Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.24□□□□□ -2.21
UPK1AO00322 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
UPK1AO00322 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.23□□□□□ -2.21
UPK1AO00322 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
UPK1AO00322 RNA5SP99-201ENST00000364020 114 ntBASIC1.23□□□□□ -2.21
UPK1AO00322 SNORA62.1-201ENST00000364287 154 ntBASIC1.23□□□□□ -2.21
UPK1AO00322 Y_RNA.576-201ENST00000384781 102 ntBASIC1.23□□□□□ -2.21
UPK1AO00322 Y_RNA.598-201ENST00000410480 95 ntBASIC1.23□□□□□ -2.21
UPK1AO00322 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.23□□□□□ -2.21
UPK1AO00322 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.23□□□□□ -2.21
UPK1AO00322 MTND5P25-201ENST00000430499 799 ntBASIC1.23□□□□□ -2.21
UPK1AO00322 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.23□□□□□ -2.21
UPK1AO00322 AC112492.4-201ENST00000456549 352 ntBASIC1.23□□□□□ -2.21
UPK1AO00322 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.23□□□□□ -2.21
UPK1AO00322 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.23□□□□□ -2.21
UPK1AO00322 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.23□□□□□ -2.21
UPK1AO00322 RNU5F-2P-201ENST00000516066 82 ntBASIC1.23□□□□□ -2.21
UPK1AO00322 RNA5SP490-201ENST00000517141 136 ntBASIC1.23□□□□□ -2.21
UPK1AO00322 DNAJC19P9-201ENST00000555084 351 ntBASIC1.23□□□□□ -2.21
UPK1AO00322 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.23□□□□□ -2.21
UPK1AO00322 AC073539.2-201ENST00000597113 165 ntBASIC1.23□□□□□ -2.21
UPK1AO00322 AC016925.2-201ENST00000605108 242 ntBASIC1.23□□□□□ -2.21
UPK1AO00322 AL451064.1-201ENST00000607718 471 ntBASIC1.23□□□□□ -2.21
UPK1AO00322 AL512598.1-201ENST00000610158 273 ntBASIC1.23□□□□□ -2.21
UPK1AO00322 MIR6715A-201ENST00000615929 79 ntBASIC1.23□□□□□ -2.21
UPK1AO00322 AC138649.3-201ENST00000622154 254 ntBASIC1.23□□□□□ -2.21
UPK1AO00322 AC008993.2-201ENST00000631744 806 ntBASIC1.23□□□□□ -2.21
UPK1AO00322 AC099654.13-201ENST00000639774 207 ntBASIC1.23□□□□□ -2.21
UPK1AO00322 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
UPK1AO00322 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
UPK1AO00322 MIR424-201ENST00000362227 98 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 RNU6-1287P-201ENST00000362914 107 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 RNA5SP493-201ENST00000364115 91 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 RNU6-1060P-201ENST00000384664 107 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 MIR150-201ENST00000385048 84 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.22□□□□□ -2.21
UPK1AO00322 OR6C66P-201ENST00000414917 930 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.22□□□□□ -2.21
UPK1AO00322 AL593851.1-201ENST00000426171 157 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 AC108667.1-201ENST00000428618 249 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 MTATP6P16-201ENST00000434543 526 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 AL121601.2-201ENST00000438019 707 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.22□□□□□ -2.21
UPK1AO00322 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.22□□□□□ -2.21
UPK1AO00322 RNU6-333P-201ENST00000459117 107 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 RN7SKP210-201ENST00000459176 261 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 SNRPGP7-201ENST00000469016 106 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 AC132942.1-201ENST00000486753 483 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 RNVU1-2-201ENST00000516326 135 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 SCARNA24.1-201ENST00000516465 137 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 Vault.3-201ENST00000516676 95 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 RN7SKP219-201ENST00000516825 296 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 RNU6-1220P-201ENST00000517126 108 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.22□□□□□ -2.21
UPK1AO00322 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.22□□□□□ -2.21
UPK1AO00322 AC090821.2-201ENST00000523552 176 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 AL356057.1-201ENST00000533798 831 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
UPK1AO00322 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.22□□□□□ -2.21
UPK1AO00322 TRAV32-201ENST00000553993 340 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.22□□□□□ -2.21
UPK1AO00322 MIR4421-201ENST00000578133 69 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 AC010900.2-201ENST00000604508 210 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 AC123912.5-201ENST00000605470 343 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 AC131159.1-201ENST00000621854 213 ntBASIC1.22□□□□□ -2.21
UPK1AO00322 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.22□□□□□ -2.21
UPK1AO00322 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.21□□□□□ -2.22
UPK1AO00322 ZNF680P1-201ENST00000436625 1469 ntBASIC1.21□□□□□ -2.22
UPK1AO00322 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
UPK1AO00322 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
UPK1AO00322 RNA5SP100-201ENST00000410903 110 ntBASIC1.21□□□□□ -2.22
UPK1AO00322 RNA5SP59-201ENST00000410922 110 ntBASIC1.21□□□□□ -2.22
UPK1AO00322 RNU6-607P-201ENST00000411283 108 ntBASIC1.21□□□□□ -2.22
UPK1AO00322 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.21□□□□□ -2.22
UPK1AO00322 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.21□□□□□ -2.22
UPK1AO00322 AC104850.1-201ENST00000435940 476 ntBASIC1.21□□□□□ -2.22
UPK1AO00322 KATNBL1P3-201ENST00000443475 909 ntBASIC1.21□□□□□ -2.22
UPK1AO00322 EPS15P1-201ENST00000448836 336 ntBASIC1.21□□□□□ -2.22
UPK1AO00322 RNU7-95P-201ENST00000459222 64 ntBASIC1.21□□□□□ -2.22
UPK1AO00322 AC004223.1-201ENST00000479840 271 ntBASIC1.21□□□□□ -2.22
UPK1AO00322 MTND3P5-201ENST00000512798 333 ntBASIC1.21□□□□□ -2.22
UPK1AO00322 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.21□□□□□ -2.22
UPK1AO00322 RNU6-377P-201ENST00000515965 102 ntBASIC1.21□□□□□ -2.22
UPK1AO00322 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.21□□□□□ -2.22
UPK1AO00322 MTND2P32-201ENST00000521584 1038 ntBASIC1.21□□□□□ -2.22
UPK1AO00322 AC087883.1-201ENST00000551882 391 ntBASIC1.21□□□□□ -2.22
UPK1AO00322 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.21□□□□□ -2.22
UPK1AO00322 MIR4524B-201ENST00000581569 115 ntBASIC1.21□□□□□ -2.22
UPK1AO00322 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.21□□□□□ -2.22
UPK1AO00322 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.21□□□□□ -2.22
UPK1AO00322 AC245884.10-201ENST00000597355 337 ntBASIC1.21□□□□□ -2.22
UPK1AO00322 AL034555.1-201ENST00000604816 211 ntBASIC1.21□□□□□ -2.22
UPK1AO00322 AC018889.1-201ENST00000605372 397 ntBASIC1.21□□□□□ -2.22
UPK1AO00322 AL050343.2-201ENST00000607338 280 ntBASIC1.21□□□□□ -2.22
UPK1AO00322 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.21□□□□□ -2.22
UPK1AO00322 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.21□□□□□ -2.22
UPK1AO00322 AL590240.4-201ENST00000616908 390 ntBASIC1.21□□□□□ -2.22
UPK1AO00322 AC009159.2-201ENST00000617603 606 ntBASIC1.21□□□□□ -2.22
UPK1AO00322 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms