Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AL359198.2-201ENST00000611836 194 ntBASIC3.1□□□□□ -1.91
PHGDHO43175 AC233981.2-201ENST00000611524 1614 ntBASIC3.1□□□□□ -1.91
PHGDHO43175 AL049781.1-201ENST00000623195 3585 ntBASIC3.09□□□□□ -1.91
PHGDHO43175 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
PHGDHO43175 AC092268.1-201ENST00000342691 405 ntBASIC3.09□□□□□ -1.91
PHGDHO43175 Y_RNA.31-201ENST00000362574 102 ntBASIC3.09□□□□□ -1.91
PHGDHO43175 RNU6-1285P-201ENST00000363480 105 ntBASIC3.09□□□□□ -1.91
PHGDHO43175 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.09□□□□□ -1.91
PHGDHO43175 RNU6-1286P-201ENST00000383871 107 ntBASIC3.09□□□□□ -1.91
PHGDHO43175 RNU1-57P-201ENST00000384491 166 ntBASIC3.09□□□□□ -1.91
PHGDHO43175 MIR1302-11-201ENST00000408051 138 ntBASIC3.09□□□□□ -1.91
PHGDHO43175 MIR1302-9-201ENST00000408365 138 ntBASIC3.09□□□□□ -1.91
PHGDHO43175 MIR1302-10-201ENST00000408734 138 ntBASIC3.09□□□□□ -1.91
PHGDHO43175 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.09□□□□□ -1.91
PHGDHO43175 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.09□□□□□ -1.91
PHGDHO43175 AC243428.1-201ENST00000421099 264 ntBASIC3.09□□□□□ -1.91
PHGDHO43175 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.09□□□□□ -1.91
PHGDHO43175 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.09□□□□□ -1.91
PHGDHO43175 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.09□□□□□ -1.91
PHGDHO43175 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.09□□□□□ -1.91
PHGDHO43175 Y_RNA.639-201ENST00000458981 102 ntBASIC3.09□□□□□ -1.91
PHGDHO43175 RN7SL601P-201ENST00000471221 293 ntBASIC3.09□□□□□ -1.91
PHGDHO43175 AC068781.1-201ENST00000488231 618 ntBASIC3.09□□□□□ -1.91
PHGDHO43175 RNA5SP112-201ENST00000515937 99 ntBASIC3.09□□□□□ -1.91
PHGDHO43175 RNU6-470P-201ENST00000515954 104 ntBASIC3.09□□□□□ -1.91
PHGDHO43175 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.09□□□□□ -1.91
PHGDHO43175 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PHGDHO43175 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PHGDHO43175 AC060766.3-201ENST00000591442 263 ntBASIC3.09□□□□□ -1.91
PHGDHO43175 AC010620.2-201ENST00000600135 313 ntBASIC3.09□□□□□ -1.91
PHGDHO43175 MIR1302-2-201ENST00000607096 138 ntBASIC3.09□□□□□ -1.91
PHGDHO43175 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.09□□□□□ -1.91
PHGDHO43175 AL159153.1-201ENST00000619688 317 ntBASIC3.09□□□□□ -1.91
PHGDHO43175 SNORA43.4-201ENST00000629559 138 ntBASIC3.09□□□□□ -1.91
PHGDHO43175 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.09□□□□□ -1.92
PHGDHO43175 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PHGDHO43175 OR56A5-201ENST00000340110 738 ntBASIC3.08□□□□□ -1.92
PHGDHO43175 RNY1P16-201ENST00000363063 111 ntBASIC3.08□□□□□ -1.92
PHGDHO43175 Y_RNA.197-201ENST00000364004 102 ntBASIC3.08□□□□□ -1.92
PHGDHO43175 RNA5SP72-201ENST00000364442 117 ntBASIC3.08□□□□□ -1.92
PHGDHO43175 MIR186-201ENST00000384988 86 ntBASIC3.08□□□□□ -1.92
PHGDHO43175 RNU6-308P-201ENST00000390957 107 ntBASIC3.08□□□□□ -1.92
PHGDHO43175 RN7SKP123-201ENST00000410732 291 ntBASIC3.08□□□□□ -1.92
PHGDHO43175 BMS1P22-201ENST00000414726 313 ntBASIC3.08□□□□□ -1.92
PHGDHO43175 CYCSP48-201ENST00000417124 323 ntBASIC3.08□□□□□ -1.92
PHGDHO43175 YME1L1P1-201ENST00000429435 297 ntBASIC3.08□□□□□ -1.92
PHGDHO43175 RPL23AP58-201ENST00000440453 469 ntBASIC3.08□□□□□ -1.92
PHGDHO43175 Z75741.1-201ENST00000446793 314 ntBASIC3.08□□□□□ -1.92
PHGDHO43175 AL353705.4-201ENST00000449661 238 ntBASIC3.08□□□□□ -1.92
PHGDHO43175 AC006483.1-201ENST00000487308 313 ntBASIC3.08□□□□□ -1.92
PHGDHO43175 RPL17P19-201ENST00000489069 552 ntBASIC3.08□□□□□ -1.92
PHGDHO43175 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.08□□□□□ -1.92
PHGDHO43175 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.08□□□□□ -1.92
PHGDHO43175 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.08□□□□□ -1.92
PHGDHO43175 AP003072.1-201ENST00000531740 145 ntBASIC3.08□□□□□ -1.92
PHGDHO43175 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.08□□□□□ -1.92
PHGDHO43175 AC103810.1-201ENST00000579873 453 ntBASIC3.08□□□□□ -1.92
PHGDHO43175 7SK.7-201ENST00000603504 247 ntBASIC3.08□□□□□ -1.92
PHGDHO43175 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.08□□□□□ -1.92
PHGDHO43175 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PHGDHO43175 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PHGDHO43175 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PHGDHO43175 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PHGDHO43175 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PHGDHO43175 AL353743.1-202ENST00000431724 1695 ntBASIC3.08□□□□□ -1.92
PHGDHO43175 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PHGDHO43175 AP000560.1-201ENST00000624150 1937 ntBASIC3.07□□□□□ -1.92
PHGDHO43175 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
PHGDHO43175 Y_RNA.40-201ENST00000362645 93 ntBASIC3.07□□□□□ -1.92
PHGDHO43175 RNU6-486P-201ENST00000363116 107 ntBASIC3.07□□□□□ -1.92
PHGDHO43175 RNU6-595P-201ENST00000363944 107 ntBASIC3.07□□□□□ -1.92
PHGDHO43175 SNORA68.1-201ENST00000364537 132 ntBASIC3.07□□□□□ -1.92
PHGDHO43175 AL590135.1-201ENST00000422215 156 ntBASIC3.07□□□□□ -1.92
PHGDHO43175 AC019205.3-201ENST00000424573 156 ntBASIC3.07□□□□□ -1.92
PHGDHO43175 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.07□□□□□ -1.92
PHGDHO43175 AC016700.2-201ENST00000446011 156 ntBASIC3.07□□□□□ -1.92
PHGDHO43175 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.07□□□□□ -1.92
PHGDHO43175 PRSS3P4-201ENST00000453323 162 ntBASIC3.07□□□□□ -1.92
PHGDHO43175 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.07□□□□□ -1.92
PHGDHO43175 RN7SL20P-201ENST00000488827 297 ntBASIC3.07□□□□□ -1.92
PHGDHO43175 AC096576.1-201ENST00000489014 359 ntBASIC3.07□□□□□ -1.92
PHGDHO43175 AC015911.1-201ENST00000495111 156 ntBASIC3.07□□□□□ -1.92
PHGDHO43175 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.07□□□□□ -1.92
PHGDHO43175 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.07□□□□□ -1.92
PHGDHO43175 SCARNA15.1-201ENST00000516384 125 ntBASIC3.07□□□□□ -1.92
PHGDHO43175 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.07□□□□□ -1.92
PHGDHO43175 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.07□□□□□ -1.92
PHGDHO43175 AC016256.1-201ENST00000547971 354 ntBASIC3.07□□□□□ -1.92
PHGDHO43175 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.07□□□□□ -1.92
PHGDHO43175 MIR3171-201ENST00000584270 74 ntBASIC3.07□□□□□ -1.92
PHGDHO43175 AC012314.7-201ENST00000619693 93 ntBASIC3.07□□□□□ -1.92
PHGDHO43175 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
PHGDHO43175 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.06□□□□□ -1.92
PHGDHO43175 SNORA71.3-201ENST00000362582 128 ntBASIC3.06□□□□□ -1.92
PHGDHO43175 RNU6-490P-201ENST00000362985 107 ntBASIC3.06□□□□□ -1.92
PHGDHO43175 Y_RNA.326-201ENST00000365176 113 ntBASIC3.06□□□□□ -1.92
PHGDHO43175 Y_RNA.445-201ENST00000384168 102 ntBASIC3.06□□□□□ -1.92
PHGDHO43175 SNORA29-201ENST00000384183 140 ntBASIC3.06□□□□□ -1.92
PHGDHO43175 MIR559-201ENST00000385188 96 ntBASIC3.06□□□□□ -1.92
PHGDHO43175 SNORD67-201ENST00000390833 111 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms