Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.82□□□□□ -2.28
SSNA1O43805 AC106858.1-201ENST00000637497 429 ntBASIC0.82□□□□□ -2.28
SSNA1O43805 AC073343.1-201ENST00000328239 651 ntBASIC0.81□□□□□ -2.28
SSNA1O43805 SNORA29-201ENST00000384183 140 ntBASIC0.81□□□□□ -2.28
SSNA1O43805 RNU6-1176P-201ENST00000390955 107 ntBASIC0.81□□□□□ -2.28
SSNA1O43805 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
SSNA1O43805 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.81□□□□□ -2.28
SSNA1O43805 CALM2P2-201ENST00000428512 440 ntBASIC0.81□□□□□ -2.28
SSNA1O43805 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.81□□□□□ -2.28
SSNA1O43805 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.81□□□□□ -2.28
SSNA1O43805 AC022447.4-201ENST00000504053 364 ntBASIC0.81□□□□□ -2.28
SSNA1O43805 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.81□□□□□ -2.28
SSNA1O43805 MIR3664-201ENST00000579074 99 ntBASIC0.81□□□□□ -2.28
SSNA1O43805 MIR4672-201ENST00000583126 81 ntBASIC0.81□□□□□ -2.28
SSNA1O43805 BNIP3P8-201ENST00000597863 560 ntBASIC0.81□□□□□ -2.28
SSNA1O43805 AC012507.3-201ENST00000603556 477 ntBASIC0.81□□□□□ -2.28
SSNA1O43805 AL158042.1-201ENST00000605338 460 ntBASIC0.81□□□□□ -2.28
SSNA1O43805 AC013244.3-201ENST00000605614 388 ntBASIC0.81□□□□□ -2.28
SSNA1O43805 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SSNA1O43805 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.81□□□□□ -2.28
SSNA1O43805 AC068647.2-201ENST00000637380 353 ntBASIC0.81□□□□□ -2.28
SSNA1O43805 ANKRD20A9P-201ENST00000457997 2978 ntBASIC0.8□□□□□ -2.28
SSNA1O43805 RNU1-96P-201ENST00000364163 162 ntBASIC0.8□□□□□ -2.28
SSNA1O43805 RNU6-371P-201ENST00000364283 108 ntBASIC0.8□□□□□ -2.28
SSNA1O43805 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.8□□□□□ -2.28
SSNA1O43805 AC004965.1-201ENST00000413033 213 ntBASIC0.8□□□□□ -2.28
SSNA1O43805 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.8□□□□□ -2.28
SSNA1O43805 MTCYBP39-201ENST00000437562 491 ntBASIC0.8□□□□□ -2.28
SSNA1O43805 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.8□□□□□ -2.28
SSNA1O43805 PRPS1P1-201ENST00000445305 876 ntBASIC0.8□□□□□ -2.28
SSNA1O43805 HSPE1P13-201ENST00000451143 297 ntBASIC0.8□□□□□ -2.28
SSNA1O43805 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.8□□□□□ -2.28
SSNA1O43805 NDUFAF4P3-201ENST00000456468 525 ntBASIC0.8□□□□□ -2.28
SSNA1O43805 TOMM22P6-201ENST00000465035 409 ntBASIC0.8□□□□□ -2.28
SSNA1O43805 AL049829.1-201ENST00000465411 156 ntBASIC0.8□□□□□ -2.28
SSNA1O43805 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.8□□□□□ -2.28
SSNA1O43805 AC087883.1-201ENST00000551882 391 ntBASIC0.8□□□□□ -2.28
SSNA1O43805 AC109446.1-201ENST00000566172 220 ntBASIC0.8□□□□□ -2.28
SSNA1O43805 AC008088.1-201ENST00000580993 280 ntBASIC0.8□□□□□ -2.28
SSNA1O43805 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.8□□□□□ -2.28
SSNA1O43805 AL139286.2-201ENST00000606838 396 ntBASIC0.8□□□□□ -2.28
SSNA1O43805 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.8□□□□□ -2.28
SSNA1O43805 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.8□□□□□ -2.28
SSNA1O43805 SNORD56.2-201ENST00000363242 71 ntBASIC0.79□□□□□ -2.28
SSNA1O43805 RNU6-142P-201ENST00000384019 107 ntBASIC0.79□□□□□ -2.28
SSNA1O43805 C1DP2-201ENST00000418167 426 ntBASIC0.79□□□□□ -2.28
SSNA1O43805 ARL5AP1-201ENST00000418991 388 ntBASIC0.79□□□□□ -2.28
SSNA1O43805 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.79□□□□□ -2.28
SSNA1O43805 AC010531.2-201ENST00000465012 153 ntBASIC0.79□□□□□ -2.28
SSNA1O43805 SNRPGP7-201ENST00000469016 106 ntBASIC0.79□□□□□ -2.28
SSNA1O43805 AC104982.1-201ENST00000478775 574 ntBASIC0.79□□□□□ -2.28
SSNA1O43805 RNA5SP337-201ENST00000517007 109 ntBASIC0.79□□□□□ -2.28
SSNA1O43805 CYCSP23-201ENST00000519781 313 ntBASIC0.79□□□□□ -2.28
SSNA1O43805 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.79□□□□□ -2.28
SSNA1O43805 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.79□□□□□ -2.28
SSNA1O43805 AC136932.1-201ENST00000574771 208 ntBASIC0.79□□□□□ -2.28
SSNA1O43805 MIR3136-201ENST00000583498 78 ntBASIC0.79□□□□□ -2.28
SSNA1O43805 AC040896.1-201ENST00000613819 479 ntBASIC0.79□□□□□ -2.28
SSNA1O43805 AL157786.1-207ENST00000627771 695 ntBASIC0.79□□□□□ -2.28
SSNA1O43805 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.79□□□□□ -2.28
SSNA1O43805 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
SSNA1O43805 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
SSNA1O43805 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.78□□□□□ -2.28
SSNA1O43805 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
SSNA1O43805 RNU6-105P-201ENST00000363909 104 ntBASIC0.78□□□□□ -2.28
SSNA1O43805 RNU4-38P-201ENST00000364472 129 ntBASIC0.78□□□□□ -2.28
SSNA1O43805 SNORA4.2-201ENST00000365313 147 ntBASIC0.78□□□□□ -2.28
SSNA1O43805 MIR483-201ENST00000385070 76 ntBASIC0.78□□□□□ -2.28
SSNA1O43805 SNORA26.9-201ENST00000391322 122 ntBASIC0.78□□□□□ -2.28
SSNA1O43805 MTCYBP2-201ENST00000407745 171 ntBASIC0.78□□□□□ -2.28
SSNA1O43805 MTCO3P29-201ENST00000432119 779 ntBASIC0.78□□□□□ -2.28
SSNA1O43805 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.78□□□□□ -2.28
SSNA1O43805 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.78□□□□□ -2.28
SSNA1O43805 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.78□□□□□ -2.28
SSNA1O43805 ACA64.5-201ENST00000516207 127 ntBASIC0.78□□□□□ -2.28
SSNA1O43805 SNORA31.16-201ENST00000516773 139 ntBASIC0.78□□□□□ -2.28
SSNA1O43805 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.78□□□□□ -2.28
SSNA1O43805 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.78□□□□□ -2.28
SSNA1O43805 ZNF321P-202ENST00000550843 495 ntBASIC0.78□□□□□ -2.28
SSNA1O43805 AC021231.3-201ENST00000558497 370 ntBASIC0.78□□□□□ -2.28
SSNA1O43805 MIR4421-201ENST00000578133 69 ntBASIC0.78□□□□□ -2.28
SSNA1O43805 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.78□□□□□ -2.28
SSNA1O43805 AC008752.3-201ENST00000588113 712 ntBASIC0.78□□□□□ -2.28
SSNA1O43805 AC107304.1-201ENST00000604229 296 ntBASIC0.78□□□□□ -2.28
SSNA1O43805 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.78□□□□□ -2.28
SSNA1O43805 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.78□□□□□ -2.28
SSNA1O43805 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.78□□□□□ -2.28
SSNA1O43805 U4.7-201ENST00000638126 106 ntBASIC0.78□□□□□ -2.28
SSNA1O43805 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.78□□□□□ -2.28
SSNA1O43805 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
SSNA1O43805 MIR222-201ENST00000384992 110 ntBASIC0.77□□□□□ -2.29
SSNA1O43805 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
SSNA1O43805 AL117342.1-201ENST00000404861 406 ntBASIC0.77□□□□□ -2.29
SSNA1O43805 RNU6-757P-201ENST00000410334 100 ntBASIC0.77□□□□□ -2.29
SSNA1O43805 POLR2J4-204ENST00000418424 324 ntBASIC0.77□□□□□ -2.29
SSNA1O43805 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.77□□□□□ -2.29
SSNA1O43805 AC243964.1-201ENST00000441814 261 ntBASIC0.77□□□□□ -2.29
SSNA1O43805 AC073910.1-201ENST00000445047 438 ntBASIC0.77□□□□□ -2.29
SSNA1O43805 RPS4XP11-201ENST00000446897 772 ntBASIC0.77□□□□□ -2.29
SSNA1O43805 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms