Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 LINC02555-201ENST00000563933 1951 ntBASIC1.25□□□□□ -2.21
UPK1BO75841 AC091812.1-201ENST00000432235 1948 ntBASIC1.25□□□□□ -2.21
UPK1BO75841 MTND4P4-201ENST00000439033 1366 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 RNU6-336P-201ENST00000364891 107 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 Y_RNA.332-201ENST00000365271 113 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.24□□□□□ -2.21
UPK1BO75841 RNU6-26P-201ENST00000383985 107 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 Y_RNA.510-201ENST00000384511 114 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 AL590135.1-201ENST00000422215 156 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 AC019205.3-201ENST00000424573 156 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 SDAD1P3-201ENST00000427380 333 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.24□□□□□ -2.21
UPK1BO75841 AC010975.2-201ENST00000427781 588 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.24□□□□□ -2.21
UPK1BO75841 SNRPEP8-201ENST00000442866 260 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 AC016700.2-201ENST00000446011 156 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 FTH1P25-201ENST00000447665 469 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.24□□□□□ -2.21
UPK1BO75841 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.24□□□□□ -2.21
UPK1BO75841 RNU7-125P-201ENST00000458760 62 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 AC015911.1-201ENST00000495111 156 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 AC114801.2-201ENST00000503825 781 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 RNU6-1129P-201ENST00000515964 104 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 RNU6-410P-201ENST00000517006 107 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.24□□□□□ -2.21
UPK1BO75841 AC068338.1-201ENST00000565567 176 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 AC008752.3-201ENST00000588113 712 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.24□□□□□ -2.21
UPK1BO75841 AC234772.3-201ENST00000602277 528 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 AP001485.1-201ENST00000604799 199 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 RMST_6.1-201ENST00000611980 203 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.24□□□□□ -2.21
UPK1BO75841 AL050303.3-201ENST00000613704 284 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 AC008250.2-201ENST00000615261 205 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 IGHVIII-44-202ENST00000636235 289 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 AC241585.2-209ENST00000638217 143 ntBASIC1.24□□□□□ -2.21
UPK1BO75841 MIR340-201ENST00000362125 95 ntBASIC1.23□□□□□ -2.21
UPK1BO75841 MIR1-2-201ENST00000384961 85 ntBASIC1.23□□□□□ -2.21
UPK1BO75841 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.23□□□□□ -2.21
UPK1BO75841 Z98742.3-201ENST00000418637 326 ntBASIC1.23□□□□□ -2.21
UPK1BO75841 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.23□□□□□ -2.21
UPK1BO75841 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.23□□□□□ -2.21
UPK1BO75841 MTND1P30-201ENST00000441241 901 ntBASIC1.23□□□□□ -2.21
UPK1BO75841 AL353705.4-201ENST00000449661 238 ntBASIC1.23□□□□□ -2.21
UPK1BO75841 ATP5EP1-201ENST00000510257 156 ntBASIC1.23□□□□□ -2.21
UPK1BO75841 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.23□□□□□ -2.21
UPK1BO75841 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.23□□□□□ -2.21
UPK1BO75841 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
UPK1BO75841 AC087441.2-201ENST00000529141 262 ntBASIC1.23□□□□□ -2.21
UPK1BO75841 AC023050.3-201ENST00000541142 333 ntBASIC1.23□□□□□ -2.21
UPK1BO75841 AL512310.1-201ENST00000548639 172 ntBASIC1.23□□□□□ -2.21
UPK1BO75841 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.23□□□□□ -2.21
UPK1BO75841 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
UPK1BO75841 AC109446.1-201ENST00000566172 220 ntBASIC1.23□□□□□ -2.21
UPK1BO75841 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.23□□□□□ -2.21
UPK1BO75841 AC090616.2-202ENST00000584248 222 ntBASIC1.23□□□□□ -2.21
UPK1BO75841 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.23□□□□□ -2.21
UPK1BO75841 AC005786.1-201ENST00000588553 154 ntBASIC1.23□□□□□ -2.21
UPK1BO75841 AL590229.1-201ENST00000603497 542 ntBASIC1.23□□□□□ -2.21
UPK1BO75841 AC092354.1-201ENST00000606057 376 ntBASIC1.23□□□□□ -2.21
UPK1BO75841 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.23□□□□□ -2.21
UPK1BO75841 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.23□□□□□ -2.21
UPK1BO75841 AC006026.1-201ENST00000444025 1803 ntBASIC1.23□□□□□ -2.21
UPK1BO75841 AL161722.3-201ENST00000605789 2983 ntBASIC1.23□□□□□ -2.21
UPK1BO75841 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
UPK1BO75841 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.22□□□□□ -2.21
UPK1BO75841 MTND4P23-201ENST00000447723 1363 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
UPK1BO75841 RNU4-82P-201ENST00000362443 140 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 RNU6-112P-201ENST00000363599 104 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 RNU6-142P-201ENST00000384019 107 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 RNU6-74P-201ENST00000384235 107 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 MTCO3P41-201ENST00000414801 328 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.22□□□□□ -2.21
UPK1BO75841 RPL21P111-201ENST00000418453 477 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 AC013410.2-201ENST00000422627 201 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 AC010099.3-201ENST00000423896 409 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 AC139712.2-201ENST00000424302 339 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.22□□□□□ -2.21
UPK1BO75841 RPL31P35-201ENST00000431058 377 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 GPR143P-201ENST00000434155 205 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 AC244670.1-201ENST00000436879 112 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.22□□□□□ -2.21
UPK1BO75841 AL022238.1-201ENST00000442557 355 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 RPS29P15-201ENST00000458329 171 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.22□□□□□ -2.21
UPK1BO75841 AC022447.4-201ENST00000504053 364 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 YWHAEP4-201ENST00000505390 198 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 AC097473.1-201ENST00000508142 408 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 MTCO3P7-201ENST00000510008 774 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.22□□□□□ -2.21
UPK1BO75841 RNA5SP182-201ENST00000516064 82 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.22□□□□□ -2.21
UPK1BO75841 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.22□□□□□ -2.21
UPK1BO75841 ZNF321P-202ENST00000550843 495 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.22□□□□□ -2.21
UPK1BO75841 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.22□□□□□ -2.21
UPK1BO75841 MIR4775-201ENST00000581168 75 ntBASIC1.22□□□□□ -2.21
UPK1BO75841 AC012507.3-201ENST00000603556 477 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms