Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 SUMO2P5-201ENST00000506790 245 ntBASIC0.83□□□□□ -2.28
RTL1A6NKG5 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.83□□□□□ -2.28
RTL1A6NKG5 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.83□□□□□ -2.28
RTL1A6NKG5 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.83□□□□□ -2.28
RTL1A6NKG5 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.83□□□□□ -2.28
RTL1A6NKG5 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.83□□□□□ -2.28
RTL1A6NKG5 AC004492.1-201ENST00000607036 742 ntBASIC0.83□□□□□ -2.28
RTL1A6NKG5 AC022893.3-201ENST00000607665 437 ntBASIC0.83□□□□□ -2.28
RTL1A6NKG5 AL355816.2-201ENST00000610049 647 ntBASIC0.83□□□□□ -2.28
RTL1A6NKG5 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.82□□□□□ -2.28
RTL1A6NKG5 AL589826.1-201ENST00000340697 249 ntBASIC0.82□□□□□ -2.28
RTL1A6NKG5 Y_RNA.33-201ENST00000362591 102 ntBASIC0.82□□□□□ -2.28
RTL1A6NKG5 SNORD33-201ENST00000362761 85 ntBASIC0.82□□□□□ -2.28
RTL1A6NKG5 SNORD116-20-201ENST00000384529 92 ntBASIC0.82□□□□□ -2.28
RTL1A6NKG5 MRPL35P1-201ENST00000404272 572 ntBASIC0.82□□□□□ -2.28
RTL1A6NKG5 MIR1284-201ENST00000408337 120 ntBASIC0.82□□□□□ -2.28
RTL1A6NKG5 RNA5SP390-201ENST00000410191 113 ntBASIC0.82□□□□□ -2.28
RTL1A6NKG5 RNA5SP193-201ENST00000410353 107 ntBASIC0.82□□□□□ -2.28
RTL1A6NKG5 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.82□□□□□ -2.28
RTL1A6NKG5 MTND5P15-201ENST00000434246 349 ntBASIC0.82□□□□□ -2.28
RTL1A6NKG5 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.82□□□□□ -2.28
RTL1A6NKG5 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.82□□□□□ -2.28
RTL1A6NKG5 MTCO1P27-201ENST00000448269 226 ntBASIC0.82□□□□□ -2.28
RTL1A6NKG5 OR2AQ1P-201ENST00000451972 200 ntBASIC0.82□□□□□ -2.28
RTL1A6NKG5 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.82□□□□□ -2.28
RTL1A6NKG5 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.82□□□□□ -2.28
RTL1A6NKG5 RNU6-914P-201ENST00000516749 109 ntBASIC0.82□□□□□ -2.28
RTL1A6NKG5 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.82□□□□□ -2.28
RTL1A6NKG5 HMGB1P33-201ENST00000563485 527 ntBASIC0.82□□□□□ -2.28
RTL1A6NKG5 MIR8065-201ENST00000620577 100 ntBASIC0.82□□□□□ -2.28
RTL1A6NKG5 AC007792.1-201ENST00000623023 402 ntBASIC0.82□□□□□ -2.28
RTL1A6NKG5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.82□□□□□ -2.28
RTL1A6NKG5 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.82□□□□□ -2.28
RTL1A6NKG5 LINC02555-201ENST00000563933 1951 ntBASIC0.81□□□□□ -2.28
RTL1A6NKG5 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.81□□□□□ -2.28
RTL1A6NKG5 SNORA75B-201ENST00000384053 137 ntBASIC0.81□□□□□ -2.28
RTL1A6NKG5 RNU6-1222P-201ENST00000384615 107 ntBASIC0.81□□□□□ -2.28
RTL1A6NKG5 C8orf59P1-201ENST00000429930 303 ntBASIC0.81□□□□□ -2.28
RTL1A6NKG5 AC003071.1-201ENST00000451219 789 ntBASIC0.81□□□□□ -2.28
RTL1A6NKG5 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
RTL1A6NKG5 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.81□□□□□ -2.28
RTL1A6NKG5 RPL9P9-202ENST00000466501 579 ntBASIC0.81□□□□□ -2.28
RTL1A6NKG5 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.81□□□□□ -2.28
RTL1A6NKG5 AC097473.1-201ENST00000508142 408 ntBASIC0.81□□□□□ -2.28
RTL1A6NKG5 AC067942.3-201ENST00000512025 362 ntBASIC0.81□□□□□ -2.28
RTL1A6NKG5 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.81□□□□□ -2.28
RTL1A6NKG5 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.81□□□□□ -2.28
RTL1A6NKG5 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.81□□□□□ -2.28
RTL1A6NKG5 RMST_4.1-201ENST00000616886 107 ntBASIC0.81□□□□□ -2.28
RTL1A6NKG5 AC009033.1-201ENST00000624279 431 ntBASIC0.81□□□□□ -2.28
RTL1A6NKG5 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.81□□□□□ -2.28
RTL1A6NKG5 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
RTL1A6NKG5 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
RTL1A6NKG5 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.8□□□□□ -2.28
RTL1A6NKG5 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
RTL1A6NKG5 AL161935.2-201ENST00000414627 60 ntBASIC0.8□□□□□ -2.28
RTL1A6NKG5 MTND4P3-201ENST00000417829 541 ntBASIC0.8□□□□□ -2.28
RTL1A6NKG5 AC245047.4-201ENST00000433189 144 ntBASIC0.8□□□□□ -2.28
RTL1A6NKG5 AC092628.1-201ENST00000436250 252 ntBASIC0.8□□□□□ -2.28
RTL1A6NKG5 RNU6-333P-201ENST00000459117 107 ntBASIC0.8□□□□□ -2.28
RTL1A6NKG5 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.8□□□□□ -2.28
RTL1A6NKG5 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.8□□□□□ -2.28
RTL1A6NKG5 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.8□□□□□ -2.28
RTL1A6NKG5 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.8□□□□□ -2.28
RTL1A6NKG5 AP003465.2-201ENST00000602571 373 ntBASIC0.8□□□□□ -2.28
RTL1A6NKG5 AC022022.2-201ENST00000602989 360 ntBASIC0.8□□□□□ -2.28
RTL1A6NKG5 AC092574.1-201ENST00000609771 420 ntBASIC0.8□□□□□ -2.28
RTL1A6NKG5 AL365204.3-201ENST00000612448 685 ntBASIC0.8□□□□□ -2.28
RTL1A6NKG5 AC106800.4-201ENST00000614905 153 ntBASIC0.8□□□□□ -2.28
RTL1A6NKG5 AC068880.4-201ENST00000623082 495 ntBASIC0.8□□□□□ -2.28
RTL1A6NKG5 AC099654.5-201ENST00000636479 350 ntBASIC0.8□□□□□ -2.28
RTL1A6NKG5 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
RTL1A6NKG5 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
RTL1A6NKG5 Y_RNA.374-201ENST00000365606 101 ntBASIC0.79□□□□□ -2.28
RTL1A6NKG5 RNU6-224P-201ENST00000384055 107 ntBASIC0.79□□□□□ -2.28
RTL1A6NKG5 SNORA40.2-201ENST00000390847 128 ntBASIC0.79□□□□□ -2.28
RTL1A6NKG5 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.79□□□□□ -2.28
RTL1A6NKG5 Y_RNA.623-201ENST00000411128 95 ntBASIC0.79□□□□□ -2.28
RTL1A6NKG5 USP9YP33-201ENST00000412220 421 ntBASIC0.79□□□□□ -2.28
RTL1A6NKG5 EIF1P1-201ENST00000421436 341 ntBASIC0.79□□□□□ -2.28
RTL1A6NKG5 PGBD4P5-201ENST00000445958 426 ntBASIC0.79□□□□□ -2.28
RTL1A6NKG5 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.79□□□□□ -2.28
RTL1A6NKG5 AC132479.1-201ENST00000449160 144 ntBASIC0.79□□□□□ -2.28
RTL1A6NKG5 RPS27AP8-201ENST00000452665 445 ntBASIC0.79□□□□□ -2.28
RTL1A6NKG5 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.79□□□□□ -2.28
RTL1A6NKG5 UBL5P1-201ENST00000507979 193 ntBASIC0.79□□□□□ -2.28
RTL1A6NKG5 RNU6-1028P-201ENST00000517164 93 ntBASIC0.79□□□□□ -2.28
RTL1A6NKG5 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.79□□□□□ -2.28
RTL1A6NKG5 NIFKP6-201ENST00000598115 845 ntBASIC0.79□□□□□ -2.28
RTL1A6NKG5 AC090578.1-201ENST00000604955 591 ntBASIC0.79□□□□□ -2.28
RTL1A6NKG5 AP000654.2-201ENST00000605633 586 ntBASIC0.79□□□□□ -2.28
RTL1A6NKG5 MIR15A-201ENST00000607334 83 ntBASIC0.79□□□□□ -2.28
RTL1A6NKG5 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
RTL1A6NKG5 AL354696.1-201ENST00000614652 497 ntBASIC0.79□□□□□ -2.28
RTL1A6NKG5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.79□□□□□ -2.28
RTL1A6NKG5 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
RTL1A6NKG5 MIR330-201ENST00000362196 94 ntBASIC0.78□□□□□ -2.28
RTL1A6NKG5 SMIM11P1-201ENST00000369586 178 ntBASIC0.78□□□□□ -2.28
RTL1A6NKG5 RNU6-72P-201ENST00000384285 79 ntBASIC0.78□□□□□ -2.28
RTL1A6NKG5 MIR548B-201ENST00000385247 97 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms