Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 PTGES3P4-201ENST00000426243 356 ntBASIC2.12□□□□□ -2.07
CDX4O14627 ERLEC1P1-201ENST00000433806 578 ntBASIC2.12□□□□□ -2.07
CDX4O14627 AL445687.1-201ENST00000439946 251 ntBASIC2.12□□□□□ -2.07
CDX4O14627 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.12□□□□□ -2.07
CDX4O14627 AC233279.1-201ENST00000455300 423 ntBASIC2.12□□□□□ -2.07
CDX4O14627 AC006026.2-201ENST00000457376 180 ntBASIC2.12□□□□□ -2.07
CDX4O14627 SCARNA18-201ENST00000459004 134 ntBASIC2.12□□□□□ -2.07
CDX4O14627 GZMAP1-201ENST00000503054 631 ntBASIC2.12□□□□□ -2.07
CDX4O14627 AC079140.5-201ENST00000507882 310 ntBASIC2.12□□□□□ -2.07
CDX4O14627 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.12□□□□□ -2.07
CDX4O14627 AC104136.1-201ENST00000512969 394 ntBASIC2.12□□□□□ -2.07
CDX4O14627 AC112206.3-201ENST00000514578 389 ntBASIC2.12□□□□□ -2.07
CDX4O14627 LRRC34P2-201ENST00000514850 553 ntBASIC2.12□□□□□ -2.07
CDX4O14627 BTF3P12-201ENST00000519620 469 ntBASIC2.12□□□□□ -2.07
CDX4O14627 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.12□□□□□ -2.07
CDX4O14627 AC107953.1-201ENST00000522216 297 ntBASIC2.12□□□□□ -2.07
CDX4O14627 AL137161.1-201ENST00000532231 390 ntBASIC2.12□□□□□ -2.07
CDX4O14627 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.12□□□□□ -2.07
CDX4O14627 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.12□□□□□ -2.07
CDX4O14627 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.12□□□□□ -2.07
CDX4O14627 UBE2V2P2-201ENST00000587677 504 ntBASIC2.12□□□□□ -2.07
CDX4O14627 AC063943.3-201ENST00000615562 356 ntBASIC2.12□□□□□ -2.07
CDX4O14627 AL136221.1-201ENST00000621449 509 ntBASIC2.12□□□□□ -2.07
CDX4O14627 AC135776.4-201ENST00000624300 1904 ntBASIC2.12□□□□□ -2.07
CDX4O14627 CDC27P3-201ENST00000635418 1910 ntBASIC2.12□□□□□ -2.07
CDX4O14627 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CDX4O14627 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CDX4O14627 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CDX4O14627 RNU6-1127P-201ENST00000384580 107 ntBASIC2.11□□□□□ -2.07
CDX4O14627 RNU6-748P-201ENST00000384648 107 ntBASIC2.11□□□□□ -2.07
CDX4O14627 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CDX4O14627 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.11□□□□□ -2.07
CDX4O14627 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.11□□□□□ -2.07
CDX4O14627 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.11□□□□□ -2.07
CDX4O14627 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.11□□□□□ -2.07
CDX4O14627 AC107626.1-201ENST00000471084 183 ntBASIC2.11□□□□□ -2.07
CDX4O14627 AC083904.1-201ENST00000487828 231 ntBASIC2.11□□□□□ -2.07
CDX4O14627 AC090096.1-201ENST00000489168 390 ntBASIC2.11□□□□□ -2.07
CDX4O14627 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.11□□□□□ -2.07
CDX4O14627 AC022493.1-201ENST00000492984 337 ntBASIC2.11□□□□□ -2.07
CDX4O14627 RNU5F-8P-201ENST00000515941 111 ntBASIC2.11□□□□□ -2.07
CDX4O14627 Y_RNA.665-201ENST00000516177 98 ntBASIC2.11□□□□□ -2.07
CDX4O14627 SNORA31.15-201ENST00000516771 132 ntBASIC2.11□□□□□ -2.07
CDX4O14627 BNIP3P6-201ENST00000549284 499 ntBASIC2.11□□□□□ -2.07
CDX4O14627 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.11□□□□□ -2.07
CDX4O14627 uc_338.14-201ENST00000613162 166 ntBASIC2.11□□□□□ -2.07
CDX4O14627 AC009831.4-201ENST00000620744 325 ntBASIC2.11□□□□□ -2.07
CDX4O14627 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CDX4O14627 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.11□□□□□ -2.07
CDX4O14627 MTND5P30-201ENST00000452896 1731 ntBASIC2.11□□□□□ -2.07
CDX4O14627 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CDX4O14627 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.1□□□□□ -2.07
CDX4O14627 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDX4O14627 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDX4O14627 RNU6-845P-201ENST00000362578 103 ntBASIC2.1□□□□□ -2.07
CDX4O14627 Y_RNA.72-201ENST00000362894 103 ntBASIC2.1□□□□□ -2.07
CDX4O14627 RNU6-522P-201ENST00000364497 107 ntBASIC2.1□□□□□ -2.07
CDX4O14627 RNU6-767P-201ENST00000384132 107 ntBASIC2.1□□□□□ -2.07
CDX4O14627 SNORD70.1-201ENST00000391007 85 ntBASIC2.1□□□□□ -2.07
CDX4O14627 RAP1BP3-201ENST00000407180 549 ntBASIC2.1□□□□□ -2.07
CDX4O14627 EEF1A1P40-201ENST00000412883 573 ntBASIC2.1□□□□□ -2.07
CDX4O14627 RPL21P90-201ENST00000415692 466 ntBASIC2.1□□□□□ -2.07
CDX4O14627 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.1□□□□□ -2.07
CDX4O14627 AC108667.1-201ENST00000428618 249 ntBASIC2.1□□□□□ -2.07
CDX4O14627 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.1□□□□□ -2.07
CDX4O14627 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.1□□□□□ -2.07
CDX4O14627 AC092001.1-201ENST00000453012 261 ntBASIC2.1□□□□□ -2.07
CDX4O14627 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.1□□□□□ -2.07
CDX4O14627 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.1□□□□□ -2.07
CDX4O14627 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.1□□□□□ -2.07
CDX4O14627 AC116655.1-201ENST00000508324 901 ntBASIC2.1□□□□□ -2.07
CDX4O14627 SNORA31.18-201ENST00000517043 134 ntBASIC2.1□□□□□ -2.07
CDX4O14627 RNU6-1314P-201ENST00000517139 104 ntBASIC2.1□□□□□ -2.07
CDX4O14627 MIR4446-201ENST00000578505 67 ntBASIC2.1□□□□□ -2.07
CDX4O14627 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.1□□□□□ -2.07
CDX4O14627 AC091152.3-201ENST00000604227 325 ntBASIC2.1□□□□□ -2.07
CDX4O14627 CTHRC1P1-201ENST00000605383 469 ntBASIC2.1□□□□□ -2.07
CDX4O14627 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.1□□□□□ -2.07
CDX4O14627 AC092807.2-201ENST00000609367 243 ntBASIC2.1□□□□□ -2.07
CDX4O14627 AC009248.2-201ENST00000619826 254 ntBASIC2.1□□□□□ -2.07
CDX4O14627 AC104985.2-201ENST00000620598 500 ntBASIC2.1□□□□□ -2.07
CDX4O14627 MIR6132-201ENST00000622083 109 ntBASIC2.1□□□□□ -2.07
CDX4O14627 SCARNA4-202ENST00000625402 129 ntBASIC2.1□□□□□ -2.07
CDX4O14627 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.1□□□□□ -2.07
CDX4O14627 AC010329.5-201ENST00000623497 2174 ntBASIC2.1□□□□□ -2.07
CDX4O14627 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.1□□□□□ -2.07
CDX4O14627 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.09□□□□□ -2.07
CDX4O14627 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
CDX4O14627 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
CDX4O14627 Y_RNA.167-201ENST00000363735 109 ntBASIC2.09□□□□□ -2.07
CDX4O14627 RNU6-715P-201ENST00000365204 103 ntBASIC2.09□□□□□ -2.07
CDX4O14627 RNU6-898P-201ENST00000365627 104 ntBASIC2.09□□□□□ -2.07
CDX4O14627 Z98749.2-208ENST00000381646 500 ntBASIC2.09□□□□□ -2.07
CDX4O14627 MIR578-201ENST00000384828 96 ntBASIC2.09□□□□□ -2.07
CDX4O14627 MIR10A-201ENST00000385043 110 ntBASIC2.09□□□□□ -2.07
CDX4O14627 SNORA16.2-201ENST00000390991 127 ntBASIC2.09□□□□□ -2.07
CDX4O14627 RNU6-1009P-201ENST00000390996 107 ntBASIC2.09□□□□□ -2.07
CDX4O14627 U3.37-201ENST00000408528 213 ntBASIC2.09□□□□□ -2.07
CDX4O14627 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.09□□□□□ -2.07
CDX4O14627 PDCL2P1-201ENST00000419302 352 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms