Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 Y_RNA.124-201ENST00000363339 93 ntBASIC4.57□□□□□ -1.68
GFRA3O60609 SNORA33-201ENST00000363664 130 ntBASIC4.57□□□□□ -1.68
GFRA3O60609 RNU1-132P-201ENST00000364300 164 ntBASIC4.57□□□□□ -1.68
GFRA3O60609 RNA5SP22-201ENST00000365393 109 ntBASIC4.57□□□□□ -1.68
GFRA3O60609 SNORA1-201ENST00000384107 130 ntBASIC4.57□□□□□ -1.68
GFRA3O60609 MIR34B-201ENST00000385076 84 ntBASIC4.57□□□□□ -1.68
GFRA3O60609 RNU6-816P-201ENST00000390914 107 ntBASIC4.57□□□□□ -1.68
GFRA3O60609 RNU6-1268P-201ENST00000391214 107 ntBASIC4.57□□□□□ -1.68
GFRA3O60609 RNU6-1239P-201ENST00000391310 107 ntBASIC4.57□□□□□ -1.68
GFRA3O60609 RPL32P35-201ENST00000415214 394 ntBASIC4.57□□□□□ -1.68
GFRA3O60609 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
GFRA3O60609 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
GFRA3O60609 RNU6-523P-201ENST00000516304 54 ntBASIC4.57□□□□□ -1.68
GFRA3O60609 RNU7-116P-201ENST00000516940 62 ntBASIC4.57□□□□□ -1.68
GFRA3O60609 AC108738.1-201ENST00000603703 237 ntBASIC4.57□□□□□ -1.68
GFRA3O60609 AC002064.3-201ENST00000623448 346 ntBASIC4.57□□□□□ -1.68
GFRA3O60609 MIR548BB-201ENST00000626714 66 ntBASIC4.57□□□□□ -1.68
GFRA3O60609 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.57□□□□□ -1.68
GFRA3O60609 MIR3529-201ENST00000637713 78 ntBASIC4.57□□□□□ -1.68
GFRA3O60609 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.57□□□□□ -1.68
GFRA3O60609 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
GFRA3O60609 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.56□□□□□ -1.68
GFRA3O60609 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
GFRA3O60609 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
GFRA3O60609 GVINP1-202ENST00000531871 7271 ntBASIC4.56□□□□□ -1.68
GFRA3O60609 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
GFRA3O60609 AL022311.1-201ENST00000623726 19416 ntBASIC4.56□□□□□ -1.68
GFRA3O60609 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
GFRA3O60609 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
GFRA3O60609 SNORA70.6-201ENST00000383934 134 ntBASIC4.56□□□□□ -1.68
GFRA3O60609 RNY1P6-201ENST00000384193 109 ntBASIC4.56□□□□□ -1.68
GFRA3O60609 SNORA5.1-201ENST00000384275 131 ntBASIC4.56□□□□□ -1.68
GFRA3O60609 SNORA26-201ENST00000391286 122 ntBASIC4.56□□□□□ -1.68
GFRA3O60609 MIR1912-201ENST00000410389 80 ntBASIC4.56□□□□□ -1.68
GFRA3O60609 RNU4-69P-201ENST00000410677 143 ntBASIC4.56□□□□□ -1.68
GFRA3O60609 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.56□□□□□ -1.68
GFRA3O60609 COX6CP13-201ENST00000428703 226 ntBASIC4.56□□□□□ -1.68
GFRA3O60609 GEMIN8P3-201ENST00000445417 720 ntBASIC4.56□□□□□ -1.68
GFRA3O60609 AC125388.1-201ENST00000459631 156 ntBASIC4.56□□□□□ -1.68
GFRA3O60609 RNU6-1337P-201ENST00000516525 95 ntBASIC4.56□□□□□ -1.68
GFRA3O60609 RNU6-1149P-201ENST00000516810 97 ntBASIC4.56□□□□□ -1.68
GFRA3O60609 SCARNA15-202ENST00000516881 127 ntBASIC4.56□□□□□ -1.68
GFRA3O60609 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.56□□□□□ -1.68
GFRA3O60609 MIR4712-201ENST00000583750 82 ntBASIC4.56□□□□□ -1.68
GFRA3O60609 SNORD11B-201ENST00000607707 90 ntBASIC4.56□□□□□ -1.68
GFRA3O60609 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
GFRA3O60609 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GFRA3O60609 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.56□□□□□ -1.68
GFRA3O60609 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.56□□□□□ -1.68
GFRA3O60609 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
GFRA3O60609 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
GFRA3O60609 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.56□□□□□ -1.68
GFRA3O60609 FAM35CP-201ENST00000554755 2470 ntBASIC4.55□□□□□ -1.68
GFRA3O60609 AP001029.2-203ENST00000589795 4910 ntBASIC4.55□□□□□ -1.68
GFRA3O60609 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
GFRA3O60609 AC083899.1-201ENST00000454465 3819 ntBASIC4.55□□□□□ -1.68
GFRA3O60609 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.55□□□□□ -1.68
GFRA3O60609 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.55□□□□□ -1.68
GFRA3O60609 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GFRA3O60609 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.55□□□□□ -1.68
GFRA3O60609 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.55□□□□□ -1.68
GFRA3O60609 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
GFRA3O60609 RNU6-1292P-201ENST00000383856 107 ntBASIC4.55□□□□□ -1.68
GFRA3O60609 MIR1265-201ENST00000408444 86 ntBASIC4.55□□□□□ -1.68
GFRA3O60609 RNU2-68P-201ENST00000410878 191 ntBASIC4.55□□□□□ -1.68
GFRA3O60609 RPL36AP10-201ENST00000421785 322 ntBASIC4.55□□□□□ -1.68
GFRA3O60609 AC009414.1-201ENST00000427200 443 ntBASIC4.55□□□□□ -1.68
GFRA3O60609 AL356867.1-201ENST00000429623 299 ntBASIC4.55□□□□□ -1.68
GFRA3O60609 AL049873.1-201ENST00000480540 376 ntBASIC4.55□□□□□ -1.68
GFRA3O60609 RPS26P48-201ENST00000491713 339 ntBASIC4.55□□□□□ -1.68
GFRA3O60609 RN7SL441P-201ENST00000492388 296 ntBASIC4.55□□□□□ -1.68
GFRA3O60609 AC109329.2-201ENST00000519658 482 ntBASIC4.55□□□□□ -1.68
GFRA3O60609 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.55□□□□□ -1.68
GFRA3O60609 CR383656.8-201ENST00000549046 145 ntBASIC4.55□□□□□ -1.68
GFRA3O60609 LINC00933-203ENST00000559812 219 ntBASIC4.55□□□□□ -1.68
GFRA3O60609 AC105129.1-201ENST00000560250 297 ntBASIC4.55□□□□□ -1.68
GFRA3O60609 MIR4777-201ENST00000583710 86 ntBASIC4.55□□□□□ -1.68
GFRA3O60609 AL139124.1-201ENST00000609123 421 ntBASIC4.55□□□□□ -1.68
GFRA3O60609 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
GFRA3O60609 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GFRA3O60609 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
GFRA3O60609 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
GFRA3O60609 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
GFRA3O60609 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.55□□□□□ -1.68
GFRA3O60609 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
GFRA3O60609 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.54□□□□□ -1.68
GFRA3O60609 ABCC13-202ENST00000463099 3842 ntBASIC4.54□□□□□ -1.68
GFRA3O60609 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
GFRA3O60609 AL031595.2-201ENST00000624215 19071 ntBASIC4.54□□□□□ -1.68
GFRA3O60609 AC021146.4-201ENST00000309229 279 ntBASIC4.54□□□□□ -1.68
GFRA3O60609 SNORD114-7-201ENST00000362520 77 ntBASIC4.54□□□□□ -1.68
GFRA3O60609 RNU6-1209P-201ENST00000363655 107 ntBASIC4.54□□□□□ -1.68
GFRA3O60609 Y_RNA.191-201ENST00000363972 113 ntBASIC4.54□□□□□ -1.68
GFRA3O60609 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
GFRA3O60609 MIR659-201ENST00000384963 97 ntBASIC4.54□□□□□ -1.68
GFRA3O60609 U3.26-201ENST00000391236 204 ntBASIC4.54□□□□□ -1.68
GFRA3O60609 MRPL35P3-201ENST00000421557 364 ntBASIC4.54□□□□□ -1.68
GFRA3O60609 AL645608.4-201ENST00000423619 154 ntBASIC4.54□□□□□ -1.68
GFRA3O60609 AC090602.1-201ENST00000469695 252 ntBASIC4.54□□□□□ -1.68
GFRA3O60609 RPL36AP21-201ENST00000490372 323 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms