P16-201ENST00000519475 264 ntBASIC0.08□□□□□ -2.4
SIX6O95475 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.08□□□□□ -2.4
SIX6O95475 CR383656.8-201ENST00000549046 145 ntBASIC0.08□□□□□ -2.4
SIX6O95475 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.08□□□□□ -2.4
SIX6O95475 AP002906.1-201ENST00000603405 233 ntBASIC0.08□□□□□ -2.4
SIX6O95475 AL031281.1-201ENST00000604049 488 ntBASIC0.08□□□□□ -2.4
SIX6O95475 AC012557.2-201ENST00000605919 418 ntBASIC0.08□□□□□ -2.4
SIX6O95475 AC092106.3-201ENST00000611308 722 ntBASIC0.08□□□□□ -2.4
SIX6O95475 AC010975.3-201ENST00000618727 978 ntBASIC0.08□□□□□ -2.4
SIX6O95475 AC007792.1-201ENST00000623023 402 ntBASIC0.08□□□□□ -2.4
SIX6O95475 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
SIX6O95475 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.08□□□□□ -2.4
SIX6O95475 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.07□□□□□ -2.4
SIX6O95475 SNORD3E-201ENST00000362899 217 ntBASIC0.07□□□□□ -2.4
SIX6O95475 RNU1-96P-201ENST00000364163 162 ntBASIC0.07□□□□□ -2.4
SIX6O95475 SNORA4.2-201ENST00000365313 147 ntBASIC0.07□□□□□ -2.4
SIX6O95475 RNU6-932P-201ENST00000391108 106 ntBASIC0.07□□□□□ -2.4
SIX6O95475 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.07□□□□□ -2.4
SIX6O95475 MIR548J-201ENST00000408833 112 ntBASIC0.07□□□□□ -2.4
SIX6O95475 RNA5SP390-201ENST00000410191 113 ntBASIC0.07□□□□□ -2.4
SIX6O95475 AC011233.1-201ENST00000422812 283 ntBASIC0.07□□□□□ -2.4
SIX6O95475 SNRPEP8-201ENST00000442866 260 ntBASIC0.07□□□□□ -2.4
SIX6O95475 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.07□□□□□ -2.4
SIX6O95475 RNU7-34P-201ENST00000459394 64 ntBASIC0.07□□□□□ -2.4
SIX6O95475 RPL39P36-201ENST00000490784 156 ntBASIC0.07□□□□□ -2.4
SIX6O95475 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.07□□□□□ -2.4
SIX6O95475 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.07□□□□□ -2.4
SIX6O95475 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.07□□□□□ -2.4
SIX6O95475 AC060771.1-201ENST00000582031 164 ntBASIC0.07□□□□□ -2.4
SIX6O95475 MIR6504-201ENST00000613520 61 ntBASIC0.07□□□□□ -2.4
SIX6O95475 AL138726.1-201ENST00000614873 333 ntBASIC0.07□□□□□ -2.4
SIX6O95475 AL359757.2-201ENST00000624309 274 ntBASIC0.07□□□□□ -2.4
SIX6O95475 AL359740.1-201ENST00000624340 592 ntBASIC0.07□□□□□ -2.4
SIX6O95475 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.07□□□□□ -2.4
SIX6O95475 SNORD3E-202ENST00000627253 216 ntBASIC0.07□□□□□ -2.4
SIX6O95475 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.07□□□□□ -2.4
SIX6O95475 AL512643.1-201ENST00000635735 524 ntBASIC0.07□□□□□ -2.4
SIX6O95475 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.06□□□□□ -2.4
SIX6O95475 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
SIX6O95475 MIRLET7D-201ENST00000362263 87 ntBASIC0.06□□□□□ -2.4
SIX6O95475 SNORD114-22-201ENST00000365423 72 ntBASIC0.06□□□□□ -2.4
SIX6O95475 RNU6-1335P-201ENST00000365426 107 ntBASIC0.06□□□□□ -2.4
SIX6O95475 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
SIX6O95475 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.06□□□□□ -2.4
SIX6O95475 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.06□□□□□ -2.4
SIX6O95475 FABP5P4-201ENST00000437203 171 ntBASIC0.06□□□□□ -2.4
SIX6O95475 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.06□□□□□ -2.4
SIX6O95475 SNRPGP1-201ENST00000553864 222 ntBASIC0.06□□□□□ -2.4
SIX6O95475 AL133153.1-201ENST00000557756 303 ntBASIC0.06□□□□□ -2.4
SIX6O95475 AC090330.1-201ENST00000588646 764 ntBASIC0.06□□□□□ -2.4
SIX6O95475 AC090625.1-201ENST00000357130 210 ntBASIC0.05□□□□□ -2.4
SIX6O95475 U3.9-201ENST00000363823 204 ntBASIC0.05□□□□□ -2.4
SIX6O95475 MIR301A-201ENST00000385261 86 ntBASIC0.05□□□□□ -2.4
SIX6O95475 MIR1276-201ENST00000408707 83 ntBASIC0.05□□□□□ -2.4
SIX6O95475 MTCO3P41-201ENST00000414801 328 ntBASIC0.05□□□□□ -2.4
SIX6O95475 AL590623.1-201ENST00000427864 105 ntBASIC0.05□□□□□ -2.4
SIX6O95475 MTND4P25-201ENST00000441039 533 ntBASIC0.05□□□□□ -2.4
SIX6O95475 RPEP5-201ENST00000441137 268 ntBASIC0.05□□□□□ -2.4
SIX6O95475 AL606662.1-201ENST00000445763 553 ntBASIC0.05□□□□□ -2.4
SIX6O95475 RPS26P48-201ENST00000491713 339 ntBASIC0.05□□□□□ -2.4
SIX6O95475 AC091435.1-201ENST00000505442 584 ntBASIC0.05□□□□□ -2.4
SIX6O95475 MTND2P33-201ENST00000506452 1031 ntBASIC0.05□□□□□ -2.4
SIX6O95475 AC010587.2-201ENST00000511727 448 ntBASIC0.05□□□□□ -2.4
SIX6O95475 AC092325.1-201ENST00000566449 554 ntBASIC0.05□□□□□ -2.4
SIX6O95475 MIR4711-201ENST00000578274 70 ntBASIC0.05□□□□□ -2.4
SIX6O95475 MIR4452-201ENST00000583004 71 ntBASIC0.05□□□□□ -2.4
SIX6O95475 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.05□□□□□ -2.4
SIX6O95475 AL360219.1-201ENST00000610230 366 ntBASIC0.05□□□□□ -2.4
SIX6O95475 AC021506.2-201ENST00000612354 169 ntBASIC0.05□□□□□ -2.4
SIX6O95475 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.05□□□□□ -2.4
SIX6O95475 AL159153.1-201ENST00000619688 317 ntBASIC0.05□□□□□ -2.4
SIX6O95475 AL159152.1-201ENST00000635019 2587 ntBASIC0.05□□□□□ -2.4
SIX6O95475 AC107982.1-201ENST00000507171 1300 ntBASIC0.05□□□□□ -2.4
SIX6O95475 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
SIX6O95475 RNU6-950P-201ENST00000384651 107 ntBASIC0.04□□□□□ -2.4
SIX6O95475 SNORD99-201ENST00000408612 74 ntBASIC0.04□□□□□ -2.4
SIX6O95475 RNU6-1025P-201ENST00000410629 104 ntBASIC0.04□□□□□ -2.4
SIX6O95475 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.04□□□□□ -2.4
SIX6O95475 AL121578.1-201ENST00000428051 892 ntBASIC0.04□□□□□ -2.4
SIX6O95475 GXYLT1P1-201ENST00000446657 490 ntBASIC0.04□□□□□ -2.4
SIX6O95475 RPS20P10-201ENST00000451209 253 ntBASIC0.04□□□□□ -2.4
SIX6O95475 MRPL42P4-201ENST00000453267 443 ntBASIC0.04□□□□□ -2.4
SIX6O95475 AL162395.1-201ENST00000457882 422 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms