Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC66A2RUB6 RNU6-968P-201ENST00000384076 107 ntBASIC3.66□□□□□ -1.82
CCDC66A2RUB6 Y_RNA.551-201ENST00000384661 102 ntBASIC3.66□□□□□ -1.82
CCDC66A2RUB6 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC66A2RUB6 ATP5A1P2-201ENST00000412323 255 ntBASIC3.66□□□□□ -1.82
CCDC66A2RUB6 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC66A2RUB6 AC114482.1-201ENST00000418010 247 ntBASIC3.66□□□□□ -1.82
CCDC66A2RUB6 AL358453.1-201ENST00000422522 250 ntBASIC3.66□□□□□ -1.82
CCDC66A2RUB6 GOT2P5-201ENST00000433995 546 ntBASIC3.66□□□□□ -1.82
CCDC66A2RUB6 RN7SL75P-201ENST00000461926 281 ntBASIC3.66□□□□□ -1.82
CCDC66A2RUB6 Y_RNA.706-201ENST00000516933 99 ntBASIC3.66□□□□□ -1.82
CCDC66A2RUB6 AC009812.2-201ENST00000517657 457 ntBASIC3.66□□□□□ -1.82
CCDC66A2RUB6 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.66□□□□□ -1.82
CCDC66A2RUB6 AC091144.1-201ENST00000519573 138 ntBASIC3.66□□□□□ -1.82
CCDC66A2RUB6 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC66A2RUB6 AC078899.3-201ENST00000599065 212 ntBASIC3.66□□□□□ -1.82
CCDC66A2RUB6 RPL23AP78-201ENST00000599928 470 ntBASIC3.66□□□□□ -1.82
CCDC66A2RUB6 AL121772.2-201ENST00000614331 297 ntBASIC3.66□□□□□ -1.82
CCDC66A2RUB6 AC243829.7-201ENST00000633081 225 ntBASIC3.66□□□□□ -1.82
CCDC66A2RUB6 MIR3529-201ENST00000637713 78 ntBASIC3.66□□□□□ -1.82
CCDC66A2RUB6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC66A2RUB6 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC66A2RUB6 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC66A2RUB6 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC66A2RUB6 SNORD9-201ENST00000362566 104 ntBASIC3.65□□□□□ -1.83
CCDC66A2RUB6 RNA5SP51-201ENST00000364750 119 ntBASIC3.65□□□□□ -1.83
CCDC66A2RUB6 RNU1-140P-201ENST00000365040 165 ntBASIC3.65□□□□□ -1.83
CCDC66A2RUB6 SNORA51.11-201ENST00000384442 131 ntBASIC3.65□□□□□ -1.83
CCDC66A2RUB6 U8.11-201ENST00000384699 133 ntBASIC3.65□□□□□ -1.83
CCDC66A2RUB6 U8.12-201ENST00000384701 133 ntBASIC3.65□□□□□ -1.83
CCDC66A2RUB6 RNA5SP171-201ENST00000391071 115 ntBASIC3.65□□□□□ -1.83
CCDC66A2RUB6 SNORA26.7-201ENST00000391288 122 ntBASIC3.65□□□□□ -1.83
CCDC66A2RUB6 RPL21P2-201ENST00000440049 481 ntBASIC3.65□□□□□ -1.83
CCDC66A2RUB6 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC66A2RUB6 AC073910.1-201ENST00000445047 438 ntBASIC3.65□□□□□ -1.83
CCDC66A2RUB6 AC010099.1-201ENST00000455434 375 ntBASIC3.65□□□□□ -1.83
CCDC66A2RUB6 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC66A2RUB6 U8.18-201ENST00000459285 133 ntBASIC3.65□□□□□ -1.83
CCDC66A2RUB6 AC091153.1-201ENST00000466297 402 ntBASIC3.65□□□□□ -1.83
CCDC66A2RUB6 SNORA31.23-201ENST00000517219 133 ntBASIC3.65□□□□□ -1.83
CCDC66A2RUB6 AC107934.2-201ENST00000518653 310 ntBASIC3.65□□□□□ -1.83
CCDC66A2RUB6 AP000867.2-201ENST00000532468 320 ntBASIC3.65□□□□□ -1.83
CCDC66A2RUB6 MRPS36P4-201ENST00000534436 298 ntBASIC3.65□□□□□ -1.83
CCDC66A2RUB6 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC66A2RUB6 SCARNA4-201ENST00000629045 128 ntBASIC3.65□□□□□ -1.83
CCDC66A2RUB6 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC66A2RUB6 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC66A2RUB6 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC66A2RUB6 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC66A2RUB6 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC66A2RUB6 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC66A2RUB6 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC66A2RUB6 HAUS6P2-201ENST00000433254 2404 ntBASIC3.64□□□□□ -1.83
CCDC66A2RUB6 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC66A2RUB6 RNA5SP124-201ENST00000362739 110 ntBASIC3.64□□□□□ -1.83
CCDC66A2RUB6 Y_RNA.276-201ENST00000364732 109 ntBASIC3.64□□□□□ -1.83
CCDC66A2RUB6 SNORD32A-201ENST00000364805 84 ntBASIC3.64□□□□□ -1.83
CCDC66A2RUB6 RNU6-1286P-201ENST00000383871 107 ntBASIC3.64□□□□□ -1.83
CCDC66A2RUB6 RNU6-505P-201ENST00000384427 107 ntBASIC3.64□□□□□ -1.83
CCDC66A2RUB6 RNA5SP38-201ENST00000410750 119 ntBASIC3.64□□□□□ -1.83
CCDC66A2RUB6 AL139281.1-201ENST00000422120 335 ntBASIC3.64□□□□□ -1.83
CCDC66A2RUB6 RPL23AP95-201ENST00000426806 265 ntBASIC3.64□□□□□ -1.83
CCDC66A2RUB6 AL714022.1-201ENST00000439897 151 ntBASIC3.64□□□□□ -1.83
CCDC66A2RUB6 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC66A2RUB6 OSTCP8-201ENST00000445117 448 ntBASIC3.64□□□□□ -1.83
CCDC66A2RUB6 snoU13.30-201ENST00000458951 104 ntBASIC3.64□□□□□ -1.83
CCDC66A2RUB6 RN7SL499P-201ENST00000481141 276 ntBASIC3.64□□□□□ -1.83
CCDC66A2RUB6 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC66A2RUB6 ACA59.2-201ENST00000517061 156 ntBASIC3.64□□□□□ -1.83
CCDC66A2RUB6 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.64□□□□□ -1.83
CCDC66A2RUB6 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC66A2RUB6 MIR4444-1-201ENST00000581696 74 ntBASIC3.64□□□□□ -1.83
CCDC66A2RUB6 MIR4444-2-201ENST00000584390 74 ntBASIC3.64□□□□□ -1.83
CCDC66A2RUB6 RPS29P30-201ENST00000600975 111 ntBASIC3.64□□□□□ -1.83
CCDC66A2RUB6 AC006557.5-201ENST00000603126 811 ntBASIC3.64□□□□□ -1.83
CCDC66A2RUB6 AL390123.1-201ENST00000603216 237 ntBASIC3.64□□□□□ -1.83
CCDC66A2RUB6 AC008739.3-201ENST00000603262 127 ntBASIC3.64□□□□□ -1.83
CCDC66A2RUB6 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC66A2RUB6 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC66A2RUB6 MIR6075-201ENST00000620782 95 ntBASIC3.64□□□□□ -1.83
CCDC66A2RUB6 AC012442.3-202ENST00000636742 206 ntBASIC3.64□□□□□ -1.83
CCDC66A2RUB6 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.64□□□□□ -1.83
CCDC66A2RUB6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.63□□□□□ -1.83
CCDC66A2RUB6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC66A2RUB6 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC66A2RUB6 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC66A2RUB6 RNU6-198P-201ENST00000384258 104 ntBASIC3.63□□□□□ -1.83
CCDC66A2RUB6 RNU6-843P-201ENST00000384454 104 ntBASIC3.63□□□□□ -1.83
CCDC66A2RUB6 Y_RNA.556-201ENST00000384677 113 ntBASIC3.63□□□□□ -1.83
CCDC66A2RUB6 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC66A2RUB6 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC66A2RUB6 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC66A2RUB6 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC66A2RUB6 Z82188.1-201ENST00000436709 154 ntBASIC3.63□□□□□ -1.83
CCDC66A2RUB6 AL161651.1-201ENST00000440882 223 ntBASIC3.63□□□□□ -1.83
CCDC66A2RUB6 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC66A2RUB6 AC012308.1-201ENST00000451232 178 ntBASIC3.63□□□□□ -1.83
CCDC66A2RUB6 SNORD105B-201ENST00000458770 79 ntBASIC3.63□□□□□ -1.83
CCDC66A2RUB6 RPL23AP75-201ENST00000491601 451 ntBASIC3.63□□□□□ -1.83
CCDC66A2RUB6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms