Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 VN1R91P-201ENST00000594377 169 ntBASIC3.22□□□□□ -1.89
PROM1O43490 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PROM1O43490 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
PROM1O43490 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PROM1O43490 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
PROM1O43490 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
PROM1O43490 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PROM1O43490 RNU6-227P-201ENST00000362865 103 ntBASIC3.21□□□□□ -1.9
PROM1O43490 SNORD50.1-201ENST00000362987 71 ntBASIC3.21□□□□□ -1.9
PROM1O43490 RNU6-713P-201ENST00000384761 107 ntBASIC3.21□□□□□ -1.9
PROM1O43490 SNORA69.1-201ENST00000390904 137 ntBASIC3.21□□□□□ -1.9
PROM1O43490 U3.37-201ENST00000408528 213 ntBASIC3.21□□□□□ -1.9
PROM1O43490 RNA5SP494-201ENST00000410653 129 ntBASIC3.21□□□□□ -1.9
PROM1O43490 AC124916.1-201ENST00000444020 547 ntBASIC3.21□□□□□ -1.9
PROM1O43490 AC091179.1-201ENST00000461606 579 ntBASIC3.21□□□□□ -1.9
PROM1O43490 AC021205.2-201ENST00000480069 347 ntBASIC3.21□□□□□ -1.9
PROM1O43490 FCF1P8-201ENST00000510322 597 ntBASIC3.21□□□□□ -1.9
PROM1O43490 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.21□□□□□ -1.9
PROM1O43490 AC009812.2-201ENST00000517657 457 ntBASIC3.21□□□□□ -1.9
PROM1O43490 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.21□□□□□ -1.9
PROM1O43490 LINC00933-203ENST00000559812 219 ntBASIC3.21□□□□□ -1.9
PROM1O43490 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.21□□□□□ -1.9
PROM1O43490 MIR5696-201ENST00000578474 85 ntBASIC3.21□□□□□ -1.9
PROM1O43490 AC020895.1-201ENST00000595362 272 ntBASIC3.21□□□□□ -1.9
PROM1O43490 AC005046.1-201ENST00000608515 625 ntBASIC3.21□□□□□ -1.9
PROM1O43490 AC009318.2-201ENST00000610917 651 ntBASIC3.21□□□□□ -1.9
PROM1O43490 AL021879.1-201ENST00000611756 288 ntBASIC3.21□□□□□ -1.9
PROM1O43490 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.21□□□□□ -1.9
PROM1O43490 U2.1-201ENST00000618978 145 ntBASIC3.21□□□□□ -1.9
PROM1O43490 AC097372.5-201ENST00000623665 376 ntBASIC3.21□□□□□ -1.9
PROM1O43490 FAM35CP-201ENST00000554755 2470 ntBASIC3.21□□□□□ -1.9
PROM1O43490 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PROM1O43490 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
PROM1O43490 AC022336.2-201ENST00000568966 2538 ntBASIC3.21□□□□□ -1.9
PROM1O43490 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.21□□□□□ -1.9
PROM1O43490 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
PROM1O43490 RNU6-884P-201ENST00000363889 107 ntBASIC3.2□□□□□ -1.9
PROM1O43490 Y_RNA.188-201ENST00000363952 111 ntBASIC3.2□□□□□ -1.9
PROM1O43490 MIR128-1-201ENST00000384921 82 ntBASIC3.2□□□□□ -1.9
PROM1O43490 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
PROM1O43490 BTF3L4P2-201ENST00000392798 346 ntBASIC3.2□□□□□ -1.9
PROM1O43490 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.2□□□□□ -1.9
PROM1O43490 RNA5SP120-201ENST00000410900 112 ntBASIC3.2□□□□□ -1.9
PROM1O43490 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.2□□□□□ -1.9
PROM1O43490 CBX3P6-201ENST00000430257 527 ntBASIC3.2□□□□□ -1.9
PROM1O43490 DYNLT3P2-201ENST00000442517 295 ntBASIC3.2□□□□□ -1.9
PROM1O43490 OSTCP8-201ENST00000445117 448 ntBASIC3.2□□□□□ -1.9
PROM1O43490 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.2□□□□□ -1.9
PROM1O43490 AC006026.2-201ENST00000457376 180 ntBASIC3.2□□□□□ -1.9
PROM1O43490 AP001486.1-201ENST00000463339 476 ntBASIC3.2□□□□□ -1.9
PROM1O43490 RN7SL807P-201ENST00000470923 297 ntBASIC3.2□□□□□ -1.9
PROM1O43490 AL049873.1-201ENST00000480540 376 ntBASIC3.2□□□□□ -1.9
PROM1O43490 MIR2276-201ENST00000516886 89 ntBASIC3.2□□□□□ -1.9
PROM1O43490 RNU6-703P-201ENST00000516946 107 ntBASIC3.2□□□□□ -1.9
PROM1O43490 SNORA31.18-201ENST00000517043 134 ntBASIC3.2□□□□□ -1.9
PROM1O43490 RNU6-1271P-201ENST00000517049 105 ntBASIC3.2□□□□□ -1.9
PROM1O43490 AC107934.2-201ENST00000518653 310 ntBASIC3.2□□□□□ -1.9
PROM1O43490 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.2□□□□□ -1.9
PROM1O43490 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.2□□□□□ -1.9
PROM1O43490 AP004607.1-201ENST00000524456 203 ntBASIC3.2□□□□□ -1.9
PROM1O43490 AL590705.4-201ENST00000532209 134 ntBASIC3.2□□□□□ -1.9
PROM1O43490 MIR3668-201ENST00000582138 75 ntBASIC3.2□□□□□ -1.9
PROM1O43490 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.2□□□□□ -1.9
PROM1O43490 RPS29P30-201ENST00000600975 111 ntBASIC3.2□□□□□ -1.9
PROM1O43490 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PROM1O43490 AC099654.7-201ENST00000635788 2127 ntBASIC3.2□□□□□ -1.9
PROM1O43490 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
PROM1O43490 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
PROM1O43490 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PROM1O43490 AP003122.5-201ENST00000527668 3766 ntBASIC3.2□□□□□ -1.9
PROM1O43490 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
PROM1O43490 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
PROM1O43490 Z98749.2-208ENST00000381646 500 ntBASIC3.19□□□□□ -1.9
PROM1O43490 RNU1-73P-201ENST00000383971 164 ntBASIC3.19□□□□□ -1.9
PROM1O43490 Y_RNA.526-201ENST00000384572 110 ntBASIC3.19□□□□□ -1.9
PROM1O43490 RNU6-1222P-201ENST00000384615 107 ntBASIC3.19□□□□□ -1.9
PROM1O43490 Y_RNA.556-201ENST00000384677 113 ntBASIC3.19□□□□□ -1.9
PROM1O43490 AL356968.1-201ENST00000416622 474 ntBASIC3.19□□□□□ -1.9
PROM1O43490 RPL23AP82-202ENST00000427528 469 ntBASIC3.19□□□□□ -1.9
PROM1O43490 USP9YP16-201ENST00000430287 407 ntBASIC3.19□□□□□ -1.9
PROM1O43490 MTCO3P29-201ENST00000432119 779 ntBASIC3.19□□□□□ -1.9
PROM1O43490 AC108059.2-201ENST00000434626 151 ntBASIC3.19□□□□□ -1.9
PROM1O43490 PCNPP5-201ENST00000452246 481 ntBASIC3.19□□□□□ -1.9
PROM1O43490 MTATP6P7-201ENST00000453315 681 ntBASIC3.19□□□□□ -1.9
PROM1O43490 USP9YP23-201ENST00000455085 407 ntBASIC3.19□□□□□ -1.9
PROM1O43490 RPL21P10-201ENST00000463521 490 ntBASIC3.19□□□□□ -1.9
PROM1O43490 CENPBD1P1-201ENST00000464061 469 ntBASIC3.19□□□□□ -1.9
PROM1O43490 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.19□□□□□ -1.9
PROM1O43490 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.19□□□□□ -1.9
PROM1O43490 MYL12BP1-201ENST00000569826 507 ntBASIC3.19□□□□□ -1.9
PROM1O43490 MIR5701-3-201ENST00000578890 82 ntBASIC3.19□□□□□ -1.9
PROM1O43490 MIR5701-1-201ENST00000585138 82 ntBASIC3.19□□□□□ -1.9
PROM1O43490 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.19□□□□□ -1.9
PROM1O43490 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.19□□□□□ -1.9
PROM1O43490 MTND4LP5-201ENST00000605152 292 ntBASIC3.19□□□□□ -1.9
PROM1O43490 MIR5701-2-201ENST00000615634 82 ntBASIC3.19□□□□□ -1.9
PROM1O43490 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
PROM1O43490 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PROM1O43490 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PROM1O43490 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms