Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 AC090578.1-201ENST00000604955 591 ntBASIC1.52□□□□□ -2.17
CLOCKO15516 AL050303.3-201ENST00000613704 284 ntBASIC1.52□□□□□ -2.17
CLOCKO15516 AC097372.5-201ENST00000623665 376 ntBASIC1.52□□□□□ -2.17
CLOCKO15516 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CLOCKO15516 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CLOCKO15516 U6.114-201ENST00000636407 96 ntBASIC1.52□□□□□ -2.17
CLOCKO15516 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.52□□□□□ -2.17
CLOCKO15516 ZNF680P1-201ENST00000436625 1469 ntBASIC1.51□□□□□ -2.17
CLOCKO15516 MTND4P23-201ENST00000447723 1363 ntBASIC1.51□□□□□ -2.17
CLOCKO15516 RNU6-23P-201ENST00000363283 107 ntBASIC1.51□□□□□ -2.17
CLOCKO15516 RNU6-105P-201ENST00000363909 104 ntBASIC1.51□□□□□ -2.17
CLOCKO15516 RNU6-1245P-201ENST00000411130 106 ntBASIC1.51□□□□□ -2.17
CLOCKO15516 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.51□□□□□ -2.17
CLOCKO15516 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.51□□□□□ -2.17
CLOCKO15516 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.51□□□□□ -2.17
CLOCKO15516 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.51□□□□□ -2.17
CLOCKO15516 AC022447.4-201ENST00000504053 364 ntBASIC1.51□□□□□ -2.17
CLOCKO15516 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.51□□□□□ -2.17
CLOCKO15516 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.51□□□□□ -2.17
CLOCKO15516 AC108729.3-201ENST00000513484 108 ntBASIC1.51□□□□□ -2.17
CLOCKO15516 RN7SKP265-201ENST00000516448 223 ntBASIC1.51□□□□□ -2.17
CLOCKO15516 RNU6-250P-201ENST00000516958 103 ntBASIC1.51□□□□□ -2.17
CLOCKO15516 MIR3682-201ENST00000581338 84 ntBASIC1.51□□□□□ -2.17
CLOCKO15516 AC098848.2-201ENST00000588023 330 ntBASIC1.51□□□□□ -2.17
CLOCKO15516 AC023043.2-201ENST00000589678 1026 ntBASIC1.51□□□□□ -2.17
CLOCKO15516 AC092354.1-201ENST00000606057 376 ntBASIC1.51□□□□□ -2.17
CLOCKO15516 uc_338.5-201ENST00000611839 155 ntBASIC1.51□□□□□ -2.17
CLOCKO15516 AC130454.1-201ENST00000622948 401 ntBASIC1.51□□□□□ -2.17
CLOCKO15516 AC011155.2-201ENST00000623202 216 ntBASIC1.51□□□□□ -2.17
CLOCKO15516 RNA5SP493-201ENST00000364115 91 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 Y_RNA.324-201ENST00000365165 102 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CLOCKO15516 RNU6-550P-201ENST00000391057 101 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 AC068050.1-201ENST00000394891 380 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 AL357139.1-201ENST00000407792 426 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 RNA5SP100-201ENST00000410903 110 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 RNA5SP59-201ENST00000410922 110 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 RN7SKP101-201ENST00000411376 320 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 RPS3AP3-201ENST00000411933 242 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.5□□□□□ -2.17
CLOCKO15516 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.5□□□□□ -2.17
CLOCKO15516 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 AC079781.2-201ENST00000446424 169 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 FO393415.2-201ENST00000480085 343 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 AC132942.1-201ENST00000486753 483 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 RNVU1-2-201ENST00000516326 135 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 RNU6-410P-201ENST00000517006 107 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.5□□□□□ -2.17
CLOCKO15516 COPS8P3-201ENST00000526024 482 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 AP001893.2-201ENST00000526949 202 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.5□□□□□ -2.17
CLOCKO15516 TRAV32-201ENST00000553993 340 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 MIR3169-201ENST00000578032 83 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 MIR548AB-201ENST00000584917 84 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 AC024933.1-201ENST00000608472 348 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
CLOCKO15516 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.5□□□□□ -2.17
CLOCKO15516 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CLOCKO15516 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CLOCKO15516 AC233981.2-201ENST00000611524 1614 ntBASIC1.5□□□□□ -2.17
CLOCKO15516 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CLOCKO15516 RNU4-15P-201ENST00000362613 141 ntBASIC1.49□□□□□ -2.17
CLOCKO15516 RNU6-1287P-201ENST00000362914 107 ntBASIC1.49□□□□□ -2.17
CLOCKO15516 RNU6-457P-201ENST00000363999 107 ntBASIC1.49□□□□□ -2.17
CLOCKO15516 SNORD32B-201ENST00000364460 84 ntBASIC1.49□□□□□ -2.17
CLOCKO15516 RNY4P34-201ENST00000364779 95 ntBASIC1.49□□□□□ -2.17
CLOCKO15516 Y_RNA.367-201ENST00000365544 101 ntBASIC1.49□□□□□ -2.17
CLOCKO15516 RNU6-1060P-201ENST00000384664 107 ntBASIC1.49□□□□□ -2.17
CLOCKO15516 MIR30A-201ENST00000385092 71 ntBASIC1.49□□□□□ -2.17
CLOCKO15516 FGF7P8-201ENST00000402994 292 ntBASIC1.49□□□□□ -2.17
CLOCKO15516 Y_RNA.595-201ENST00000410403 105 ntBASIC1.49□□□□□ -2.17
CLOCKO15516 RPL23AP36-201ENST00000413895 458 ntBASIC1.49□□□□□ -2.17
CLOCKO15516 HIGD1AP15-201ENST00000416198 280 ntBASIC1.49□□□□□ -2.17
CLOCKO15516 AC010099.3-201ENST00000423896 409 ntBASIC1.49□□□□□ -2.17
CLOCKO15516 MTND1P30-201ENST00000441241 901 ntBASIC1.49□□□□□ -2.17
CLOCKO15516 AC243964.1-201ENST00000441814 261 ntBASIC1.49□□□□□ -2.17
CLOCKO15516 AL357134.1-201ENST00000445848 426 ntBASIC1.49□□□□□ -2.17
CLOCKO15516 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.49□□□□□ -2.17
CLOCKO15516 AC023790.1-201ENST00000482174 347 ntBASIC1.49□□□□□ -2.17
CLOCKO15516 MTND3P5-201ENST00000512798 333 ntBASIC1.49□□□□□ -2.17
CLOCKO15516 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.49□□□□□ -2.17
CLOCKO15516 RNU6-377P-201ENST00000515965 102 ntBASIC1.49□□□□□ -2.17
CLOCKO15516 AC106038.2-201ENST00000520706 568 ntBASIC1.49□□□□□ -2.17
CLOCKO15516 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.49□□□□□ -2.17
CLOCKO15516 AP003072.2-201ENST00000527756 676 ntBASIC1.49□□□□□ -2.17
CLOCKO15516 AC009094.1-201ENST00000564443 426 ntBASIC1.49□□□□□ -2.17
CLOCKO15516 MIR3683-201ENST00000580847 82 ntBASIC1.49□□□□□ -2.17
CLOCKO15516 AC016727.1-205ENST00000605437 569 ntBASIC1.49□□□□□ -2.17
CLOCKO15516 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.49□□□□□ -2.17
CLOCKO15516 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CLOCKO15516 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.49□□□□□ -2.17
CLOCKO15516 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.49□□□□□ -2.17
CLOCKO15516 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.49□□□□□ -2.17
CLOCKO15516 AC008993.2-201ENST00000631744 806 ntBASIC1.49□□□□□ -2.17
CLOCKO15516 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.48□□□□□ -2.17
CLOCKO15516 MIR378A-201ENST00000362177 66 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms