Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RNU6-793P-201ENST00000384233 104 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 RNU6-837P-201ENST00000391056 108 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC-0.19□□□□□ -2.44
USH2AO75445 ZNF736P11Y-201ENST00000442535 1213 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-0.19□□□□□ -2.44
USH2AO75445 ZNF736P6Y-201ENST00000447526 1213 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 RNU6-420P-201ENST00000458780 107 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 RNU7-159P-201ENST00000459284 62 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 AC010627.1-201ENST00000503819 1294 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 PDCD5P2-201ENST00000507570 312 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 RNU6-917P-201ENST00000516294 104 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 RNU6-586P-201ENST00000517265 104 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 POLR3GP2-201ENST00000588366 668 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 AC010900.2-201ENST00000604508 210 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 AL022345.1-201ENST00000607292 135 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 AC006963.1-201ENST00000624003 1052 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.19□□□□□ -2.44
USH2AO75445 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 RNA5SP125-201ENST00000364843 120 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 RNU6-439P-201ENST00000384188 106 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 RNU6-1065P-201ENST00000384513 106 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 Y_RNA.566-201ENST00000384735 101 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 AL591034.2-201ENST00000402839 359 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 AL355796.1-201ENST00000406706 323 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 SNX2P2-201ENST00000424553 323 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 HLA-S-202ENST00000425174 53 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 MTATP6P16-201ENST00000434543 526 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 NFU1P2-201ENST00000448700 469 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC-0.19□□□□□ -2.44
USH2AO75445 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC-0.19□□□□□ -2.44
USH2AO75445 CYP3A52P-201ENST00000563326 91 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 AL670379.3-201ENST00000605040 251 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 AF129408.1-201ENST00000608767 431 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 AC009268.2-201ENST00000621925 457 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.19□□□□□ -2.44
USH2AO75445 RPS15AP38-201ENST00000413110 372 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 AL353621.1-201ENST00000418219 243 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 AL365496.1-201ENST00000426885 215 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.19□□□□□ -2.44
USH2AO75445 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.19□□□□□ -2.44
USH2AO75445 RNU7-56P-201ENST00000458744 62 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 AC022447.1-201ENST00000515358 464 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 RNU6-1092P-201ENST00000516955 87 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 SNORA31.22-201ENST00000517204 135 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC-0.19□□□□□ -2.44
USH2AO75445 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC-0.19□□□□□ -2.44
USH2AO75445 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC-0.19□□□□□ -2.44
USH2AO75445 AC011451.2-201ENST00000604303 598 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 AC005021.1-201ENST00000608730 355 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 MIR8074-201ENST00000615081 81 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 AC078938.1-201ENST00000620993 318 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 MTND5P18-201ENST00000445624 1801 ntBASIC-0.19□□□□□ -2.44
USH2AO75445 SNORD114-12-201ENST00000365400 75 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC-0.2□□□□□ -2.44
USH2AO75445 AC098869.1-201ENST00000481627 292 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC-0.2□□□□□ -2.44
USH2AO75445 AC027449.1-201ENST00000608890 407 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AL133445.2-201ENST00000611191 527 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AC091965.5-201ENST00000624785 342 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC-0.2□□□□□ -2.44
USH2AO75445 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC-0.2□□□□□ -2.44
USH2AO75445 MIR92A2-201ENST00000385299 75 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 SNORD83B-201ENST00000386745 93 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 MIR942-201ENST00000401111 86 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.2□□□□□ -2.44
USH2AO75445 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC-0.2□□□□□ -2.44
USH2AO75445 FGF7P5-201ENST00000441829 291 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 RPL36AP48-201ENST00000485521 314 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AC113410.1-201ENST00000505029 247 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AC091860.1-201ENST00000505723 432 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.2□□□□□ -2.44
USH2AO75445 SNORA31.10-201ENST00000516482 106 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 RNA5SP168-201ENST00000516642 112 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC-0.2□□□□□ -2.44
USH2AO75445 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC-0.2□□□□□ -2.44
USH2AO75445 MIR4743-201ENST00000584576 69 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AL391001.1-201ENST00000602747 715 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AC105148.1-201ENST00000604961 409 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AC242628.1-201ENST00000606810 391 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AC092125.1-201ENST00000562568 1995 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC-0.2□□□□□ -2.44
USH2AO75445 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 MIR1298-201ENST00000408783 112 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.2□□□□□ -2.44
USH2AO75445 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC-0.2□□□□□ -2.44
USH2AO75445 BUD31P2-201ENST00000449374 300 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 RPL7P55-201ENST00000450522 746 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-0.2□□□□□ -2.44
USH2AO75445 PNPLA4P1-201ENST00000458328 305 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 HMGN2P26-201ENST00000463169 339 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AC011005.2-201ENST00000487324 359 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 RPS26P48-201ENST00000491713 339 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 AC026616.1-201ENST00000523157 525 ntBASIC-0.2□□□□□ -2.44
USH2AO75445 CASP1-212ENST00000531166 300 ntTSL 5 BASIC-0.2□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms